RNA–Protein interactions for RNA: ENST00000619199.4

ATP13A3-211, Transcript of ATPase 13A3, humanhuman

TSL 2 BASIC

Gene ATP13A3, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-211ENST00000619199 PDCL3Q9H2J4 239 aa5.73□□□□□ -1.49
ATP13A3-211ENST00000619199 C9orf78Q9NZ63 289 aaPredicted RBP5.73□□□□□ -1.49
ATP13A3-211ENST00000619199 HIP1O00291 1037 aa5.73□□□□□ -1.49
ATP13A3-211ENST00000619199 ERLIN1O75477 346 aa5.73□□□□□ -1.49
ATP13A3-211ENST00000619199 CLCN1P35523 988 aa5.73□□□□□ -1.49
ATP13A3-211ENST00000619199 PAXIP1Q6ZW49 1069 aaPredicted RBP5.73□□□□□ -1.49
ATP13A3-211ENST00000619199 JMYQ8N9B5 988 aa5.73□□□□□ -1.49
ATP13A3-211ENST00000619199 EIF3JO75822 258 aaKnown RBP5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 ANO2Q9NQ90 1003 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 BICRAQ9NZM4 1560 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 STK26Q9P289 416 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 ANKRD30AQ9BXX3 1397 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 RILPL2Q969X0 211 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 SLC26A8Q96RN1 970 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 SMC3Q9UQE7 1217 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 NINLQ9Y2I6 1382 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 GOLGA6L10A0A0M3HER8 536 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 TBC1D2BQ9UPU7 963 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 ABCA5Q8WWZ7 1642 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 GGT6Q6P531 493 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 SPATA24Q86W54 205 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 CCDC39Q9UFE4 941 aa5.72□□□□□ -1.49
ATP13A3-211ENST00000619199 EPB41L2O43491 1005 aaKnown RBP5.71□□□□□ -1.49
ATP13A3-211ENST00000619199 CT47B1P0C2W7 299 aaPredicted RBP5.71□□□□□ -1.49
ATP13A3-211ENST00000619199 PDCP20941 246 aa5.71□□□□□ -1.49
ATP13A3-211ENST00000619199 ZKSCAN2Q63HK3 967 aa5.71□□□□□ -1.49
ATP13A3-211ENST00000619199 ZNF526Q8TF50 670 aaPredicted RBP5.71□□□□□ -1.49
ATP13A3-211ENST00000619199 COG3Q96JB2 828 aa5.71□□□□□ -1.49
ATP13A3-211ENST00000619199 SMC2O95347 1197 aa5.71□□□□□ -1.49
ATP13A3-211ENST00000619199 HMGN5P82970 282 aaKnown RBP5.71□□□□□ -1.49
ATP13A3-211ENST00000619199 CFAP57Q96MR6 1250 aa5.71□□□□□ -1.49
ATP13A3-211ENST00000619199 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.71□□□□□ -1.49
ATP13A3-211ENST00000619199 ANKRD62A6NC57 917 aa5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 KRT18P05783 430 aaKnown RBP5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 JAKMIP3Q5VZ66 844 aa5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 DYDC1Q8WWB3 177 aa5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 ZMYND15Q9H091 742 aa5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 HMGXB3Q12766 1538 aa5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 INTS3Q68E01 1043 aaKnown RBP5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 FBXW7Q969H0 707 aa5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 ZNF396Q96N95 335 aaPredicted RBP5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 GNL3LQ9NVN8 582 aaKnown RBP5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 DDX19BQ9UMR2 479 aa5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 SLC4A3P48751 1232 aa5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 MCM2P49736 904 aa5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 ENOX2Q16206 610 aaKnown RBP5.71□□□□□ -1.5
ATP13A3-211ENST00000619199 IKQ13123 557 aaPredicted RBP5.7□□□□□ -1.5
ATP13A3-211ENST00000619199 NOL8Q76FK4 1167 aaKnown RBP5.7□□□□□ -1.5
ATP13A3-211ENST00000619199 CRBNQ96SW2 442 aa5.7□□□□□ -1.5
ATP13A3-211ENST00000619199 BMP2KQ9NSY1 1161 aaPredicted RBP5.7□□□□□ -1.5
ATP13A3-211ENST00000619199 DZIP1LQ8IYY4 767 aaKnown RBP5.7□□□□□ -1.5
ATP13A3-211ENST00000619199 IFT57Q9NWB7 429 aa5.7□□□□□ -1.5
ATP13A3-211ENST00000619199 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATP13A3-211ENST00000619199 V9GYY5 206 aaPredicted RBP5.7□□□□□ -1.5
ATP13A3-211ENST00000619199 HECW1Q76N89 1606 aa5.7□□□□□ -1.5
ATP13A3-211ENST00000619199 TEX14Q8IWB6 1497 aa5.7□□□□□ -1.5
ATP13A3-211ENST00000619199 SAFB2Q14151 953 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATP13A3-211ENST00000619199 CCDC57Q2TAC2 916 aa5.7□□□□□ -1.5
ATP13A3-211ENST00000619199 ZMYM4Q5VZL5 1548 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 CBFA2T2O43439 604 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 MBD3O95983 291 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 SF3B2Q13435 895 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 AXDND1Q5T1B0 1012 aaPredicted RBP5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 ERC1Q8IUD2 1116 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 EHBP1L1Q8N3D4 1523 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 PABPN1LA6NDY0 278 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 CCDC181Q5TID7 509 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 CLASRPQ8N2M8 674 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 STAC3Q96MF2 364 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 PLEKHH2Q8IVE3 1493 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 POLR3GO15318 223 aaPredicted RBP5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 DDX12PQ92771 950 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 GBP3Q9H0R5 595 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 THOC2Q8NI27 1593 aaKnown RBP5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 CADPSQ9ULU8 1353 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 MRE11P49959 708 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 LRRC45Q96CN5 670 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 SDF4Q9BRK5 362 aa5.69□□□□□ -1.5
ATP13A3-211ENST00000619199 KINO60870 393 aaKnown RBP5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 ANKRD45Q5TZF3 282 aa5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 GIGYF2Q6Y7W6 1299 aaKnown RBP5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 ZNF710Q8N1W2 664 aa5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 BCCIPQ9P287 314 aaKnown RBP eCLIP5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 NOL7Q9UMY1 257 aaKnown RBP5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 TCOF1Q13428 1488 aaKnown RBP5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 EVC2Q86UK5 1308 aa5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 MPHOSPH10O00566 681 aaKnown RBP5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 VGFO15240 615 aaPredicted RBP5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 PPP1R12BO60237 982 aaPredicted RBP5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 MCM3P25205 808 aa5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 C8orf34Q49A92 452 aa5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 KDM2BQ8NHM5 1336 aa5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 HOOK3Q86VS8 718 aa5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 PLCD4Q9BRC7 762 aa5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 RRAGDQ9NQL2 400 aaPredicted RBP5.68□□□□□ -1.5
ATP13A3-211ENST00000619199 SUPT6HQ7KZ85 1726 aaKnown RBP5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 ESPNB1AK53 854 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 PKD2Q13563 968 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 TNIP1Q15025 636 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 303 ms