RNA–Protein interactions for RNA: ENST00000618278.4

SLC6A6-207, Transcript of solute carrier family 6 member 6, humanhuman

TSL 5

Gene SLC6A6, Length 6,401 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-207ENST00000618278 SMC3Q9UQE7 1217 aa13.24□□□□□ -0.29
SLC6A6-207ENST00000618278 ZNF771Q7L3S4 317 aaPredicted RBP13.24□□□□□ -0.29
SLC6A6-207ENST00000618278 CCDC112Q8NEF3 446 aa13.24□□□□□ -0.29
SLC6A6-207ENST00000618278 BIRC2Q13490 618 aa13.23□□□□□ -0.29
SLC6A6-207ENST00000618278 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
SLC6A6-207ENST00000618278 DEF6Q9H4E7 631 aa13.23□□□□□ -0.29
SLC6A6-207ENST00000618278 CGNL1Q0VF96 1302 aa13.23□□□□□ -0.29
SLC6A6-207ENST00000618278 DIAPH1O60610 1272 aaKnown RBP13.23□□□□□ -0.29
SLC6A6-207ENST00000618278 PRDM11Q9NQV5 511 aa13.23□□□□□ -0.29
SLC6A6-207ENST00000618278 RPGRQ92834 1020 aaKnown RBP13.22□□□□□ -0.29
SLC6A6-207ENST00000618278 DDX49Q9Y6V7 483 aaKnown RBP13.22□□□□□ -0.29
SLC6A6-207ENST00000618278 SIL1Q9H173 461 aa13.22□□□□□ -0.29
SLC6A6-207ENST00000618278 SSX2IPQ9Y2D8 614 aa13.22□□□□□ -0.29
SLC6A6-207ENST00000618278 ERLIN2O94905 339 aa13.22□□□□□ -0.29
SLC6A6-207ENST00000618278 RIPK4P57078 832 aa13.22□□□□□ -0.29
SLC6A6-207ENST00000618278 CEBPZQ03701 1054 aaKnown RBP13.22□□□□□ -0.29
SLC6A6-207ENST00000618278 FEZ1Q99689 392 aa13.22□□□□□ -0.29
SLC6A6-207ENST00000618278 MNS1Q8NEH6 495 aa13.21□□□□□ -0.29
SLC6A6-207ENST00000618278 POLR3DP05423 398 aaPredicted RBP13.21□□□□□ -0.29
SLC6A6-207ENST00000618278 TAF12Q16514 161 aa13.21□□□□□ -0.29
SLC6A6-207ENST00000618278 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.29
SLC6A6-207ENST00000618278 UBTFL1P0CB47 393 aaPredicted RBP13.21□□□□□ -0.3
SLC6A6-207ENST00000618278 ZNF408Q9H9D4 720 aa13.21□□□□□ -0.3
SLC6A6-207ENST00000618278 SMG6Q86US8 1419 aaKnown RBP13.2□□□□□ -0.3
SLC6A6-207ENST00000618278 ANKRD30AQ9BXX3 1397 aa13.2□□□□□ -0.3
SLC6A6-207ENST00000618278 FERMT2Q96AC1 680 aa13.2□□□□□ -0.3
SLC6A6-207ENST00000618278 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.2□□□□□ -0.35e-8■■■□□ 19
SLC6A6-207ENST00000618278 CENPHQ9H3R5 247 aa13.2□□□□□ -0.3
SLC6A6-207ENST00000618278 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
SLC6A6-207ENST00000618278 FMNL2Q96PY5 1086 aa13.2□□□□□ -0.3
SLC6A6-207ENST00000618278 POTEJP0CG39 1038 aa13.19□□□□□ -0.3
SLC6A6-207ENST00000618278 CCDC96Q2M329 555 aa13.19□□□□□ -0.3
SLC6A6-207ENST00000618278 UBA5Q9GZZ9 404 aa13.19□□□□□ -0.3
SLC6A6-207ENST00000618278 NOM1Q5C9Z4 860 aaKnown RBP13.19□□□□□ -0.3
SLC6A6-207ENST00000618278 ARL1P40616 181 aaPredicted RBP13.19□□□□□ -0.3
SLC6A6-207ENST00000618278 FKBP4Q02790 459 aaKnown RBP eCLIP13.19□□□□□ -0.3
SLC6A6-207ENST00000618278 TDO2P48775 406 aa13.18□□□□□ -0.3
SLC6A6-207ENST00000618278 SMC2O95347 1197 aa13.18□□□□□ -0.3
SLC6A6-207ENST00000618278 TEX35Q5T0J7 233 aa13.18□□□□□ -0.3
SLC6A6-207ENST00000618278 NACAP1Q9BZK3 213 aa13.18□□□□□ -0.3
SLC6A6-207ENST00000618278 LRP2BPQ9P2M1 347 aa13.18□□□□□ -0.3
SLC6A6-207ENST00000618278 DDX23Q9BUQ8 820 aaKnown RBP13.18□□□□□ -0.3
SLC6A6-207ENST00000618278 EPB41L2O43491 1005 aaKnown RBP13.18□□□□□ -0.3
SLC6A6-207ENST00000618278 SDF4Q9BRK5 362 aa13.18□□□□□ -0.3
SLC6A6-207ENST00000618278 RALBP1Q15311 655 aa13.18□□□□□ -0.3
SLC6A6-207ENST00000618278 FILIP1LQ4L180 1135 aa13.18□□□□□ -0.3
SLC6A6-207ENST00000618278 CCDC150Q8NCX0 1101 aa13.18□□□□□ -0.3
SLC6A6-207ENST00000618278 GOLGA3Q08378 1498 aa13.18□□□□□ -0.3
SLC6A6-207ENST00000618278 H0YHG0 523 aa13.17□□□□□ -0.3
SLC6A6-207ENST00000618278 IGHMBP2P38935 993 aaKnown RBP13.17□□□□□ -0.3
SLC6A6-207ENST00000618278 RBM26Q5T8P6 1007 aaKnown RBP13.17□□□□□ -0.3
SLC6A6-207ENST00000618278 ABCF2Q9UG63 623 aa13.17□□□□□ -0.3
SLC6A6-207ENST00000618278 FHAD1B1AJZ9 1412 aa13.17□□□□□ -0.3
SLC6A6-207ENST00000618278 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
SLC6A6-207ENST00000618278 ACBD3Q9H3P7 528 aa13.17□□□□□ -0.3
SLC6A6-207ENST00000618278 CCDC57Q2TAC2 916 aa13.17□□□□□ -0.3
SLC6A6-207ENST00000618278 IFT57Q9NWB7 429 aa13.16□□□□□ -0.3
SLC6A6-207ENST00000618278 SLC4A8Q2Y0W8 1093 aa13.16□□□□□ -0.3
SLC6A6-207ENST00000618278 C6orf229H3BNL8 230 aa13.16□□□□□ -0.3
SLC6A6-207ENST00000618278 HSP90B2PQ58FF3 399 aa13.16□□□□□ -0.3
SLC6A6-207ENST00000618278 ZKSCAN2Q63HK3 967 aa13.16□□□□□ -0.3
SLC6A6-207ENST00000618278 CUX2O14529 1486 aa13.15□□□□□ -0.3
SLC6A6-207ENST00000618278 SPG7Q9UQ90 795 aa13.15□□□□□ -0.3
SLC6A6-207ENST00000618278 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
SLC6A6-207ENST00000618278 STK3Q13188 491 aa13.15□□□□□ -0.3
SLC6A6-207ENST00000618278 TSPYL1Q9H0U9 437 aa13.15□□□□□ -0.3
SLC6A6-207ENST00000618278 NINLQ9Y2I6 1382 aa13.15□□□□□ -0.31
SLC6A6-207ENST00000618278 REC8O95072 547 aa13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 POLD1P28340 1107 aa13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 PLS1Q14651 629 aa13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 DZIP1LQ8IYY4 767 aaKnown RBP13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 CUL5Q93034 780 aa13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 ZNHIT6Q9NWK9 470 aaKnown RBP13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 DHX8Q14562 1220 aaKnown RBP13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 MPHOSPH9Q99550 1183 aa13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 MYO1BO43795 1136 aa13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 AXDND1Q5T1B0 1012 aaPredicted RBP13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 KIF20AO95235 890 aa13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 MAP4K4O95819 1239 aaPredicted RBP13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 PANK3Q9H999 370 aa13.14□□□□□ -0.31
SLC6A6-207ENST00000618278 NF2P35240 595 aa13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 ZC3H6P61129 1189 aaKnown RBP13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 SEC63Q9UGP8 760 aaKnown RBP13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 ST20-MTHFSA0A0A6YYL1 179 aa13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 MTHFSP49914 203 aa13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 STIM1Q13586 685 aa13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 MACROD2A1Z1Q3 448 aa13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 HSP90AA2PQ14568 343 aaPredicted RBP13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 NFKBIBQ15653 356 aa13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 CTNNBL1Q8WYA6 563 aaPredicted RBP13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 TRIM22Q8IYM9 498 aa13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 CLASRPQ8N2M8 674 aaKnown RBP13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 PUF60Q9UHX1 559 aaKnown RBP13.13□□□□□ -0.31
SLC6A6-207ENST00000618278 MPHOSPH6Q99547 160 aaKnown RBP13.12□□□□□ -0.31
SLC6A6-207ENST00000618278 SH3BP5O60239 455 aa13.12□□□□□ -0.31
SLC6A6-207ENST00000618278 NAT10Q9H0A0 1025 aaKnown RBP13.12□□□□□ -0.31
SLC6A6-207ENST00000618278 ATXN8OSP0DMR3 200 aa13.12□□□□□ -0.31
SLC6A6-207ENST00000618278 CARMIL1Q5VZK9 1371 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms