RNA–Protein interactions for RNA: ENST00000616983.4

GYPA-212, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GYPA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-212ENST00000616983 PCDH10Q9P2E7 1040 aa7.79□□□□□ -1.16
GYPA-212ENST00000616983 KRBA2Q6ZNG9 492 aa7.78□□□□□ -1.16
GYPA-212ENST00000616983 IRF2BPLQ9H1B7 796 aa7.78□□□□□ -1.16
GYPA-212ENST00000616983 CABP2Q9NPB3 220 aa7.78□□□□□ -1.16
GYPA-212ENST00000616983 NLRP2Q9NX02 1062 aa7.78□□□□□ -1.16
GYPA-212ENST00000616983 CCDC146Q8IYE0 955 aa7.78□□□□□ -1.16
GYPA-212ENST00000616983 COL4A3BPQ9Y5P4 624 aa7.78□□□□□ -1.16
GYPA-212ENST00000616983 VAC14Q08AM6 782 aa7.77□□□□□ -1.17
GYPA-212ENST00000616983 OS9Q13438 667 aaPredicted RBP7.77□□□□□ -1.17
GYPA-212ENST00000616983 MRPL58Q14197 206 aaKnown RBP7.77□□□□□ -1.17
GYPA-212ENST00000616983 DIXDC1Q155Q3 683 aa7.77□□□□□ -1.17
GYPA-212ENST00000616983 L3MBTL3Q96JM7 780 aaPredicted RBP7.77□□□□□ -1.17
GYPA-212ENST00000616983 GJD4Q96KN9 370 aaPredicted RBP7.77□□□□□ -1.17
GYPA-212ENST00000616983 IQSEC3Q9UPP2 1182 aaPredicted RBP7.77□□□□□ -1.17
GYPA-212ENST00000616983 GPR37L1O60883 481 aa7.77□□□□□ -1.17
GYPA-212ENST00000616983 ZNF746Q6NUN9 644 aaPredicted RBP7.77□□□□□ -1.17
GYPA-212ENST00000616983 ZNF710Q8N1W2 664 aa7.77□□□□□ -1.17
GYPA-212ENST00000616983 RBL2Q08999 1139 aa7.76□□□□□ -1.17
GYPA-212ENST00000616983 TUSC1Q2TAM9 212 aa7.76□□□□□ -1.17
GYPA-212ENST00000616983 LDLRAD1Q5T700 205 aa7.76□□□□□ -1.17
GYPA-212ENST00000616983 RNF187Q5TA31 235 aaPredicted RBP7.76□□□□□ -1.17
GYPA-212ENST00000616983 MAMSTRQ6ZN01 415 aa7.76□□□□□ -1.17
GYPA-212ENST00000616983 ZSWIM4Q9H7M6 989 aa7.76□□□□□ -1.17
GYPA-212ENST00000616983 SLAIN2Q9P270 581 aa7.76□□□□□ -1.17
GYPA-212ENST00000616983 HSD3B2P26439 372 aa7.76□□□□□ -1.17
GYPA-212ENST00000616983 KANK4Q5T7N3 995 aaPredicted RBP7.76□□□□□ -1.17
GYPA-212ENST00000616983 JAZF1Q86VZ6 243 aa7.76□□□□□ -1.17
GYPA-212ENST00000616983 HOXA2O43364 376 aa7.75□□□□□ -1.17
GYPA-212ENST00000616983 METTL16Q86W50 562 aaKnown RBP7.75□□□□□ -1.17
GYPA-212ENST00000616983 PCDH12Q9NPG4 1184 aa7.75□□□□□ -1.17
GYPA-212ENST00000616983 PRR7Q8TB68 274 aa7.75□□□□□ -1.17
GYPA-212ENST00000616983 PNISRQ8TF01 805 aaKnown RBP7.75□□□□□ -1.17
GYPA-212ENST00000616983 LZTS3O60299 673 aaPredicted RBP7.74□□□□□ -1.17
GYPA-212ENST00000616983 AP1G2O75843 785 aa7.74□□□□□ -1.17
GYPA-212ENST00000616983 RHBDL3P58872 404 aa7.74□□□□□ -1.17
GYPA-212ENST00000616983 ASTLQ6HA08 431 aaPredicted RBP7.74□□□□□ -1.17
GYPA-212ENST00000616983 TBC1D9Q6ZT07 1266 aa7.74□□□□□ -1.17
GYPA-212ENST00000616983 NT5DC4Q86YG4 428 aa7.74□□□□□ -1.17
GYPA-212ENST00000616983 RPUSD2Q8IZ73 545 aaKnown RBP7.74□□□□□ -1.17
GYPA-212ENST00000616983 USP17L8P0C7I0 530 aa7.74□□□□□ -1.17
GYPA-212ENST00000616983 TBX4P57082 545 aa7.74□□□□□ -1.17
GYPA-212ENST00000616983 PMFBP1Q8TBY8 1022 aa7.74□□□□□ -1.17
GYPA-212ENST00000616983 GMLQ99445 158 aa7.74□□□□□ -1.17
GYPA-212ENST00000616983 GNL3LQ9NVN8 582 aaKnown RBP7.74□□□□□ -1.17
GYPA-212ENST00000616983 NEFMP07197 916 aa7.73□□□□□ -1.17
GYPA-212ENST00000616983 COL19A1Q14993 1142 aa7.73□□□□□ -1.17
GYPA-212ENST00000616983 RIC3Q7Z5B4 369 aa7.73□□□□□ -1.17
GYPA-212ENST00000616983 TMC2Q8TDI7 906 aa7.73□□□□□ -1.17
GYPA-212ENST00000616983 NOVA2Q9UNW9 492 aaKnown RBP7.73□□□□□ -1.17
GYPA-212ENST00000616983 C11orf96Q7Z7L8 435 aa7.73□□□□□ -1.17
GYPA-212ENST00000616983 DMGDHQ9UI17 866 aaKnown RBP7.73□□□□□ -1.17
GYPA-212ENST00000616983 METRNQ9UJH8 293 aa7.73□□□□□ -1.17
GYPA-212ENST00000616983 EXOC5O00471 708 aa7.72□□□□□ -1.17
GYPA-212ENST00000616983 BIRC2Q13490 618 aa7.72□□□□□ -1.17
GYPA-212ENST00000616983 SLC39A7Q92504 469 aa7.72□□□□□ -1.17
GYPA-212ENST00000616983 IFT57Q9NWB7 429 aa7.72□□□□□ -1.17
GYPA-212ENST00000616983 G3BP2Q9UN86 482 aaKnown RBP7.72□□□□□ -1.17
GYPA-212ENST00000616983 PRIM1P49642 420 aaKnown RBP7.72□□□□□ -1.17
GYPA-212ENST00000616983 BMS1Q14692 1282 aaKnown RBP7.72□□□□□ -1.17
GYPA-212ENST00000616983 ASB16Q96NS5 453 aa7.72□□□□□ -1.17
GYPA-212ENST00000616983 TGIF2Q9GZN2 237 aa7.72□□□□□ -1.17
GYPA-212ENST00000616983 PRR12Q9ULL5 1215 aa7.72□□□□□ -1.17
GYPA-212ENST00000616983 COMMD10Q9Y6G5 202 aa7.72□□□□□ -1.17
GYPA-212ENST00000616983 ATP9BO43861 1147 aa7.71□□□□□ -1.18
GYPA-212ENST00000616983 POTEJP0CG39 1038 aa7.71□□□□□ -1.18
GYPA-212ENST00000616983 SOX11P35716 441 aa7.71□□□□□ -1.18
GYPA-212ENST00000616983 STAG1Q8WVM7 1258 aa7.71□□□□□ -1.18
GYPA-212ENST00000616983 RPS6KC1Q96S38 1066 aa7.71□□□□□ -1.18
GYPA-212ENST00000616983 CAPN10Q9HC96 672 aa7.71□□□□□ -1.18
GYPA-212ENST00000616983 ATMINO43313 823 aaPredicted RBP7.71□□□□□ -1.18
GYPA-212ENST00000616983 TRIM34Q9BYJ4 488 aa7.71□□□□□ -1.18
GYPA-212ENST00000616983 DDX56Q9NY93 547 aaKnown RBP7.71□□□□□ -1.18
GYPA-212ENST00000616983 DSG2Q14126 1118 aa7.7□□□□□ -1.18
GYPA-212ENST00000616983 SOGA3Q5TF21 947 aa7.7□□□□□ -1.18
GYPA-212ENST00000616983 BSDC1Q9NW68 430 aaPredicted RBP7.7□□□□□ -1.18
GYPA-212ENST00000616983 WDHD1O75717 1129 aaPredicted RBP7.7□□□□□ -1.18
GYPA-212ENST00000616983 S100BP04271 92 aaPredicted RBP7.7□□□□□ -1.18
GYPA-212ENST00000616983 PTGER2P43116 358 aa7.7□□□□□ -1.18
GYPA-212ENST00000616983 MYBPC2Q14324 1141 aa7.7□□□□□ -1.18
GYPA-212ENST00000616983 WDR78Q5VTH9 848 aa7.7□□□□□ -1.18
GYPA-212ENST00000616983 FILIP1Q7Z7B0 1213 aa7.7□□□□□ -1.18
GYPA-212ENST00000616983 MS4A3Q96HJ5 214 aa7.7□□□□□ -1.18
GYPA-212ENST00000616983 CLP1Q92989 425 aaKnown RBP7.69□□□□□ -1.18
GYPA-212ENST00000616983 OSBPL2Q9H1P3 480 aa7.69□□□□□ -1.18
GYPA-212ENST00000616983 CCER2I3L3R5 266 aa7.69□□□□□ -1.18
GYPA-212ENST00000616983 LIG1P18858 919 aa7.69□□□□□ -1.18
GYPA-212ENST00000616983 PPP4CP60510 307 aa7.69□□□□□ -1.18
GYPA-212ENST00000616983 SCYL1Q96KG9 808 aa7.69□□□□□ -1.18
GYPA-212ENST00000616983 SENP7Q9BQF6 1050 aa7.69□□□□□ -1.18
GYPA-212ENST00000616983 MRPL42Q9Y6G3 142 aaKnown RBP7.69□□□□□ -1.18
GYPA-212ENST00000616983 SPTLC1O15269 473 aa7.68□□□□□ -1.18
GYPA-212ENST00000616983 KIF4AO95239 1232 aa7.68□□□□□ -1.18
GYPA-212ENST00000616983 PTMAP06454 111 aaKnown RBP7.68□□□□□ -1.18
GYPA-212ENST00000616983 GYS2P54840 703 aa7.68□□□□□ -1.18
GYPA-212ENST00000616983 XPCQ01831 940 aaPredicted RBP7.68□□□□□ -1.18
GYPA-212ENST00000616983 FAM69CQ0P6D2 419 aa7.68□□□□□ -1.18
GYPA-212ENST00000616983 EAPPQ56P03 285 aaPredicted RBP7.68□□□□□ -1.18
GYPA-212ENST00000616983 PPP1R18Q6NYC8 613 aa7.68□□□□□ -1.18
GYPA-212ENST00000616983 FMNL3Q8IVF7 1028 aa7.68□□□□□ -1.18
GYPA-212ENST00000616983 CCSER2Q9H7U1 834 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms