RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.47□□□□□ -1.533e-10■■■■■ 27.7
CHD9-221ENST00000615216 RAPGEF4Q8WZA2 1011 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 TBC1D2BQ9UPU7 963 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 KIF6Q6ZMV9 814 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 WDR97A6NE52 1622 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 TXLNAP40222 546 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 SLC4A3P48751 1232 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 AEBP1Q8IUX7 1158 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 KINO60870 393 aaKnown RBP5.47□□□□□ -1.53
CHD9-221ENST00000615216 PDIA4P13667 645 aaKnown RBP5.47□□□□□ -1.53
CHD9-221ENST00000615216 AQRO60306 1485 aaKnown RBP eCLIP5.47□□□□□ -1.535e-7■■□□□ 14.2
CHD9-221ENST00000615216 EPRSP07814 1512 aaKnown RBP5.47□□□□□ -1.53
CHD9-221ENST00000615216 ATF3P18847 181 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 RRP12Q5JTH9 1297 aaKnown RBP5.47□□□□□ -1.53
CHD9-221ENST00000615216 BIVM-ERCC5R4GMW8 1640 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 MAP3K1Q13233 1512 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 NAP1L1P55209 391 aaKnown RBP5.47□□□□□ -1.53
CHD9-221ENST00000615216 CT47A1Q5JQC4 288 aaPredicted RBP5.47□□□□□ -1.53
CHD9-221ENST00000615216 CAGE1Q8TC20 777 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 TOPBP1Q92547 1522 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 CCT4P50991 539 aaKnown RBP5.47□□□□□ -1.53
CHD9-221ENST00000615216 OSCARQ8IYS5 282 aa5.47□□□□□ -1.53
CHD9-221ENST00000615216 HMGN5P82970 282 aaKnown RBP5.46□□□□□ -1.53
CHD9-221ENST00000615216 LNPKQ9C0E8 428 aa5.46□□□□□ -1.53
CHD9-221ENST00000615216 NESP48681 1621 aa5.46□□□□□ -1.53
CHD9-221ENST00000615216 LAMC3Q9Y6N6 1575 aa5.46□□□□□ -1.53
CHD9-221ENST00000615216 ODF2Q5BJF6 829 aa5.46□□□□□ -1.53
CHD9-221ENST00000615216 JMYQ8N9B5 988 aa5.46□□□□□ -1.53
CHD9-221ENST00000615216 TROQ12816 1431 aaPredicted RBP5.46□□□□□ -1.53
CHD9-221ENST00000615216 SRCIN1Q9C0H9 1055 aa5.46□□□□□ -1.53
CHD9-221ENST00000615216 PANK1Q8TE04 598 aa5.46□□□□□ -1.54
CHD9-221ENST00000615216 MAGEC2Q9UBF1 373 aaPredicted RBP5.46□□□□□ -1.54
CHD9-221ENST00000615216 MEX3CQ5U5Q3 659 aaKnown RBP5.46□□□□□ -1.54
CHD9-221ENST00000615216 FSD1Q9BTV5 496 aa5.46□□□□□ -1.54
CHD9-221ENST00000615216 EIF2AK4Q9P2K8 1649 aaKnown RBP5.46□□□□□ -1.54
CHD9-221ENST00000615216 GNAI2P04899 355 aa5.46□□□□□ -1.54
CHD9-221ENST00000615216 FILIP1LQ4L180 1135 aa5.46□□□□□ -1.54
CHD9-221ENST00000615216 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.46□□□□□ -1.549e-7■■■■□ 21.2
CHD9-221ENST00000615216 DACH1Q9UI36 760 aa5.46□□□□□ -1.54
CHD9-221ENST00000615216 NFKBIBQ15653 356 aa5.46□□□□□ -1.54
CHD9-221ENST00000615216 WDR63Q8IWG1 891 aa5.46□□□□□ -1.54
CHD9-221ENST00000615216 CLASRPQ8N2M8 674 aaKnown RBP5.46□□□□□ -1.54
CHD9-221ENST00000615216 PNISRQ8TF01 805 aaKnown RBP5.46□□□□□ -1.54
CHD9-221ENST00000615216 FAM13BQ9NYF5 915 aa5.46□□□□□ -1.54
CHD9-221ENST00000615216 THOC2Q8NI27 1593 aaKnown RBP5.45□□□□□ -1.54
CHD9-221ENST00000615216 PPP2R1AP30153 589 aa5.45□□□□□ -1.54
CHD9-221ENST00000615216 PLEKHO1Q53GL0 409 aaPredicted RBP5.45□□□□□ -1.54
CHD9-221ENST00000615216 NECTIN2Q92692 538 aa5.45□□□□□ -1.54
CHD9-221ENST00000615216 GNL3LQ9NVN8 582 aaKnown RBP5.45□□□□□ -1.54
CHD9-221ENST00000615216 RAD21O60216 631 aa5.45□□□□□ -1.54
CHD9-221ENST00000615216 WASHC4Q2M389 1173 aa5.45□□□□□ -1.54
CHD9-221ENST00000615216 LUC7LQ9NQ29 371 aaKnown RBP5.45□□□□□ -1.54
CHD9-221ENST00000615216 CCDC66A2RUB6 948 aa5.45□□□□□ -1.54
CHD9-221ENST00000615216 HMOX1P09601 288 aa5.45□□□□□ -1.54
CHD9-221ENST00000615216 CAVIN1Q6NZI2 390 aaKnown RBP5.45□□□□□ -1.54
CHD9-221ENST00000615216 FBXW7Q969H0 707 aa5.45□□□□□ -1.54
CHD9-221ENST00000615216 PRG4Q92954 1404 aaPredicted RBP5.45□□□□□ -1.54
CHD9-221ENST00000615216 CAMSAP2Q08AD1 1489 aa5.45□□□□□ -1.54
CHD9-221ENST00000615216 RPGRIP1LQ68CZ1 1315 aa5.45□□□□□ -1.54
CHD9-221ENST00000615216 SDF4Q9BRK5 362 aa5.45□□□□□ -1.54
CHD9-221ENST00000615216 ANKRD30BQ9BXX2 1392 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 PDILTQ8N807 584 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 CDK5RAP3Q96JB5 506 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 CABP2Q9NPB3 220 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 KAT6BQ8WYB5 2073 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 ATAD2Q6PL18 1390 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 TRAK2O60296 914 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 STIM1Q13586 685 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 HSP90AB2PQ58FF8 381 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 IQCEQ6IPM2 695 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 NEUROD6Q96NK8 337 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 OFD1O75665 1012 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 ERLIN2O94905 339 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 TRIM5Q9C035 493 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 WDR33Q9C0J8 1336 aaKnown RBP5.44□□□□□ -1.54
CHD9-221ENST00000615216 CBFA2T2O43439 604 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 SMC2O95347 1197 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 CCDC192P0DO97 292 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 PRXQ9BXM0 1461 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 CFAP43Q8NDM7 1665 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 CDKL5O76039 1030 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 ZNF428Q96B54 188 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 SYTL4Q96C24 671 aaPredicted RBP5.44□□□□□ -1.54
CHD9-221ENST00000615216 ADAMTS8Q9UP79 889 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 PLEKHH1Q9ULM0 1364 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 TTC39AQ5SRH9 613 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 CCDC191Q8NCU4 936 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 SNAPC4Q5SXM2 1469 aa5.44□□□□□ -1.54
CHD9-221ENST00000615216 CCDC27Q2M243 656 aa5.43□□□□□ -1.54
CHD9-221ENST00000615216 CIZ1Q9ULV3 898 aaPredicted RBP5.43□□□□□ -1.54
CHD9-221ENST00000615216 MSH5O43196 834 aa5.43□□□□□ -1.54
CHD9-221ENST00000615216 FOSBP53539 338 aa5.43□□□□□ -1.54
CHD9-221ENST00000615216 ZSCAN25Q6NSZ9 544 aa5.43□□□□□ -1.54
CHD9-221ENST00000615216 ZNHIT6Q9NWK9 470 aaKnown RBP5.43□□□□□ -1.54
CHD9-221ENST00000615216 R3HCC1Q9Y3T6 440 aaKnown RBP5.43□□□□□ -1.54
CHD9-221ENST00000615216 CYP46A1Q9Y6A2 500 aa5.43□□□□□ -1.54
CHD9-221ENST00000615216 MTHFSP49914 203 aa5.43□□□□□ -1.54
CHD9-221ENST00000615216 CALRP27797 417 aaKnown RBP5.43□□□□□ -1.54
CHD9-221ENST00000615216 VSIG10Q8N0Z9 540 aa5.43□□□□□ -1.54
CHD9-221ENST00000615216 LRRCC1Q9C099 1032 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms