RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 CHMP4BP1P59074 171 aa22.43■■□□□ 1.18
GABPB1-212ENST00000615671 TOP2AP11388 1531 aaKnown RBP22.43■■□□□ 1.18
GABPB1-212ENST00000615671 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
GABPB1-212ENST00000615671 MNS1Q8NEH6 495 aa22.42■■□□□ 1.18
GABPB1-212ENST00000615671 FAM13BQ9NYF5 915 aa22.42■■□□□ 1.18
GABPB1-212ENST00000615671 CLASRPQ8N2M8 674 aaKnown RBP22.42■■□□□ 1.18
GABPB1-212ENST00000615671 ZBED9Q6R2W3 1325 aa22.42■■□□□ 1.18
GABPB1-212ENST00000615671 SMC2O95347 1197 aa22.42■■□□□ 1.18
GABPB1-212ENST00000615671 CCDC158Q5M9N0 1113 aa22.42■■□□□ 1.18
GABPB1-212ENST00000615671 PSMA5P28066 241 aa22.41■■□□□ 1.18
GABPB1-212ENST00000615671 NUP133Q8WUM0 1156 aa22.41■■□□□ 1.18
GABPB1-212ENST00000615671 ARHGAP5Q13017 1502 aa22.41■■□□□ 1.18
GABPB1-212ENST00000615671 AK7Q96M32 723 aa22.41■■□□□ 1.18
GABPB1-212ENST00000615671 CDC45O75419 566 aa22.4■■□□□ 1.18
GABPB1-212ENST00000615671 CFAP70Q5T0N1 1121 aa22.4■■□□□ 1.18
GABPB1-212ENST00000615671 AFAP1Q8N556 730 aa22.4■■□□□ 1.18
GABPB1-212ENST00000615671 CHMP5Q9NZZ3 219 aa22.39■■□□□ 1.18
GABPB1-212ENST00000615671 SYCP1Q15431 976 aa22.39■■□□□ 1.17
GABPB1-212ENST00000615671 GNL3LQ9NVN8 582 aaKnown RBP22.38■■□□□ 1.17
GABPB1-212ENST00000615671 GAS2L2Q8NHY3 880 aa22.38■■□□□ 1.17
GABPB1-212ENST00000615671 TSR2Q969E8 191 aaKnown RBP22.38■■□□□ 1.17
GABPB1-212ENST00000615671 FKBP4Q02790 459 aaKnown RBP eCLIP22.37■■□□□ 1.17
GABPB1-212ENST00000615671 MAGEC2Q9UBF1 373 aaPredicted RBP22.37■■□□□ 1.17
GABPB1-212ENST00000615671 MATR3P43243 847 aaKnown RBP eCLIP22.37■■□□□ 1.17
GABPB1-212ENST00000615671 ADAMTS8Q9UP79 889 aa22.37■■□□□ 1.17
GABPB1-212ENST00000615671 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
GABPB1-212ENST00000615671 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.36■■□□□ 1.17
GABPB1-212ENST00000615671 MPHOSPH10O00566 681 aaKnown RBP22.36■■□□□ 1.17
GABPB1-212ENST00000615671 SLC4A2P04920 1241 aa22.36■■□□□ 1.17
GABPB1-212ENST00000615671 EXOSC9Q06265 439 aaKnown RBP22.36■■□□□ 1.17
GABPB1-212ENST00000615671 SULT6B1Q6IMI4 303 aa22.35■■□□□ 1.17
GABPB1-212ENST00000615671 MPHOSPH8Q99549 860 aa22.35■■□□□ 1.17
GABPB1-212ENST00000615671 NOB1Q9ULX3 412 aaKnown RBP22.35■■□□□ 1.17
GABPB1-212ENST00000615671 PDCL3Q9H2J4 239 aa22.35■■□□□ 1.17
GABPB1-212ENST00000615671 CCDC173Q0VFZ6 552 aa22.34■■□□□ 1.17
GABPB1-212ENST00000615671 NAT10Q9H0A0 1025 aaKnown RBP22.34■■□□□ 1.17
GABPB1-212ENST00000615671 TWISTNBQ3B726 338 aaPredicted RBP22.34■■□□□ 1.17
GABPB1-212ENST00000615671 CDK19Q9BWU1 502 aa22.34■■□□□ 1.17
GABPB1-212ENST00000615671 TEX35Q5T0J7 233 aa22.34■■□□□ 1.17
GABPB1-212ENST00000615671 NUCB2P80303 420 aa22.34■■□□□ 1.17
GABPB1-212ENST00000615671 MYCNP04198 464 aaPredicted RBP22.33■■□□□ 1.17
GABPB1-212ENST00000615671 HDGFL1Q5TGJ6 251 aa22.33■■□□□ 1.17
GABPB1-212ENST00000615671 TANGO6Q9C0B7 1094 aa22.33■■□□□ 1.17
GABPB1-212ENST00000615671 CCDC69A6NI79 296 aa22.33■■□□□ 1.16
GABPB1-212ENST00000615671 ZNF530Q6P9A1 599 aaPredicted RBP22.33■■□□□ 1.16
GABPB1-212ENST00000615671 SLC26A8Q96RN1 970 aa22.33■■□□□ 1.16
GABPB1-212ENST00000615671 VSIG10Q8N0Z9 540 aa22.32■■□□□ 1.16
GABPB1-212ENST00000615671 TCP11L2Q8N4U5 519 aa22.32■■□□□ 1.16
GABPB1-212ENST00000615671 TXLNAP40222 546 aa22.32■■□□□ 1.16
GABPB1-212ENST00000615671 KIF7Q2M1P5 1343 aa22.32■■□□□ 1.16
GABPB1-212ENST00000615671 NEK4P51957 841 aa22.32■■□□□ 1.16
GABPB1-212ENST00000615671 PAXIP1Q6ZW49 1069 aaPredicted RBP22.32■■□□□ 1.16
GABPB1-212ENST00000615671 CDCA7LQ96GN5 454 aa22.31■■□□□ 1.16
GABPB1-212ENST00000615671 ZNF219Q9P2Y4 722 aaPredicted RBP22.31■■□□□ 1.16
GABPB1-212ENST00000615671 DHX37Q8IY37 1157 aaKnown RBP22.31■■□□□ 1.16
GABPB1-212ENST00000615671 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.31■■□□□ 1.16
GABPB1-212ENST00000615671 AQRO60306 1485 aaKnown RBP eCLIP22.31■■□□□ 1.16
GABPB1-212ENST00000615671 GAPVD1Q14C86 1478 aa22.31■■□□□ 1.16
GABPB1-212ENST00000615671 CNTLNQ9NXG0 1405 aa22.31■■□□□ 1.16
GABPB1-212ENST00000615671 RRS1Q15050 365 aaKnown RBP22.31■■□□□ 1.16
GABPB1-212ENST00000615671 SEPT11Q9NVA2 429 aaKnown RBP22.3■■□□□ 1.16
GABPB1-212ENST00000615671 GNAI3P08754 354 aa22.3■■□□□ 1.16
GABPB1-212ENST00000615671 SSBP05455 408 aaKnown RBP eCLIP22.3■■□□□ 1.16
GABPB1-212ENST00000615671 ZC3H6P61129 1189 aaKnown RBP22.3■■□□□ 1.16
GABPB1-212ENST00000615671 CABP1Q9NZU7 370 aa22.3■■□□□ 1.16
GABPB1-212ENST00000615671 TRIM5Q9C035 493 aa22.3■■□□□ 1.16
GABPB1-212ENST00000615671 FIBPO43427 364 aa22.3■■□□□ 1.16
GABPB1-212ENST00000615671 USP5P45974 858 aa22.3■■□□□ 1.16
GABPB1-212ENST00000615671 GNAI2P04899 355 aa22.29■■□□□ 1.16
GABPB1-212ENST00000615671 CDR1P51861 262 aa22.29■■□□□ 1.16
GABPB1-212ENST00000615671 CCDC57Q2TAC2 916 aa22.29■■□□□ 1.16
GABPB1-212ENST00000615671 SPC24Q8NBT2 197 aa22.29■■□□□ 1.16
GABPB1-212ENST00000615671 STK38Q15208 465 aa22.29■■□□□ 1.16
GABPB1-212ENST00000615671 RAI14Q9P0K7 980 aa22.29■■□□□ 1.16
GABPB1-212ENST00000615671 SPG7Q9UQ90 795 aa22.29■■□□□ 1.16
GABPB1-212ENST00000615671 ANKRD62A6NC57 917 aa22.28■■□□□ 1.16
GABPB1-212ENST00000615671 CAVIN1Q6NZI2 390 aaKnown RBP22.28■■□□□ 1.16
GABPB1-212ENST00000615671 PRDM11Q9NQV5 511 aa22.28■■□□□ 1.16
GABPB1-212ENST00000615671 KINO60870 393 aaKnown RBP22.28■■□□□ 1.16
GABPB1-212ENST00000615671 MYOM3Q5VTT5 1437 aa22.27■■□□□ 1.16
GABPB1-212ENST00000615671 NEFHP12036 1026 aa22.27■■□□□ 1.15
GABPB1-212ENST00000615671 MPNDQ8N594 471 aa22.26■■□□□ 1.15
GABPB1-212ENST00000615671 SOGA3Q5TF21 947 aa22.26■■□□□ 1.15
GABPB1-212ENST00000615671 BTBD11A6QL63 1104 aa22.26■■□□□ 1.15
GABPB1-212ENST00000615671 PRPF40AO75400 957 aaKnown RBP22.26■■□□□ 1.15
GABPB1-212ENST00000615671 ZNF76P36508 570 aa22.25■■□□□ 1.15
GABPB1-212ENST00000615671 FILIP1LQ4L180 1135 aa22.25■■□□□ 1.15
GABPB1-212ENST00000615671 TDO2P48775 406 aa22.24■■□□□ 1.15
GABPB1-212ENST00000615671 RDXP35241 583 aaKnown RBP22.24■■□□□ 1.15
GABPB1-212ENST00000615671 AACSQ86V21 672 aa22.24■■□□□ 1.15
GABPB1-212ENST00000615671 SLC12A5Q9H2X9 1139 aa22.24■■□□□ 1.15
GABPB1-212ENST00000615671 ARGLU1Q9NWB6 273 aaPredicted RBP22.24■■□□□ 1.15
GABPB1-212ENST00000615671 BCAR3O75815 825 aa22.24■■□□□ 1.15
GABPB1-212ENST00000615671 HSP90B2PQ58FF3 399 aa22.24■■□□□ 1.15
GABPB1-212ENST00000615671 ERC1Q8IUD2 1116 aa22.24■■□□□ 1.15
GABPB1-212ENST00000615671 NACAP1Q9BZK3 213 aa22.24■■□□□ 1.15
GABPB1-212ENST00000615671 ADAMTS2O95450 1211 aa22.23■■□□□ 1.15
GABPB1-212ENST00000615671 MIS18AQ9NYP9 233 aa22.23■■□□□ 1.15
GABPB1-212ENST00000615671 MAP7D2Q96T17 732 aa22.23■■□□□ 1.15
GABPB1-212ENST00000615671 SMARCE1Q969G3 411 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms