RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 WDR63Q8IWG1 891 aa25.75■■□□□ 1.71
PCDHB11-202ENST00000624887 PNPLA6Q8IY17 1366 aa25.75■■□□□ 1.71
PCDHB11-202ENST00000624887 ANP32EQ9BTT0 268 aa25.75■■□□□ 1.71
PCDHB11-202ENST00000624887 RRP7AQ9Y3A4 280 aaKnown RBP25.75■■□□□ 1.71
PCDHB11-202ENST00000624887 NEUROD2Q15784 382 aa25.74■■□□□ 1.71
PCDHB11-202ENST00000624887 EDC4Q6P2E9 1401 aaKnown RBP25.74■■□□□ 1.71
PCDHB11-202ENST00000624887 CEP170BQ9Y4F5 1589 aaPredicted RBP25.74■■□□□ 1.71
PCDHB11-202ENST00000624887 NUDT16Q96DE0 195 aaKnown RBP25.73■■□□□ 1.71
PCDHB11-202ENST00000624887 ROBO2Q9HCK4 1378 aa25.72■■□□□ 1.71
PCDHB11-202ENST00000624887 CDC42BPGQ6DT37 1551 aa25.72■■□□□ 1.71
PCDHB11-202ENST00000624887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.72■■□□□ 1.71
PCDHB11-202ENST00000624887 CCDC61Q9Y6R9 512 aa25.71■■□□□ 1.71
PCDHB11-202ENST00000624887 PLEKHF1Q96S99 279 aa25.69■■□□□ 1.7
PCDHB11-202ENST00000624887 MON2Q7Z3U7 1717 aa25.69■■□□□ 1.7
PCDHB11-202ENST00000624887 U2SURPO15042 1029 aaKnown RBP25.68■■□□□ 1.7
PCDHB11-202ENST00000624887 FANCIQ9NVI1 1328 aa25.68■■□□□ 1.7
PCDHB11-202ENST00000624887 DIAPH1O60610 1272 aaKnown RBP25.67■■□□□ 1.7
PCDHB11-202ENST00000624887 AKAP12Q02952 1782 aa25.67■■□□□ 1.7
PCDHB11-202ENST00000624887 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.66■■□□□ 1.7
PCDHB11-202ENST00000624887 BCAR3O75815 825 aa25.66■■□□□ 1.7
PCDHB11-202ENST00000624887 ITSN1Q15811 1721 aa25.65■■□□□ 1.7
PCDHB11-202ENST00000624887 POLKQ9UBT6 870 aa25.65■■□□□ 1.7
PCDHB11-202ENST00000624887 ZNF142P52746 1687 aaPredicted RBP25.65■■□□□ 1.7
PCDHB11-202ENST00000624887 PRR36Q9H6K5 1346 aa25.64■■□□□ 1.69
PCDHB11-202ENST00000624887 MAP2P11137 1827 aaKnown RBP25.64■■□□□ 1.69
PCDHB11-202ENST00000624887 NCKAP5LQ9HCH0 1330 aa25.63■■□□□ 1.69
PCDHB11-202ENST00000624887 SLC26A8Q96RN1 970 aa25.63■■□□□ 1.69
PCDHB11-202ENST00000624887 TBX22Q9Y458 520 aa25.63■■□□□ 1.69
PCDHB11-202ENST00000624887 PTPRUQ92729 1446 aa25.63■■□□□ 1.69
PCDHB11-202ENST00000624887 ZNF692Q9BU19 519 aaPredicted RBP25.62■■□□□ 1.69
PCDHB11-202ENST00000624887 PNNQ9H307 717 aaKnown RBP25.62■■□□□ 1.69
PCDHB11-202ENST00000624887 SETD1BQ9UPS6 1966 aaKnown RBP25.62■■□□□ 1.69
PCDHB11-202ENST00000624887 MAPK8IP3Q9UPT6 1336 aa25.61■■□□□ 1.69
PCDHB11-202ENST00000624887 TMPOP42166 694 aaKnown RBP25.61■■□□□ 1.69
PCDHB11-202ENST00000624887 NME9Q86XW9 330 aa25.61■■□□□ 1.69
PCDHB11-202ENST00000624887 MYH16Q9H6N6 1097 aa25.6■■□□□ 1.69
PCDHB11-202ENST00000624887 AATKQ6ZMQ8 1374 aa25.6■■□□□ 1.69
PCDHB11-202ENST00000624887 TOPAZ1Q8N9V7 1692 aa25.6■■□□□ 1.69
PCDHB11-202ENST00000624887 DIP2AQ14689 1571 aa25.59■■□□□ 1.69
PCDHB11-202ENST00000624887 TCERG1O14776 1098 aaKnown RBP25.58■■□□□ 1.69
PCDHB11-202ENST00000624887 PDE3AQ14432 1141 aa25.58■■□□□ 1.69
PCDHB11-202ENST00000624887 FCHSD2O94868 740 aa25.57■■□□□ 1.68
PCDHB11-202ENST00000624887 FBLN1P23142 703 aa25.57■■□□□ 1.68
PCDHB11-202ENST00000624887 RARSP54136 660 aaKnown RBP25.56■■□□□ 1.68
PCDHB11-202ENST00000624887 COG3Q96JB2 828 aa25.56■■□□□ 1.68
PCDHB11-202ENST00000624887 TRIM35Q9UPQ4 493 aa25.56■■□□□ 1.68
PCDHB11-202ENST00000624887 CDK12Q9NYV4 1490 aaPredicted RBP25.56■■□□□ 1.68
PCDHB11-202ENST00000624887 KDM2BQ8NHM5 1336 aa25.56■■□□□ 1.68
PCDHB11-202ENST00000624887 PTCH1Q13635 1447 aa25.56■■□□□ 1.68
PCDHB11-202ENST00000624887 ANKLE2Q86XL3 938 aa25.56■■□□□ 1.68
PCDHB11-202ENST00000624887 PPM1GO15355 546 aaPredicted RBP25.55■■□□□ 1.68
PCDHB11-202ENST00000624887 ZRANB1Q9UGI0 708 aa25.55■■□□□ 1.68
PCDHB11-202ENST00000624887 AMOTL2Q9Y2J4 779 aa25.55■■□□□ 1.68
PCDHB11-202ENST00000624887 LRRC7Q96NW7 1537 aa25.55■■□□□ 1.68
PCDHB11-202ENST00000624887 PLEKHG3A1L390 1219 aa25.55■■□□□ 1.68
PCDHB11-202ENST00000624887 NRKQ7Z2Y5 1582 aa25.54■■□□□ 1.68
PCDHB11-202ENST00000624887 EMILIN1Q9Y6C2 1016 aa25.53■■□□□ 1.68
PCDHB11-202ENST00000624887 CENPQQ7L2Z9 268 aaPredicted RBP25.53■■□□□ 1.68
PCDHB11-202ENST00000624887 IL16Q14005 1332 aa25.53■■□□□ 1.68
PCDHB11-202ENST00000624887 RSPH6AQ9H0K4 717 aa25.52■■□□□ 1.68
PCDHB11-202ENST00000624887 MS4A1P11836 297 aa25.51■■□□□ 1.67
PCDHB11-202ENST00000624887 CT47B1P0C2W7 299 aaPredicted RBP25.51■■□□□ 1.67
PCDHB11-202ENST00000624887 RIPK4P57078 832 aa25.51■■□□□ 1.67
PCDHB11-202ENST00000624887 ACEP12821 1306 aa25.5■■□□□ 1.67
PCDHB11-202ENST00000624887 CANXP27824 592 aaKnown RBP25.5■■□□□ 1.67
PCDHB11-202ENST00000624887 IL13P35225 146 aa25.49■■□□□ 1.67
PCDHB11-202ENST00000624887 TTC21BQ7Z4L5 1316 aa25.49■■□□□ 1.67
PCDHB11-202ENST00000624887 PIK3R4Q99570 1358 aa25.48■■□□□ 1.67
PCDHB11-202ENST00000624887 XRN1Q8IZH2 1706 aaKnown RBP25.48■■□□□ 1.67
PCDHB11-202ENST00000624887 PRKAR2BP31323 418 aa25.47■■□□□ 1.67
PCDHB11-202ENST00000624887 USP6P35125 1406 aa25.47■■□□□ 1.67
PCDHB11-202ENST00000624887 NEFMP07197 916 aa25.46■■□□□ 1.67
PCDHB11-202ENST00000624887 MSH5O43196 834 aa25.45■■□□□ 1.67
PCDHB11-202ENST00000624887 FRAT1Q92837 279 aaPredicted RBP25.45■■□□□ 1.67
PCDHB11-202ENST00000624887 TSR2Q969E8 191 aaKnown RBP25.45■■□□□ 1.67
PCDHB11-202ENST00000624887 NUTM2FA1L443 756 aa25.45■■□□□ 1.66
PCDHB11-202ENST00000624887 OVOS2A0A0J9YW53 1432 aa25.44■■□□□ 1.66
PCDHB11-202ENST00000624887 OVOS2Q6IE36 1432 aa25.44■■□□□ 1.66
PCDHB11-202ENST00000624887 RRS1Q15050 365 aaKnown RBP25.44■■□□□ 1.66
PCDHB11-202ENST00000624887 PANK1Q8TE04 598 aa25.44■■□□□ 1.66
PCDHB11-202ENST00000624887 SSH2Q76I76 1423 aa25.43■■□□□ 1.66
PCDHB11-202ENST00000624887 HMOX1P09601 288 aa25.42■■□□□ 1.66
PCDHB11-202ENST00000624887 EXOSC9Q06265 439 aaKnown RBP25.42■■□□□ 1.66
PCDHB11-202ENST00000624887 COG6Q9Y2V7 657 aa25.42■■□□□ 1.66
PCDHB11-202ENST00000624887 NALCNQ8IZF0 1738 aa25.41■■□□□ 1.66
PCDHB11-202ENST00000624887 NFE2L2Q16236 605 aa25.41■■□□□ 1.66
PCDHB11-202ENST00000624887 AAMPQ13685 434 aa25.4■■□□□ 1.66
PCDHB11-202ENST00000624887 PHACTR3Q96KR7 559 aa25.4■■□□□ 1.66
PCDHB11-202ENST00000624887 BCL2L13Q9BXK5 485 aa25.4■■□□□ 1.66
PCDHB11-202ENST00000624887 CLUAP1Q96AJ1 413 aa25.4■■□□□ 1.66
PCDHB11-202ENST00000624887 NPHP4O75161 1426 aaPredicted RBP25.39■■□□□ 1.66
PCDHB11-202ENST00000624887 PDE4AP27815 886 aa25.39■■□□□ 1.66
PCDHB11-202ENST00000624887 KCNA6P17658 529 aa25.38■■□□□ 1.65
PCDHB11-202ENST00000624887 BACH2Q9BYV9 841 aa25.38■■□□□ 1.65
PCDHB11-202ENST00000624887 TTC21AQ8NDW8 1320 aa25.38■■□□□ 1.65
PCDHB11-202ENST00000624887 USP31Q70CQ4 1352 aa25.38■■□□□ 1.65
PCDHB11-202ENST00000624887 SKAP1Q86WV1 359 aa25.37■■□□□ 1.65
PCDHB11-202ENST00000624887 RGPD8O14715 1765 aaPredicted RBP25.37■■□□□ 1.65
PCDHB11-202ENST00000624887 RLBP1P12271 317 aa25.36■■□□□ 1.65
PCDHB11-202ENST00000624887 ANKARQ7Z5J8 1434 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms