RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 NSD2O96028 1365 aa25.77■■□□□ 1.72
PCDHA13-203ENST00000617769 NCKAP5LQ9HCH0 1330 aa25.77■■□□□ 1.72
PCDHA13-203ENST00000617769 COG6Q9Y2V7 657 aa25.76■■□□□ 1.71
PCDHA13-203ENST00000617769 NRXN3Q9Y4C0 1643 aa25.76■■□□□ 1.71
PCDHA13-203ENST00000617769 SETD1AO15047 1707 aaKnown RBP25.76■■□□□ 1.71
PCDHA13-203ENST00000617769 TRHP20396 242 aaPredicted RBP25.74■■□□□ 1.71
PCDHA13-203ENST00000617769 FRAT1Q92837 279 aaPredicted RBP25.74■■□□□ 1.71
PCDHA13-203ENST00000617769 U2SURPO15042 1029 aaKnown RBP25.73■■□□□ 1.71
PCDHA13-203ENST00000617769 CLUAP1Q96AJ1 413 aa25.73■■□□□ 1.71
PCDHA13-203ENST00000617769 TMEM2Q9UHN6 1383 aa25.72■■□□□ 1.71
PCDHA13-203ENST00000617769 LTKP29376 864 aa25.72■■□□□ 1.71
PCDHA13-203ENST00000617769 DAXXQ9UER7 740 aaPredicted RBP25.72■■□□□ 1.71
PCDHA13-203ENST00000617769 IQSEC2Q5JU85 1478 aa25.71■■□□□ 1.71
PCDHA13-203ENST00000617769 HDGFP51858 240 aaKnown RBP25.71■■□□□ 1.71
PCDHA13-203ENST00000617769 PHF23Q9BUL5 403 aaPredicted RBP25.71■■□□□ 1.71
PCDHA13-203ENST00000617769 WASLO00401 505 aaPredicted RBP25.7■■□□□ 1.7
PCDHA13-203ENST00000617769 RARSP54136 660 aaKnown RBP25.7■■□□□ 1.7
PCDHA13-203ENST00000617769 DLC1Q96QB1 1528 aa25.7■■□□□ 1.7
PCDHA13-203ENST00000617769 NLRP1Q9C000 1473 aa25.69■■□□□ 1.7
PCDHA13-203ENST00000617769 SLC26A8Q96RN1 970 aa25.67■■□□□ 1.7
PCDHA13-203ENST00000617769 WDR63Q8IWG1 891 aa25.66■■□□□ 1.7
PCDHA13-203ENST00000617769 BCL2L13Q9BXK5 485 aa25.66■■□□□ 1.7
PCDHA13-203ENST00000617769 NUTM2FA1L443 756 aa25.65■■□□□ 1.7
PCDHA13-203ENST00000617769 ZRANB1Q9UGI0 708 aa25.65■■□□□ 1.7
PCDHA13-203ENST00000617769 UBR1Q8IWV7 1749 aa25.65■■□□□ 1.7
PCDHA13-203ENST00000617769 NUDT16Q96DE0 195 aaKnown RBP25.65■■□□□ 1.7
PCDHA13-203ENST00000617769 TNNQ9UQP3 1299 aa25.65■■□□□ 1.7
PCDHA13-203ENST00000617769 RLBP1P12271 317 aa25.64■■□□□ 1.69
PCDHA13-203ENST00000617769 PPIP5K1Q6PFW1 1433 aa25.63■■□□□ 1.69
PCDHA13-203ENST00000617769 NFKBIBQ15653 356 aa25.63■■□□□ 1.69
PCDHA13-203ENST00000617769 ROBO2Q9HCK4 1378 aa25.62■■□□□ 1.69
PCDHA13-203ENST00000617769 CCDC27Q2M243 656 aa25.62■■□□□ 1.69
PCDHA13-203ENST00000617769 NME9Q86XW9 330 aa25.62■■□□□ 1.69
PCDHA13-203ENST00000617769 ADAMTS13Q76LX8 1427 aa25.6■■□□□ 1.69
PCDHA13-203ENST00000617769 MAPK8IP3Q9UPT6 1336 aa25.6■■□□□ 1.69
PCDHA13-203ENST00000617769 PCDHB15Q9Y5E8 787 aa25.59■■□□□ 1.69
PCDHA13-203ENST00000617769 COL3A1P02461 1466 aaPredicted RBP25.58■■□□□ 1.69
PCDHA13-203ENST00000617769 VIRMAQ69YN4 1812 aaKnown RBP25.58■■□□□ 1.69
PCDHA13-203ENST00000617769 DIAPH1O60610 1272 aaKnown RBP25.58■■□□□ 1.69
PCDHA13-203ENST00000617769 PLEKHF1Q96S99 279 aa25.58■■□□□ 1.69
PCDHA13-203ENST00000617769 PRR36Q9H6K5 1346 aa25.57■■□□□ 1.68
PCDHA13-203ENST00000617769 POLKQ9UBT6 870 aa25.57■■□□□ 1.68
PCDHA13-203ENST00000617769 USP19O94966 1318 aa25.57■■□□□ 1.68
PCDHA13-203ENST00000617769 MED14O60244 1454 aa25.57■■□□□ 1.68
PCDHA13-203ENST00000617769 SEC24BO95487 1268 aa25.57■■□□□ 1.68
PCDHA13-203ENST00000617769 CCDC61Q9Y6R9 512 aa25.57■■□□□ 1.68
PCDHA13-203ENST00000617769 ATP7BP35670 1465 aa25.56■■□□□ 1.68
PCDHA13-203ENST00000617769 MYH16Q9H6N6 1097 aa25.56■■□□□ 1.68
PCDHA13-203ENST00000617769 PMFBP1Q8TBY8 1022 aa25.55■■□□□ 1.68
PCDHA13-203ENST00000617769 EMILIN1Q9Y6C2 1016 aa25.55■■□□□ 1.68
PCDHA13-203ENST00000617769 FAM135BQ49AJ0 1406 aa25.55■■□□□ 1.68
PCDHA13-203ENST00000617769 ANKRD26Q9UPS8 1709 aa25.55■■□□□ 1.68
PCDHA13-203ENST00000617769 TECPR2O15040 1411 aa25.54■■□□□ 1.68
PCDHA13-203ENST00000617769 CPSF1Q10570 1443 aaKnown RBP25.54■■□□□ 1.68
PCDHA13-203ENST00000617769 EID1Q9Y6B2 187 aa25.54■■□□□ 1.68
PCDHA13-203ENST00000617769 KIF20BQ96Q89 1820 aa25.54■■□□□ 1.68
PCDHA13-203ENST00000617769 TMPOP42166 694 aaKnown RBP25.53■■□□□ 1.68
PCDHA13-203ENST00000617769 AAMPQ13685 434 aa25.53■■□□□ 1.68
PCDHA13-203ENST00000617769 SIRT1Q96EB6 747 aa25.53■■□□□ 1.68
PCDHA13-203ENST00000617769 PLEKHG1Q9ULL1 1385 aa25.52■■□□□ 1.68
PCDHA13-203ENST00000617769 TSR2Q969E8 191 aaKnown RBP25.52■■□□□ 1.68
PCDHA13-203ENST00000617769 C3P01024 1663 aa25.51■■□□□ 1.67
PCDHA13-203ENST00000617769 ADGRB2O60241 1585 aa25.5■■□□□ 1.67
PCDHA13-203ENST00000617769 PNPLA6Q8IY17 1366 aa25.5■■□□□ 1.67
PCDHA13-203ENST00000617769 PTPRUQ92729 1446 aa25.5■■□□□ 1.67
PCDHA13-203ENST00000617769 RRS1Q15050 365 aaKnown RBP25.5■■□□□ 1.67
PCDHA13-203ENST00000617769 NCBP3Q53F19 620 aaKnown RBP25.5■■□□□ 1.67
PCDHA13-203ENST00000617769 TRIM35Q9UPQ4 493 aa25.5■■□□□ 1.67
PCDHA13-203ENST00000617769 CPS1P31327 1500 aa25.5■■□□□ 1.67
PCDHA13-203ENST00000617769 EDC4Q6P2E9 1401 aaKnown RBP25.49■■□□□ 1.67
PCDHA13-203ENST00000617769 HMOX1P09601 288 aa25.49■■□□□ 1.67
PCDHA13-203ENST00000617769 GSE1Q14687 1217 aa25.48■■□□□ 1.67
PCDHA13-203ENST00000617769 AMOTL2Q9Y2J4 779 aa25.48■■□□□ 1.67
PCDHA13-203ENST00000617769 PDZRN3Q9UPQ7 1066 aa25.48■■□□□ 1.67
PCDHA13-203ENST00000617769 KNDC1Q76NI1 1749 aa25.48■■□□□ 1.67
PCDHA13-203ENST00000617769 RIPK4P57078 832 aa25.47■■□□□ 1.67
PCDHA13-203ENST00000617769 MVPQ14764 893 aaKnown RBP25.46■■□□□ 1.67
PCDHA13-203ENST00000617769 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.46■■□□□ 1.67
PCDHA13-203ENST00000617769 FRAT2O75474 233 aaPredicted RBP25.46■■□□□ 1.67
PCDHA13-203ENST00000617769 COG3Q96JB2 828 aa25.46■■□□□ 1.67
PCDHA13-203ENST00000617769 PRKAR2BP31323 418 aa25.45■■□□□ 1.67
PCDHA13-203ENST00000617769 ZKSCAN2Q63HK3 967 aa25.45■■□□□ 1.67
PCDHA13-203ENST00000617769 IL27Q8NEV9 243 aa25.45■■□□□ 1.67
PCDHA13-203ENST00000617769 RWDD1Q9H446 243 aaPredicted RBP25.45■■□□□ 1.67
PCDHA13-203ENST00000617769 FTSJ3Q8IY81 847 aaKnown RBP25.45■■□□□ 1.66
PCDHA13-203ENST00000617769 FER1L4A9Z1Z3 1794 aa25.44■■□□□ 1.66
PCDHA13-203ENST00000617769 EXOSC9Q06265 439 aaKnown RBP25.44■■□□□ 1.66
PCDHA13-203ENST00000617769 DZIP1LQ8IYY4 767 aaKnown RBP25.44■■□□□ 1.66
PCDHA13-203ENST00000617769 CDC42BPGQ6DT37 1551 aa25.44■■□□□ 1.66
PCDHA13-203ENST00000617769 MAP2P11137 1827 aaKnown RBP25.43■■□□□ 1.66
PCDHA13-203ENST00000617769 ACEP12821 1306 aa25.43■■□□□ 1.66
PCDHA13-203ENST00000617769 THEMISQ8N1K5 641 aaPredicted RBP25.43■■□□□ 1.66
PCDHA13-203ENST00000617769 PHACTR3Q96KR7 559 aa25.42■■□□□ 1.66
PCDHA13-203ENST00000617769 SMC4Q9NTJ3 1288 aa25.42■■□□□ 1.66
PCDHA13-203ENST00000617769 RSPH6AQ9H0K4 717 aa25.42■■□□□ 1.66
PCDHA13-203ENST00000617769 SOX12O15370 315 aa25.41■■□□□ 1.66
PCDHA13-203ENST00000617769 FCHSD2O94868 740 aa25.4■■□□□ 1.66
PCDHA13-203ENST00000617769 CT47B1P0C2W7 299 aaPredicted RBP25.4■■□□□ 1.66
PCDHA13-203ENST00000617769 ZNF692Q9BU19 519 aaPredicted RBP25.4■■□□□ 1.66
PCDHA13-203ENST00000617769 SSH1Q8WYL5 1049 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms