RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 DEPDC5O75140 1603 aa11.03□□□□□ -0.64
MALAT1-208ENST00000616527 BHMG1C9JSJ3 638 aaPredicted RBP11.03□□□□□ -0.64
MALAT1-208ENST00000616527 ARID4BQ4LE39 1312 aaPredicted RBP11.03□□□□□ -0.64
MALAT1-208ENST00000616527 KANK1Q14678 1352 aa11.03□□□□□ -0.64
MALAT1-208ENST00000616527 HSPA5P11021 654 aaKnown RBP11.02□□□□□ -0.65
MALAT1-208ENST00000616527 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
MALAT1-208ENST00000616527 RALGAPBQ86X10 1494 aa11.01□□□□□ -0.65
MALAT1-208ENST00000616527 LMTK2Q8IWU2 1503 aa11.01□□□□□ -0.65
MALAT1-208ENST00000616527 KCNV2Q8TDN2 545 aa11.01□□□□□ -0.65
MALAT1-208ENST00000616527 NEURL4Q96JN8 1562 aa11.01□□□□□ -0.65
MALAT1-208ENST00000616527 PRDM15P57071 1507 aaPredicted RBP11□□□□□ -0.65
MALAT1-208ENST00000616527 GRXCR2A6NFK2 248 aa11□□□□□ -0.65
MALAT1-208ENST00000616527 CCER2I3L3R5 266 aa11□□□□□ -0.65
MALAT1-208ENST00000616527 MAP3K7O43318 606 aa10.99□□□□□ -0.65
MALAT1-208ENST00000616527 DDX10Q13206 875 aaKnown RBP10.99□□□□□ -0.65
MALAT1-208ENST00000616527 A2MP01023 1474 aa10.99□□□□□ -0.65
MALAT1-208ENST00000616527 RIMBP3CA6NJZ7 1639 aa10.98□□□□□ -0.65
MALAT1-208ENST00000616527 RIMBP3BA6NNM3 1639 aa10.98□□□□□ -0.65
MALAT1-208ENST00000616527 RIMBP3Q9UFD9 1639 aa10.98□□□□□ -0.65
MALAT1-208ENST00000616527 PROX2Q3B8N5 592 aa10.98□□□□□ -0.65
MALAT1-208ENST00000616527 RABGEF1Q9UJ41 708 aa10.98□□□□□ -0.65
MALAT1-208ENST00000616527 GPRASP1Q5JY77 1395 aa10.98□□□□□ -0.65
MALAT1-208ENST00000616527 BCORL1Q5H9F3 1711 aa10.98□□□□□ -0.65
MALAT1-208ENST00000616527 KIDINS220Q9ULH0 1771 aa10.98□□□□□ -0.65
MALAT1-208ENST00000616527 ONECUT3O60422 494 aaPredicted RBP10.97□□□□□ -0.65
MALAT1-208ENST00000616527 CYB5RLQ6IPT4 315 aa10.97□□□□□ -0.65
MALAT1-208ENST00000616527 MRPL50Q8N5N7 158 aaKnown RBP10.97□□□□□ -0.65
MALAT1-208ENST00000616527 NBPF3Q9H094 633 aa10.97□□□□□ -0.65
MALAT1-208ENST00000616527 TRPM2O94759 1503 aa10.97□□□□□ -0.65
MALAT1-208ENST00000616527 MAP3K4Q9Y6R4 1608 aa10.97□□□□□ -0.65
MALAT1-208ENST00000616527 TET3O43151 1660 aa10.97□□□□□ -0.65
MALAT1-208ENST00000616527 RNF17Q9BXT8 1623 aaKnown RBP10.96□□□□□ -0.65
MALAT1-208ENST00000616527 PRAG1Q86YV5 1406 aa10.96□□□□□ -0.65
MALAT1-208ENST00000616527 CCDC7Q96M83 1385 aa10.96□□□□□ -0.65
MALAT1-208ENST00000616527 WASHC2AQ641Q2 1341 aa10.96□□□□□ -0.65
MALAT1-208ENST00000616527 OSBPP22059 807 aa10.96□□□□□ -0.65
MALAT1-208ENST00000616527 TSR1Q2NL82 804 aaKnown RBP10.96□□□□□ -0.65
MALAT1-208ENST00000616527 KCTD12Q96CX2 325 aaKnown RBP10.96□□□□□ -0.65
MALAT1-208ENST00000616527 HCSTQ9UBK5 93 aa10.96□□□□□ -0.65
MALAT1-208ENST00000616527 HECW2Q9P2P5 1572 aa10.95□□□□□ -0.66
MALAT1-208ENST00000616527 KIF3BO15066 747 aa10.95□□□□□ -0.66
MALAT1-208ENST00000616527 PRIM1P49642 420 aaKnown RBP10.95□□□□□ -0.66
MALAT1-208ENST00000616527 MROH1Q8NDA8 1641 aa10.95□□□□□ -0.66
MALAT1-208ENST00000616527 USP47Q96K76 1375 aa10.94□□□□□ -0.66
MALAT1-208ENST00000616527 ANP32CO43423 234 aa10.94□□□□□ -0.66
MALAT1-208ENST00000616527 DCAF11Q8TEB1 546 aa10.94□□□□□ -0.66
MALAT1-208ENST00000616527 GOLGA8CPA6NN73 597 aa10.93□□□□□ -0.66
MALAT1-208ENST00000616527 KIAA1468Q9P260 1216 aa10.93□□□□□ -0.66
MALAT1-208ENST00000616527 ROCK2O75116 1388 aaKnown RBP10.92□□□□□ -0.66
MALAT1-208ENST00000616527 LAMC1P11047 1609 aa10.92□□□□□ -0.66
MALAT1-208ENST00000616527 FRMPD1Q5SYB0 1578 aa10.92□□□□□ -0.66
MALAT1-208ENST00000616527 TRIM6-TRIM34B2RNG4 842 aa10.92□□□□□ -0.66
MALAT1-208ENST00000616527 HIRIP3Q9BW71 556 aaPredicted RBP10.92□□□□□ -0.66
MALAT1-208ENST00000616527 ZMYM4Q5VZL5 1548 aa10.92□□□□□ -0.66
MALAT1-208ENST00000616527 CNTLNQ9NXG0 1405 aa10.92□□□□□ -0.66
MALAT1-208ENST00000616527 E9PCH4 1651 aa10.92□□□□□ -0.66
MALAT1-208ENST00000616527 EFCAB6Q5THR3 1501 aa10.91□□□□□ -0.66
MALAT1-208ENST00000616527 CERKQ8TCT0 537 aa10.91□□□□□ -0.66
MALAT1-208ENST00000616527 CARD11Q9BXL7 1154 aa10.91□□□□□ -0.66
MALAT1-208ENST00000616527 ARHGAP31Q2M1Z3 1444 aa10.91□□□□□ -0.66
MALAT1-208ENST00000616527 DIP2BQ9P265 1576 aa10.9□□□□□ -0.66
MALAT1-208ENST00000616527 LAPTM4BQ86VI4 370 aa10.9□□□□□ -0.66
MALAT1-208ENST00000616527 KIF7Q2M1P5 1343 aa10.89□□□□□ -0.67
MALAT1-208ENST00000616527 C11orf95C9JLR9 678 aaPredicted RBP10.89□□□□□ -0.67
MALAT1-208ENST00000616527 FAM69CQ0P6D2 419 aa10.89□□□□□ -0.67
MALAT1-208ENST00000616527 WNT2BQ93097 391 aa10.89□□□□□ -0.67
MALAT1-208ENST00000616527 MLLT3P42568 568 aaPredicted RBP10.88□□□□□ -0.67
MALAT1-208ENST00000616527 RICTORQ6R327 1708 aa10.88□□□□□ -0.67
MALAT1-208ENST00000616527 REREQ9P2R6 1566 aa10.88□□□□□ -0.67
MALAT1-208ENST00000616527 DIP2CQ9Y2E4 1556 aa10.88□□□□□ -0.67
MALAT1-208ENST00000616527 SPHKAPQ2M3C7 1700 aa10.87□□□□□ -0.67
MALAT1-208ENST00000616527 RAPGEF3O95398 923 aa10.87□□□□□ -0.67
MALAT1-208ENST00000616527 PRSS12P56730 875 aa10.87□□□□□ -0.67
MALAT1-208ENST00000616527 THSD4Q6ZMP0 1018 aa10.87□□□□□ -0.67
MALAT1-208ENST00000616527 PACS2Q86VP3 889 aa10.87□□□□□ -0.67
MALAT1-208ENST00000616527 TRPM1Q7Z4N2 1603 aa10.87□□□□□ -0.67
MALAT1-208ENST00000616527 ABCA6Q8N139 1617 aa10.87□□□□□ -0.67
MALAT1-208ENST00000616527 MYOM2P54296 1465 aa10.87□□□□□ -0.67
MALAT1-208ENST00000616527 POLR1AO95602 1720 aaPredicted RBP10.87□□□□□ -0.67
MALAT1-208ENST00000616527 RPGRIP1LQ68CZ1 1315 aa10.86□□□□□ -0.67
MALAT1-208ENST00000616527 NOS1P29475 1434 aa10.86□□□□□ -0.67
MALAT1-208ENST00000616527 ABCC3O15438 1527 aa10.86□□□□□ -0.67
MALAT1-208ENST00000616527 AGLP35573 1532 aa10.86□□□□□ -0.67
MALAT1-208ENST00000616527 CDCA7LQ96GN5 454 aa10.86□□□□□ -0.67
MALAT1-208ENST00000616527 CDHR5Q9HBB8 845 aa10.86□□□□□ -0.67
MALAT1-208ENST00000616527 TSKSQ9UJT2 592 aa10.86□□□□□ -0.67
MALAT1-208ENST00000616527 NPATQ14207 1427 aa10.85□□□□□ -0.67
MALAT1-208ENST00000616527 CLTCL1P53675 1640 aa10.85□□□□□ -0.67
MALAT1-208ENST00000616527 RGL3Q3MIN7 710 aa10.85□□□□□ -0.67
MALAT1-208ENST00000616527 ZNF326Q5BKZ1 582 aaKnown RBP10.85□□□□□ -0.67
MALAT1-208ENST00000616527 CEP152O94986 1710 aa10.84□□□□□ -0.67
MALAT1-208ENST00000616527 PTPN5P54829 565 aa10.84□□□□□ -0.67
MALAT1-208ENST00000616527 SEPT9Q9UHD8 586 aaPredicted RBP10.84□□□□□ -0.67
MALAT1-208ENST00000616527 NRXN1Q9ULB1 1477 aa10.84□□□□□ -0.67
MALAT1-208ENST00000616527 PPRC1Q5VV67 1664 aaKnown RBP10.84□□□□□ -0.67
MALAT1-208ENST00000616527 KTN1Q86UP2 1357 aaKnown RBP10.83□□□□□ -0.68
MALAT1-208ENST00000616527 ST20-MTHFSA0A0A6YYL1 179 aa10.83□□□□□ -0.68
MALAT1-208ENST00000616527 ANKK1Q8NFD2 765 aa10.83□□□□□ -0.68
MALAT1-208ENST00000616527 ZFRQ96KR1 1074 aaKnown RBP10.83□□□□□ -0.68
MALAT1-208ENST00000616527 WASHC2CQ9Y4E1 1318 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms