RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 FAM83GA6ND36 823 aa22.28■■□□□ 1.16
LINC00221-202ENST00000619530 RGS12O14924 1447 aa22.28■■□□□ 1.16
LINC00221-202ENST00000619530 EVC2Q86UK5 1308 aa22.28■■□□□ 1.16
LINC00221-202ENST00000619530 PPIP5K1Q6PFW1 1433 aa22.27■■□□□ 1.16
LINC00221-202ENST00000619530 GJD4Q96KN9 370 aaPredicted RBP22.27■■□□□ 1.16
LINC00221-202ENST00000619530 CABP1Q9NZU7 370 aa22.27■■□□□ 1.16
LINC00221-202ENST00000619530 ALS2Q96Q42 1657 aa22.27■■□□□ 1.15
LINC00221-202ENST00000619530 POLR3AO14802 1390 aaPredicted RBP22.26■■□□□ 1.15
LINC00221-202ENST00000619530 CCDC9Q9Y3X0 531 aaKnown RBP22.26■■□□□ 1.15
LINC00221-202ENST00000619530 UPF1Q92900 1129 aaKnown RBP eCLIP22.25■■□□□ 1.157e-6■■■■□ 24.4
LINC00221-202ENST00000619530 TOPAZ1Q8N9V7 1692 aa22.25■■□□□ 1.15
LINC00221-202ENST00000619530 ABCA3Q99758 1704 aa22.24■■□□□ 1.15
LINC00221-202ENST00000619530 SLIT2O94813 1529 aa22.24■■□□□ 1.15
LINC00221-202ENST00000619530 ABTB2Q8N961 1025 aa22.23■■□□□ 1.15
LINC00221-202ENST00000619530 BTG4Q9NY30 223 aa22.21■■□□□ 1.15
LINC00221-202ENST00000619530 ZC3H6P61129 1189 aaKnown RBP22.19■■□□□ 1.14
LINC00221-202ENST00000619530 VPS72Q15906 364 aa22.19■■□□□ 1.14
LINC00221-202ENST00000619530 PRDM11Q9NQV5 511 aa22.19■■□□□ 1.14
LINC00221-202ENST00000619530 PLCH1Q4KWH8 1693 aa22.18■■□□□ 1.14
LINC00221-202ENST00000619530 RALGAPBQ86X10 1494 aa22.18■■□□□ 1.14
LINC00221-202ENST00000619530 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.18■■□□□ 1.14
LINC00221-202ENST00000619530 CHRNA2Q15822 529 aa22.17■■□□□ 1.14
LINC00221-202ENST00000619530 KIAA0232Q92628 1395 aa22.15■■□□□ 1.14
LINC00221-202ENST00000619530 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
LINC00221-202ENST00000619530 NWD2Q9ULI1 1742 aa22.14■■□□□ 1.14
LINC00221-202ENST00000619530 GLI3P10071 1580 aa22.13■■□□□ 1.13
LINC00221-202ENST00000619530 CRYBG1Q9Y4K1 1723 aa22.13■■□□□ 1.13
LINC00221-202ENST00000619530 COL14A1Q05707 1796 aaKnown RBP22.13■■□□□ 1.13
LINC00221-202ENST00000619530 ATAD2Q6PL18 1390 aa22.12■■□□□ 1.13
LINC00221-202ENST00000619530 A0A0G2JS52 829 aa22.12■■□□□ 1.13
LINC00221-202ENST00000619530 NLRP6P59044 892 aa22.12■■□□□ 1.13
LINC00221-202ENST00000619530 MYT1Q01538 1121 aa22.12■■□□□ 1.13
LINC00221-202ENST00000619530 SEPT12Q8IYM1 358 aa22.12■■□□□ 1.13
LINC00221-202ENST00000619530 USP6P35125 1406 aa22.11■■□□□ 1.13
LINC00221-202ENST00000619530 ZBTB7CA1YPR0 619 aa22.11■■□□□ 1.13
LINC00221-202ENST00000619530 TMC1Q8TDI8 760 aa22.11■■□□□ 1.13
LINC00221-202ENST00000619530 ZNF692Q9BU19 519 aaPredicted RBP22.11■■□□□ 1.13
LINC00221-202ENST00000619530 STRN4Q9NRL3 753 aa22.11■■□□□ 1.13
LINC00221-202ENST00000619530 PHRF1Q9P1Y6 1649 aaKnown RBP22.1■■□□□ 1.13
LINC00221-202ENST00000619530 GCP02774 474 aa22.09■■□□□ 1.13
LINC00221-202ENST00000619530 EVA1CP58658 441 aa22.09■■□□□ 1.13
LINC00221-202ENST00000619530 FAM98CQ17RN3 349 aaKnown RBP22.09■■□□□ 1.13
LINC00221-202ENST00000619530 ST20-MTHFSA0A0A6YYL1 179 aa22.09■■□□□ 1.13
LINC00221-202ENST00000619530 BRD4O60885 1362 aaPredicted RBP22.08■■□□□ 1.13
LINC00221-202ENST00000619530 NRAPQ86VF7 1730 aa22.07■■□□□ 1.12
LINC00221-202ENST00000619530 USP19O94966 1318 aa22.07■■□□□ 1.12
LINC00221-202ENST00000619530 TTC21BQ7Z4L5 1316 aa22.07■■□□□ 1.12
LINC00221-202ENST00000619530 SBNO2Q9Y2G9 1366 aa22.07■■□□□ 1.12
LINC00221-202ENST00000619530 CCER1Q8TC90 406 aaPredicted RBP22.06■■□□□ 1.12
LINC00221-202ENST00000619530 SPATA31A5Q5VU36 1347 aa22.06■■□□□ 1.12
LINC00221-202ENST00000619530 SPATA31A7Q8IWB4 1347 aa22.06■■□□□ 1.12
LINC00221-202ENST00000619530 KTN1Q86UP2 1357 aaKnown RBP22.06■■□□□ 1.12
LINC00221-202ENST00000619530 ONECUT3O60422 494 aaPredicted RBP22.05■■□□□ 1.12
LINC00221-202ENST00000619530 SLC12A5Q9H2X9 1139 aa22.05■■□□□ 1.12
LINC00221-202ENST00000619530 SOX12O15370 315 aa22.04■■□□□ 1.12
LINC00221-202ENST00000619530 BRWD3Q6RI45 1802 aa22.04■■□□□ 1.12
LINC00221-202ENST00000619530 SSH2Q76I76 1423 aa22.04■■□□□ 1.12
LINC00221-202ENST00000619530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.04■■□□□ 1.12
LINC00221-202ENST00000619530 USP35Q9P2H5 1018 aa22.03■■□□□ 1.12
LINC00221-202ENST00000619530 NRKQ7Z2Y5 1582 aa22.03■■□□□ 1.12
LINC00221-202ENST00000619530 KRT27Q7Z3Y8 459 aa22.03■■□□□ 1.12
LINC00221-202ENST00000619530 TESK2Q96S53 571 aa22.03■■□□□ 1.12
LINC00221-202ENST00000619530 AKAP12Q02952 1782 aa22.02■■□□□ 1.12
LINC00221-202ENST00000619530 HDGFL2Q7Z4V5 671 aaPredicted RBP22.02■■□□□ 1.12
LINC00221-202ENST00000619530 CPSF1Q10570 1443 aaKnown RBP22.01■■□□□ 1.11
LINC00221-202ENST00000619530 CLSPNQ9HAW4 1339 aa22.01■■□□□ 1.11
LINC00221-202ENST00000619530 TIMELESSQ9UNS1 1208 aa22.01■■□□□ 1.11
LINC00221-202ENST00000619530 CPDO75976 1380 aa22■■□□□ 1.11
LINC00221-202ENST00000619530 SPATA31A1Q5TZJ5 1347 aa22■■□□□ 1.11
LINC00221-202ENST00000619530 TTC21AQ8NDW8 1320 aa22■■□□□ 1.11
LINC00221-202ENST00000619530 LARP1Q6PKG0 1096 aaKnown RBP22■■□□□ 1.11
LINC00221-202ENST00000619530 ZRANB1Q9UGI0 708 aa22■■□□□ 1.11
LINC00221-202ENST00000619530 PIK3C2AO00443 1686 aa22■■□□□ 1.11
LINC00221-202ENST00000619530 CAMTA1Q9Y6Y1 1673 aa21.99■■□□□ 1.11
LINC00221-202ENST00000619530 TERF2IPQ9NYB0 399 aa21.98■■□□□ 1.11
LINC00221-202ENST00000619530 USP47Q96K76 1375 aa21.98■■□□□ 1.11
LINC00221-202ENST00000619530 FAM182BQ5T319 152 aa21.96■■□□□ 1.11
LINC00221-202ENST00000619530 NME9Q86XW9 330 aa21.96■■□□□ 1.11
LINC00221-202ENST00000619530 CCDC125Q86Z20 511 aa21.96■■□□□ 1.11
LINC00221-202ENST00000619530 PUS7Q96PZ0 661 aaKnown RBP21.96■■□□□ 1.11
LINC00221-202ENST00000619530 SLC24A1O60721 1099 aa21.96■■□□□ 1.11
LINC00221-202ENST00000619530 TMF1P82094 1093 aa21.95■■□□□ 1.1
LINC00221-202ENST00000619530 KCNH5Q8NCM2 988 aa21.95■■□□□ 1.1
LINC00221-202ENST00000619530 CD163L1Q9NR16 1453 aa21.95■■□□□ 1.1
LINC00221-202ENST00000619530 SLIT3O75094 1523 aa21.94■■□□□ 1.1
LINC00221-202ENST00000619530 EP400Q96L91 3159 aa21.93■■□□□ 1.1
LINC00221-202ENST00000619530 MON2Q7Z3U7 1717 aa21.93■■□□□ 1.1
LINC00221-202ENST00000619530 LMO7Q8WWI1 1683 aa21.92■■□□□ 1.1
LINC00221-202ENST00000619530 AATKQ6ZMQ8 1374 aa21.92■■□□□ 1.1
LINC00221-202ENST00000619530 SF3B2Q13435 895 aaKnown RBP21.92■■□□□ 1.1
LINC00221-202ENST00000619530 TCP11L2Q8N4U5 519 aa21.92■■□□□ 1.1
LINC00221-202ENST00000619530 AXIN2Q9Y2T1 843 aa21.92■■□□□ 1.1
LINC00221-202ENST00000619530 A0A1W2PP64 1363 aa21.91■■□□□ 1.1
LINC00221-202ENST00000619530 ARHGEF25Q86VW2 580 aa21.91■■□□□ 1.1
LINC00221-202ENST00000619530 BLMP54132 1417 aaPredicted RBP21.9■■□□□ 1.1
LINC00221-202ENST00000619530 TOM1L2Q6ZVM7 507 aa21.9■■□□□ 1.1
LINC00221-202ENST00000619530 COL5A2P05997 1499 aaPredicted RBP21.89■■□□□ 1.1
LINC00221-202ENST00000619530 BARGINQ6ZT62 677 aa21.89■■□□□ 1.09
LINC00221-202ENST00000619530 DEFB132Q7Z7B7 95 aa21.89■■□□□ 1.09
LINC00221-202ENST00000619530 EDC4Q6P2E9 1401 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms