RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 NSD2O96028 1365 aa6.96□□□□□ -1.3
SYNCRIP-204ENST00000616122 ABCC2Q92887 1545 aa6.96□□□□□ -1.3
SYNCRIP-204ENST00000616122 SMC5Q8IY18 1101 aa6.96□□□□□ -1.3
SYNCRIP-204ENST00000616122 PTPRTO14522 1441 aa6.96□□□□□ -1.3
SYNCRIP-204ENST00000616122 RPAP2Q8IXW5 612 aaPredicted RBP6.96□□□□□ -1.3
SYNCRIP-204ENST00000616122 MAGI2Q86UL8 1455 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 CDC45O75419 566 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 ALDH1L2Q3SY69 923 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 NOL8Q76FK4 1167 aaKnown RBP6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 KDM2BQ8NHM5 1336 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 MCM4P33991 863 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 SEC24BO95487 1268 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 GNAI3P08754 354 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 IL16Q14005 1332 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 ASXL1Q8IXJ9 1541 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 DDX11L8A8MPP1 907 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 RILPL2Q969X0 211 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 WDR7Q9Y4E6 1490 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 HSP90AB2PQ58FF8 381 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 MCM10Q7L590 875 aa6.95□□□□□ -1.3
SYNCRIP-204ENST00000616122 FAM83GA6ND36 823 aa6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 CEBPAP49715 358 aaPredicted RBP6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 FGD1P98174 961 aa6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 TRMT2AQ8IZ69 625 aaKnown RBP6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 THEMISQ8N1K5 641 aaPredicted RBP6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 GAS2L2Q8NHY3 880 aa6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 TBC1D32Q96NH3 1257 aa6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 TRAK2O60296 914 aa6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 PTMAP06454 111 aaKnown RBP6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 CSB-PGBD3P0DP91 1061 aa6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 A0A0G2JS52 829 aa6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 ABTB2Q8N961 1025 aa6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 ZRANB1Q9UGI0 708 aa6.94□□□□□ -1.3
SYNCRIP-204ENST00000616122 VAMP4O75379 141 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 PLCB2Q00722 1185 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 HDAC1Q13547 482 aaPredicted RBP6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 ZNF518AQ6AHZ1 1483 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 HDGFL1Q5TGJ6 251 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 TSPYL6Q8N831 410 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 NPATQ14207 1427 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 CEP170Q5SW79 1584 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 SURF6O75683 361 aaKnown RBP6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 INTS3Q68E01 1043 aaKnown RBP6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 PPP6R1Q9UPN7 881 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 BMP2KLQ5H9B9 411 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 ARHGAP45Q92619 1136 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 NAP1L5Q96NT1 182 aaPredicted RBP6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 ZBTB40Q9NUA8 1239 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 MIS18AQ9NYP9 233 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 NCKAP5LQ9HCH0 1330 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 ATP10AO60312 1499 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 NEK4P51957 841 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 AEBP1Q8IUX7 1158 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 IFT57Q9NWB7 429 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 MBIPQ9NS73 344 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 EXOC6BQ9Y2D4 811 aa6.93□□□□□ -1.3
SYNCRIP-204ENST00000616122 A0A1W2PP64 1363 aa6.92□□□□□ -1.3
SYNCRIP-204ENST00000616122 ABCA8O94911 1581 aa6.92□□□□□ -1.3
SYNCRIP-204ENST00000616122 PSME1Q06323 249 aa6.92□□□□□ -1.3
SYNCRIP-204ENST00000616122 FOXD4L5Q5VV16 416 aaPredicted RBP6.92□□□□□ -1.3
SYNCRIP-204ENST00000616122 FOXD4L4Q8WXT5 416 aaPredicted RBP6.92□□□□□ -1.3
SYNCRIP-204ENST00000616122 C9orf78Q9NZ63 289 aaPredicted RBP6.92□□□□□ -1.3
SYNCRIP-204ENST00000616122 KIF21AQ7Z4S6 1674 aa6.92□□□□□ -1.3
SYNCRIP-204ENST00000616122 C8orf58Q8NAV2 365 aa6.92□□□□□ -1.3
SYNCRIP-204ENST00000616122 BLMP54132 1417 aaPredicted RBP6.92□□□□□ -1.3
SYNCRIP-204ENST00000616122 UBTFL1P0CB47 393 aaPredicted RBP6.92□□□□□ -1.3
SYNCRIP-204ENST00000616122 NUCB2P80303 420 aa6.92□□□□□ -1.3
SYNCRIP-204ENST00000616122 RABEP1Q15276 862 aa6.91□□□□□ -1.3
SYNCRIP-204ENST00000616122 FOXD4L6Q3SYB3 417 aaPredicted RBP6.91□□□□□ -1.3
SYNCRIP-204ENST00000616122 FOXD4L3Q6VB84 417 aaPredicted RBP6.91□□□□□ -1.3
SYNCRIP-204ENST00000616122 TRIM35Q9UPQ4 493 aa6.91□□□□□ -1.3
SYNCRIP-204ENST00000616122 AMOTL2Q9Y2J4 779 aa6.91□□□□□ -1.3
SYNCRIP-204ENST00000616122 GOLGA6L4A6NEF3 574 aa6.91□□□□□ -1.3
SYNCRIP-204ENST00000616122 SKOR2Q2VWA4 1001 aaPredicted RBP6.91□□□□□ -1.3
SYNCRIP-204ENST00000616122 F6X3S4 739 aa6.91□□□□□ -1.3
SYNCRIP-204ENST00000616122 KRT24Q2M2I5 525 aa6.91□□□□□ -1.3
SYNCRIP-204ENST00000616122 PHF23Q9BUL5 403 aaPredicted RBP6.91□□□□□ -1.3
SYNCRIP-204ENST00000616122 CIZ1Q9ULV3 898 aaPredicted RBP6.91□□□□□ -1.3
SYNCRIP-204ENST00000616122 ITSN2Q9NZM3 1697 aa6.9□□□□□ -1.3
SYNCRIP-204ENST00000616122 GNAI2P04899 355 aa6.9□□□□□ -1.3
SYNCRIP-204ENST00000616122 PTMSP20962 102 aa6.9□□□□□ -1.3
SYNCRIP-204ENST00000616122 CCDC30Q5VVM6 783 aa6.9□□□□□ -1.3
SYNCRIP-204ENST00000616122 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.9□□□□□ -1.3
SYNCRIP-204ENST00000616122 NCBP3Q53F19 620 aaKnown RBP6.9□□□□□ -1.3
SYNCRIP-204ENST00000616122 CLASRPQ8N2M8 674 aaKnown RBP6.9□□□□□ -1.3
SYNCRIP-204ENST00000616122 ACEP12821 1306 aa6.9□□□□□ -1.3
SYNCRIP-204ENST00000616122 MRE11P49959 708 aa6.9□□□□□ -1.31
SYNCRIP-204ENST00000616122 SRCIN1Q9C0H9 1055 aa6.9□□□□□ -1.31
SYNCRIP-204ENST00000616122 ZNF330Q9Y3S2 320 aaPredicted RBP6.9□□□□□ -1.31
SYNCRIP-204ENST00000616122 CCT4P50991 539 aaKnown RBP6.9□□□□□ -1.31
SYNCRIP-204ENST00000616122 IL1RAPL2Q9NP60 686 aa6.9□□□□□ -1.31
SYNCRIP-204ENST00000616122 NLRP2Q9NX02 1062 aa6.9□□□□□ -1.31
SYNCRIP-204ENST00000616122 TTC21BQ7Z4L5 1316 aa6.89□□□□□ -1.31
SYNCRIP-204ENST00000616122 UPF3BQ9BZI7 483 aaKnown RBP6.89□□□□□ -1.31
SYNCRIP-204ENST00000616122 DIAPH3Q9NSV4 1193 aa6.89□□□□□ -1.31
SYNCRIP-204ENST00000616122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.89□□□□□ -1.313e-10■■■■□ 20.3
SYNCRIP-204ENST00000616122 C1orf141Q5JVX7 400 aa6.89□□□□□ -1.31
SYNCRIP-204ENST00000616122 ZNF530Q6P9A1 599 aaPredicted RBP6.89□□□□□ -1.31
SYNCRIP-204ENST00000616122 NEXNQ0ZGT2 675 aa6.89□□□□□ -1.31
SYNCRIP-204ENST00000616122 MEIS3Q99687 375 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms