RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 SHPRHQ149N8 1683 aa16.83■□□□□ 0.29
TNFAIP3-209ENST00000619035 FMN2Q9NZ56 1722 aa16.83■□□□□ 0.28
TNFAIP3-209ENST00000619035 FBLN1P23142 703 aa16.82■□□□□ 0.28
TNFAIP3-209ENST00000619035 PPM1GO15355 546 aaPredicted RBP16.81■□□□□ 0.28
TNFAIP3-209ENST00000619035 ADGRL3Q9HAR2 1447 aa16.8■□□□□ 0.28
TNFAIP3-209ENST00000619035 APAF1O14727 1248 aa16.8■□□□□ 0.28
TNFAIP3-209ENST00000619035 C14orf37Q86TY3 774 aa16.8■□□□□ 0.28
TNFAIP3-209ENST00000619035 NGDNQ8NEJ9 315 aaKnown RBP16.8■□□□□ 0.28
TNFAIP3-209ENST00000619035 CDCA7LQ96GN5 454 aa16.8■□□□□ 0.28
TNFAIP3-209ENST00000619035 COG3Q96JB2 828 aa16.8■□□□□ 0.28
TNFAIP3-209ENST00000619035 NALCNQ8IZF0 1738 aa16.8■□□□□ 0.28
TNFAIP3-209ENST00000619035 RGPD8O14715 1765 aaPredicted RBP16.8■□□□□ 0.28
TNFAIP3-209ENST00000619035 HSPA2P54652 639 aa16.79■□□□□ 0.28
TNFAIP3-209ENST00000619035 PDE3BQ13370 1112 aa16.79■□□□□ 0.28
TNFAIP3-209ENST00000619035 PELP1Q8IZL8 1130 aaKnown RBP16.79■□□□□ 0.28
TNFAIP3-209ENST00000619035 USP6P35125 1406 aa16.79■□□□□ 0.28
TNFAIP3-209ENST00000619035 TTC21BQ7Z4L5 1316 aa16.79■□□□□ 0.28
TNFAIP3-209ENST00000619035 NRKQ7Z2Y5 1582 aa16.79■□□□□ 0.28
TNFAIP3-209ENST00000619035 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
TNFAIP3-209ENST00000619035 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.287e-7■■■■□ 23.3
TNFAIP3-209ENST00000619035 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
TNFAIP3-209ENST00000619035 LMTK3Q96Q04 1460 aa16.78■□□□□ 0.28
TNFAIP3-209ENST00000619035 NCOA3Q9Y6Q9 1424 aa16.77■□□□□ 0.28
TNFAIP3-209ENST00000619035 NGEFQ8N5V2 710 aa16.76■□□□□ 0.27
TNFAIP3-209ENST00000619035 POLKQ9UBT6 870 aa16.76■□□□□ 0.27
TNFAIP3-209ENST00000619035 TTC21AQ8NDW8 1320 aa16.76■□□□□ 0.27
TNFAIP3-209ENST00000619035 AATKQ6ZMQ8 1374 aa16.75■□□□□ 0.27
TNFAIP3-209ENST00000619035 SSH2Q76I76 1423 aa16.75■□□□□ 0.27
TNFAIP3-209ENST00000619035 COL3A1P02461 1466 aaPredicted RBP16.75■□□□□ 0.27
TNFAIP3-209ENST00000619035 TSHZ2Q9NRE2 1034 aa16.75■□□□□ 0.27
TNFAIP3-209ENST00000619035 EMILIN1Q9Y6C2 1016 aa16.75■□□□□ 0.27
TNFAIP3-209ENST00000619035 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
TNFAIP3-209ENST00000619035 DIAPH1O60610 1272 aaKnown RBP16.74■□□□□ 0.27
TNFAIP3-209ENST00000619035 RRS1Q15050 365 aaKnown RBP16.74■□□□□ 0.27
TNFAIP3-209ENST00000619035 NEUROD2Q15784 382 aa16.74■□□□□ 0.27
TNFAIP3-209ENST00000619035 PROSER2Q86WR7 435 aaPredicted RBP16.73■□□□□ 0.27
TNFAIP3-209ENST00000619035 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
TNFAIP3-209ENST00000619035 MAP2P11137 1827 aaKnown RBP16.73■□□□□ 0.27
TNFAIP3-209ENST00000619035 RRP7AQ9Y3A4 280 aaKnown RBP16.73■□□□□ 0.27
TNFAIP3-209ENST00000619035 SOX12O15370 315 aa16.72■□□□□ 0.27
TNFAIP3-209ENST00000619035 ZNF521Q96K83 1311 aa16.72■□□□□ 0.27
TNFAIP3-209ENST00000619035 GOLGA2Q08379 1002 aa16.72■□□□□ 0.27
TNFAIP3-209ENST00000619035 B4GALNT3Q6L9W6 998 aa16.71■□□□□ 0.27
TNFAIP3-209ENST00000619035 TCP11L2Q8N4U5 519 aa16.71■□□□□ 0.27
TNFAIP3-209ENST00000619035 OVOS2A0A0J9YW53 1432 aa16.7■□□□□ 0.26
TNFAIP3-209ENST00000619035 OVOS2Q6IE36 1432 aa16.7■□□□□ 0.26
TNFAIP3-209ENST00000619035 STRCQ7RTU9 1775 aa16.7■□□□□ 0.26
TNFAIP3-209ENST00000619035 ESCO1Q5FWF5 840 aa16.7■□□□□ 0.26
TNFAIP3-209ENST00000619035 PHF8Q9UPP1 1060 aa16.7■□□□□ 0.26
TNFAIP3-209ENST00000619035 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
TNFAIP3-209ENST00000619035 PPP4R2Q9NY27 417 aa16.7■□□□□ 0.26
TNFAIP3-209ENST00000619035 DCCP43146 1447 aa16.69■□□□□ 0.26
TNFAIP3-209ENST00000619035 USP31Q70CQ4 1352 aa16.69■□□□□ 0.26
TNFAIP3-209ENST00000619035 PAK3O75914 559 aaPredicted RBP16.69■□□□□ 0.26
TNFAIP3-209ENST00000619035 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
TNFAIP3-209ENST00000619035 RCAN3Q9UKA8 241 aa16.69■□□□□ 0.26
TNFAIP3-209ENST00000619035 IQSEC2Q5JU85 1478 aa16.69■□□□□ 0.26
TNFAIP3-209ENST00000619035 RNF123Q5XPI4 1314 aa16.68■□□□□ 0.26
TNFAIP3-209ENST00000619035 CDK12Q9NYV4 1490 aaPredicted RBP16.68■□□□□ 0.26
TNFAIP3-209ENST00000619035 NUTM2GQ5VZR2 741 aa16.67■□□□□ 0.26
TNFAIP3-209ENST00000619035 USP54Q70EL1 1684 aa16.67■□□□□ 0.26
TNFAIP3-209ENST00000619035 MAPK8IP3Q9UPT6 1336 aa16.67■□□□□ 0.26
TNFAIP3-209ENST00000619035 WWC1Q8IX03 1113 aa16.67■□□□□ 0.26
TNFAIP3-209ENST00000619035 LRRC7Q96NW7 1537 aa16.67■□□□□ 0.26
TNFAIP3-209ENST00000619035 STRCP1A6NGW2 1772 aa16.67■□□□□ 0.26
TNFAIP3-209ENST00000619035 ERICH6BQ5W0A0 696 aa16.66■□□□□ 0.26
TNFAIP3-209ENST00000619035 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
TNFAIP3-209ENST00000619035 NLRP6P59044 892 aa16.66■□□□□ 0.26
TNFAIP3-209ENST00000619035 DUSP27Q5VZP5 1158 aa16.66■□□□□ 0.26
TNFAIP3-209ENST00000619035 PNNQ9H307 717 aaKnown RBP16.66■□□□□ 0.26
TNFAIP3-209ENST00000619035 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
TNFAIP3-209ENST00000619035 PIK3C2AO00443 1686 aa16.65■□□□□ 0.26
TNFAIP3-209ENST00000619035 SLFN5Q08AF3 891 aa16.65■□□□□ 0.26
TNFAIP3-209ENST00000619035 PLEKHF1Q96S99 279 aa16.65■□□□□ 0.26
TNFAIP3-209ENST00000619035 HMOX1P09601 288 aa16.65■□□□□ 0.26
TNFAIP3-209ENST00000619035 ABTB2Q8N961 1025 aa16.65■□□□□ 0.26
TNFAIP3-209ENST00000619035 ORAI2Q96SN7 254 aa16.65■□□□□ 0.26
TNFAIP3-209ENST00000619035 PSME1Q06323 249 aa16.64■□□□□ 0.25
TNFAIP3-209ENST00000619035 KIF1AQ12756 1690 aa16.64■□□□□ 0.25
TNFAIP3-209ENST00000619035 TMEM94Q12767 1356 aa16.64■□□□□ 0.25
TNFAIP3-209ENST00000619035 IL13P35225 146 aa16.63■□□□□ 0.25
TNFAIP3-209ENST00000619035 E9PSI1 815 aa16.63■□□□□ 0.25
TNFAIP3-209ENST00000619035 PRKAR2BP31323 418 aa16.62■□□□□ 0.25
TNFAIP3-209ENST00000619035 RRP1P56182 461 aaKnown RBP16.62■□□□□ 0.25
TNFAIP3-209ENST00000619035 FCHSD2O94868 740 aa16.61■□□□□ 0.25
TNFAIP3-209ENST00000619035 XPCQ01831 940 aaPredicted RBP16.61■□□□□ 0.25
TNFAIP3-209ENST00000619035 C1orf167Q5SNV9 1468 aa16.61■□□□□ 0.25
TNFAIP3-209ENST00000619035 FOXO3O43524 673 aa16.61■□□□□ 0.25
TNFAIP3-209ENST00000619035 NEFMP07197 916 aa16.61■□□□□ 0.25
TNFAIP3-209ENST00000619035 ATF3P18847 181 aa16.61■□□□□ 0.25
TNFAIP3-209ENST00000619035 RSPH6AQ9H0K4 717 aa16.61■□□□□ 0.25
TNFAIP3-209ENST00000619035 MAP3K19Q56UN5 1328 aa16.6■□□□□ 0.25
TNFAIP3-209ENST00000619035 TMPOP42166 694 aaKnown RBP16.6■□□□□ 0.25
TNFAIP3-209ENST00000619035 HSP90AB2PQ58FF8 381 aa16.6■□□□□ 0.25
TNFAIP3-209ENST00000619035 CADPS2Q86UW7 1296 aa16.6■□□□□ 0.25
TNFAIP3-209ENST00000619035 KIF24Q5T7B8 1368 aa16.6■□□□□ 0.25
TNFAIP3-209ENST00000619035 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
TNFAIP3-209ENST00000619035 PEAK1Q9H792 1746 aa16.59■□□□□ 0.25
TNFAIP3-209ENST00000619035 PLIN1O60240 522 aa16.59■□□□□ 0.25
TNFAIP3-209ENST00000619035 EIF4A2Q14240 407 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms