RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 TERF2IPQ9NYB0 399 aa14.37□□□□□ -0.11
VARS2-213ENST00000625423 YEATS2Q9ULM3 1422 aa14.37□□□□□ -0.11
VARS2-213ENST00000625423 VIRMAQ69YN4 1812 aaKnown RBP14.37□□□□□ -0.11
VARS2-213ENST00000625423 CT47B1P0C2W7 299 aaPredicted RBP14.36□□□□□ -0.11
VARS2-213ENST00000625423 ATAD2Q6PL18 1390 aa14.36□□□□□ -0.11
VARS2-213ENST00000625423 PTPRMP28827 1452 aa14.36□□□□□ -0.11
VARS2-213ENST00000625423 NLRP1Q9C000 1473 aa14.36□□□□□ -0.11
VARS2-213ENST00000625423 COL3A1P02461 1466 aaPredicted RBP14.35□□□□□ -0.11
VARS2-213ENST00000625423 SSH1Q8WYL5 1049 aa14.35□□□□□ -0.11
VARS2-213ENST00000625423 TRIM27P14373 513 aa14.35□□□□□ -0.11
VARS2-213ENST00000625423 RIPK4P57078 832 aa14.34□□□□□ -0.11
VARS2-213ENST00000625423 BECN1Q14457 450 aa14.34□□□□□ -0.11
VARS2-213ENST00000625423 FBXO31Q5XUX0 539 aaPredicted RBP14.34□□□□□ -0.11
VARS2-213ENST00000625423 YTHDC2Q9H6S0 1430 aaKnown RBP14.34□□□□□ -0.11
VARS2-213ENST00000625423 UPF2Q9HAU5 1272 aaKnown RBP14.34□□□□□ -0.11
VARS2-213ENST00000625423 CD163L1Q9NR16 1453 aa14.34□□□□□ -0.11
VARS2-213ENST00000625423 RTN4Q9NQC3 1192 aaKnown RBP14.34□□□□□ -0.11
VARS2-213ENST00000625423 DIAPH1O60610 1272 aaKnown RBP14.33□□□□□ -0.11
VARS2-213ENST00000625423 HDGFL2Q7Z4V5 671 aaPredicted RBP14.33□□□□□ -0.12
VARS2-213ENST00000625423 ITPRIPQ8IWB1 547 aa14.33□□□□□ -0.12
VARS2-213ENST00000625423 CDK19Q9BWU1 502 aa14.33□□□□□ -0.12
VARS2-213ENST00000625423 CABP1Q9NZU7 370 aa14.33□□□□□ -0.12
VARS2-213ENST00000625423 ZMYM3Q14202 1370 aa14.33□□□□□ -0.12
VARS2-213ENST00000625423 TBC1D32Q96NH3 1257 aa14.33□□□□□ -0.12
VARS2-213ENST00000625423 SLKQ9H2G2 1235 aaPredicted RBP14.33□□□□□ -0.12
VARS2-213ENST00000625423 NOB1Q9ULX3 412 aaKnown RBP14.33□□□□□ -0.12
VARS2-213ENST00000625423 ATF7IPQ6VMQ6 1270 aa14.32□□□□□ -0.12
VARS2-213ENST00000625423 MYO5BQ9ULV0 1848 aa14.32□□□□□ -0.12
VARS2-213ENST00000625423 TMEM131LA2VDJ0 1609 aa14.32□□□□□ -0.12
VARS2-213ENST00000625423 TRHP20396 242 aaPredicted RBP14.31□□□□□ -0.12
VARS2-213ENST00000625423 IL16Q14005 1332 aa14.31□□□□□ -0.12
VARS2-213ENST00000625423 RICTORQ6R327 1708 aa14.31□□□□□ -0.12
VARS2-213ENST00000625423 DDX19BQ9UMR2 479 aa14.31□□□□□ -0.12
VARS2-213ENST00000625423 MED14O60244 1454 aa14.3□□□□□ -0.12
VARS2-213ENST00000625423 FBLN1P23142 703 aa14.3□□□□□ -0.12
VARS2-213ENST00000625423 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
VARS2-213ENST00000625423 BRPF3Q9ULD4 1205 aa14.3□□□□□ -0.12
VARS2-213ENST00000625423 PREX1Q8TCU6 1659 aa14.3□□□□□ -0.12
VARS2-213ENST00000625423 TMEM57Q8N5G2 664 aa14.3□□□□□ -0.12
VARS2-213ENST00000625423 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.29□□□□□ -0.12
VARS2-213ENST00000625423 PNPLA6Q8IY17 1366 aa14.29□□□□□ -0.12
VARS2-213ENST00000625423 HDAC1Q13547 482 aaPredicted RBP14.29□□□□□ -0.12
VARS2-213ENST00000625423 PNNQ9H307 717 aaKnown RBP14.28□□□□□ -0.12
VARS2-213ENST00000625423 ESF1Q9H501 851 aaKnown RBP14.28□□□□□ -0.12
VARS2-213ENST00000625423 TBC1D2Q9BYX2 928 aa14.28□□□□□ -0.12
VARS2-213ENST00000625423 ARHGEF40Q8TER5 1519 aa14.28□□□□□ -0.12
VARS2-213ENST00000625423 ALKQ9UM73 1620 aa14.28□□□□□ -0.12
VARS2-213ENST00000625423 FCHSD2O94868 740 aa14.27□□□□□ -0.13
VARS2-213ENST00000625423 WAPLQ7Z5K2 1190 aa14.27□□□□□ -0.13
VARS2-213ENST00000625423 CLTCQ00610 1675 aaKnown RBP14.27□□□□□ -0.13
VARS2-213ENST00000625423 PRKAR2BP31323 418 aa14.26□□□□□ -0.13
VARS2-213ENST00000625423 ANTXR1Q9H6X2 564 aa14.26□□□□□ -0.13
VARS2-213ENST00000625423 ZBTB40Q9NUA8 1239 aa14.26□□□□□ -0.13
VARS2-213ENST00000625423 ANKRD26Q9UPS8 1709 aa14.26□□□□□ -0.13
VARS2-213ENST00000625423 KIF16BQ96L93 1317 aa14.26□□□□□ -0.13
VARS2-213ENST00000625423 POLKQ9UBT6 870 aa14.26□□□□□ -0.13
VARS2-213ENST00000625423 IPO8O15397 1037 aaKnown RBP14.25□□□□□ -0.13
VARS2-213ENST00000625423 MFAP1P55081 439 aaKnown RBP14.25□□□□□ -0.13
VARS2-213ENST00000625423 RSPH6AQ9H0K4 717 aa14.25□□□□□ -0.13
VARS2-213ENST00000625423 SMC5Q8IY18 1101 aa14.25□□□□□ -0.13
VARS2-213ENST00000625423 HMOX1P09601 288 aa14.24□□□□□ -0.13
VARS2-213ENST00000625423 C22orf23Q9BZE7 217 aa14.24□□□□□ -0.13
VARS2-213ENST00000625423 ALDH1L2Q3SY69 923 aa14.23□□□□□ -0.13
VARS2-213ENST00000625423 SPRYD3Q8NCJ5 442 aa14.23□□□□□ -0.13
VARS2-213ENST00000625423 PHACTR3Q96KR7 559 aa14.23□□□□□ -0.13
VARS2-213ENST00000625423 LRRC7Q96NW7 1537 aa14.23□□□□□ -0.13
VARS2-213ENST00000625423 THUMPD2Q9BTF0 503 aaKnown RBP14.23□□□□□ -0.13
VARS2-213ENST00000625423 FAM135BQ49AJ0 1406 aa14.22□□□□□ -0.13
VARS2-213ENST00000625423 EMILIN1Q9Y6C2 1016 aa14.21□□□□□ -0.13
VARS2-213ENST00000625423 NFE2L2Q16236 605 aa14.21□□□□□ -0.13
VARS2-213ENST00000625423 KIF20BQ96Q89 1820 aa14.2□□□□□ -0.14
VARS2-213ENST00000625423 LNPKQ9C0E8 428 aa14.2□□□□□ -0.14
VARS2-213ENST00000625423 NUCB1Q02818 461 aa14.2□□□□□ -0.14
VARS2-213ENST00000625423 CDC42BPGQ6DT37 1551 aa14.2□□□□□ -0.14
VARS2-213ENST00000625423 TSPYL6Q8N831 410 aa14.19□□□□□ -0.14
VARS2-213ENST00000625423 VAMP4O75379 141 aa14.19□□□□□ -0.14
VARS2-213ENST00000625423 NME9Q86XW9 330 aa14.19□□□□□ -0.14
VARS2-213ENST00000625423 ZRANB1Q9UGI0 708 aa14.19□□□□□ -0.14
VARS2-213ENST00000625423 ELL2O00472 640 aaPredicted RBP14.19□□□□□ -0.14
VARS2-213ENST00000625423 ATP7BP35670 1465 aa14.19□□□□□ -0.14
VARS2-213ENST00000625423 A2ML1A8K2U0 1454 aa14.18□□□□□ -0.14
VARS2-213ENST00000625423 RIMS2Q9UQ26 1411 aa14.18□□□□□ -0.14
VARS2-213ENST00000625423 IL13P35225 146 aa14.18□□□□□ -0.14
VARS2-213ENST00000625423 BRPF1P55201 1214 aaPredicted RBP14.18□□□□□ -0.14
VARS2-213ENST00000625423 CHD1LQ86WJ1 897 aa14.18□□□□□ -0.14
VARS2-213ENST00000625423 MRPL50Q8N5N7 158 aaKnown RBP14.18□□□□□ -0.14
VARS2-213ENST00000625423 ZNF428Q96B54 188 aa14.18□□□□□ -0.14
VARS2-213ENST00000625423 C1orf115Q9H7X2 142 aa14.17□□□□□ -0.14
VARS2-213ENST00000625423 DLC1Q96QB1 1528 aa14.17□□□□□ -0.14
VARS2-213ENST00000625423 WASLO00401 505 aaPredicted RBP14.17□□□□□ -0.14
VARS2-213ENST00000625423 ZBTB7BO15156 539 aaPredicted RBP14.17□□□□□ -0.14
VARS2-213ENST00000625423 PPIP5K1Q6PFW1 1433 aa14.17□□□□□ -0.14
VARS2-213ENST00000625423 MBIPQ9NS73 344 aa14.16□□□□□ -0.14
VARS2-213ENST00000625423 NCKAP5LQ9HCH0 1330 aa14.16□□□□□ -0.14
VARS2-213ENST00000625423 GNAI1P63096 354 aa14.16□□□□□ -0.14
VARS2-213ENST00000625423 CALD1Q05682 793 aaKnown RBP14.16□□□□□ -0.14
VARS2-213ENST00000625423 IFT57Q9NWB7 429 aa14.16□□□□□ -0.14
VARS2-213ENST00000625423 TXNDC2Q86VQ3 553 aa14.15□□□□□ -0.14
VARS2-213ENST00000625423 CPSF1Q10570 1443 aaKnown RBP14.15□□□□□ -0.14
VARS2-213ENST00000625423 EDC4Q6P2E9 1401 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms