RNA–Protein interactions for RNA: ENST00000614000.4

SYNRG-220, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 4,234 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-220ENST00000614000 NCKAP5LQ9HCH0 1330 aa7.26□□□□□ -1.25
SYNRG-220ENST00000614000 RGS3P49796 1198 aa7.26□□□□□ -1.25
SYNRG-220ENST00000614000 TXNDC2Q86VQ3 553 aa7.25□□□□□ -1.25
SYNRG-220ENST00000614000 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.25□□□□□ -1.25
SYNRG-220ENST00000614000 PNNQ9H307 717 aaKnown RBP7.25□□□□□ -1.25
SYNRG-220ENST00000614000 L3MBTL2Q969R5 705 aa7.25□□□□□ -1.25
SYNRG-220ENST00000614000 BECN1Q14457 450 aa7.25□□□□□ -1.25
SYNRG-220ENST00000614000 CPSF1Q10570 1443 aaKnown RBP7.24□□□□□ -1.25
SYNRG-220ENST00000614000 C1orf167Q5SNV9 1468 aa7.24□□□□□ -1.25
SYNRG-220ENST00000614000 RGPD1P0DJD0 1748 aa7.23□□□□□ -1.25
SYNRG-220ENST00000614000 NBPF8Q3BBV2 869 aa7.23□□□□□ -1.25
SYNRG-220ENST00000614000 COL14A1Q05707 1796 aaKnown RBP7.22□□□□□ -1.25
SYNRG-220ENST00000614000 GZF1Q9H116 711 aaPredicted RBP7.22□□□□□ -1.25
SYNRG-220ENST00000614000 PLCB2Q00722 1185 aa7.22□□□□□ -1.25
SYNRG-220ENST00000614000 SPRYD3Q8NCJ5 442 aa7.22□□□□□ -1.25
SYNRG-220ENST00000614000 HSP90AA2PQ14568 343 aaPredicted RBP7.22□□□□□ -1.25
SYNRG-220ENST00000614000 SMG6Q86US8 1419 aaKnown RBP7.21□□□□□ -1.25
SYNRG-220ENST00000614000 LTN1O94822 1766 aa7.21□□□□□ -1.25
SYNRG-220ENST00000614000 NFAT5O94916 1531 aa7.21□□□□□ -1.25
SYNRG-220ENST00000614000 PLEKHG2Q9H7P9 1386 aa7.21□□□□□ -1.26
SYNRG-220ENST00000614000 SBNO1A3KN83 1393 aa7.21□□□□□ -1.26
SYNRG-220ENST00000614000 TAOK2Q9UL54 1235 aa7.21□□□□□ -1.26
SYNRG-220ENST00000614000 TMEM94Q12767 1356 aa7.2□□□□□ -1.26
SYNRG-220ENST00000614000 TESK2Q96S53 571 aa7.2□□□□□ -1.26
SYNRG-220ENST00000614000 ROCK2O75116 1388 aaKnown RBP7.2□□□□□ -1.26
SYNRG-220ENST00000614000 NPC1L1Q9UHC9 1359 aa7.2□□□□□ -1.26
SYNRG-220ENST00000614000 SIN3AQ96ST3 1273 aa7.19□□□□□ -1.26
SYNRG-220ENST00000614000 PLEKHH1Q9ULM0 1364 aa7.19□□□□□ -1.26
SYNRG-220ENST00000614000 PKNOX2Q96KN3 472 aa7.19□□□□□ -1.26
SYNRG-220ENST00000614000 CICQ96RK0 1608 aaPredicted RBP7.19□□□□□ -1.26
SYNRG-220ENST00000614000 USP31Q70CQ4 1352 aa7.19□□□□□ -1.26
SYNRG-220ENST00000614000 USP47Q96K76 1375 aa7.19□□□□□ -1.26
SYNRG-220ENST00000614000 GOLGA6L22H0YM25 854 aa7.19□□□□□ -1.26
SYNRG-220ENST00000614000 PPP4R3CPQ6ZMV5 832 aa7.19□□□□□ -1.26
SYNRG-220ENST00000614000 RGPD3A6NKT7 1758 aaPredicted RBP7.18□□□□□ -1.26
SYNRG-220ENST00000614000 RGPD4Q7Z3J3 1758 aa7.18□□□□□ -1.26
SYNRG-220ENST00000614000 ATAD2Q6PL18 1390 aa7.18□□□□□ -1.26
SYNRG-220ENST00000614000 ADAMTS7Q9UKP4 1686 aa7.18□□□□□ -1.26
SYNRG-220ENST00000614000 PARP4Q9UKK3 1724 aaKnown RBP7.18□□□□□ -1.26
SYNRG-220ENST00000614000 HSPA2P54652 639 aa7.18□□□□□ -1.26
SYNRG-220ENST00000614000 ZNF335Q9H4Z2 1342 aaPredicted RBP7.18□□□□□ -1.26
SYNRG-220ENST00000614000 DCAF11Q8TEB1 546 aa7.18□□□□□ -1.26
SYNRG-220ENST00000614000 SLKQ9H2G2 1235 aaPredicted RBP7.18□□□□□ -1.26
SYNRG-220ENST00000614000 MSH6P52701 1360 aa7.17□□□□□ -1.26
SYNRG-220ENST00000614000 NCAPD2Q15021 1401 aa7.17□□□□□ -1.26
SYNRG-220ENST00000614000 SHANK3Q9BYB0 1731 aa7.17□□□□□ -1.26
SYNRG-220ENST00000614000 AMOTL2Q9Y2J4 779 aa7.17□□□□□ -1.26
SYNRG-220ENST00000614000 THSD7AQ9UPZ6 1657 aa7.17□□□□□ -1.26
SYNRG-220ENST00000614000 PKD1L3Q7Z443 1732 aa7.17□□□□□ -1.26
SYNRG-220ENST00000614000 CFAP70Q5T0N1 1121 aa7.17□□□□□ -1.26
SYNRG-220ENST00000614000 IL27Q8NEV9 243 aa7.17□□□□□ -1.26
SYNRG-220ENST00000614000 PLEKHG3A1L390 1219 aa7.16□□□□□ -1.26
SYNRG-220ENST00000614000 MSNP26038 577 aaKnown RBP7.16□□□□□ -1.26
SYNRG-220ENST00000614000 CERKQ8TCT0 537 aa7.16□□□□□ -1.26
SYNRG-220ENST00000614000 PEAK1Q9H792 1746 aa7.16□□□□□ -1.26
SYNRG-220ENST00000614000 WDR43Q15061 677 aaKnown RBP eCLIP7.16□□□□□ -1.26
SYNRG-220ENST00000614000 OVOS2A0A0J9YW53 1432 aa7.16□□□□□ -1.26
SYNRG-220ENST00000614000 OVOS2Q6IE36 1432 aa7.16□□□□□ -1.26
SYNRG-220ENST00000614000 CENPJQ9HC77 1338 aaPredicted RBP7.16□□□□□ -1.26
SYNRG-220ENST00000614000 PODXL2Q9NZ53 605 aa7.16□□□□□ -1.26
SYNRG-220ENST00000614000 EDC4Q6P2E9 1401 aaKnown RBP7.15□□□□□ -1.26
SYNRG-220ENST00000614000 C19orf44Q9H6X5 657 aa7.15□□□□□ -1.26
SYNRG-220ENST00000614000 STAG3Q9UJ98 1225 aa7.15□□□□□ -1.26
SYNRG-220ENST00000614000 USP6P35125 1406 aa7.15□□□□□ -1.26
SYNRG-220ENST00000614000 L1TD1Q5T7N2 865 aaKnown RBP7.15□□□□□ -1.26
SYNRG-220ENST00000614000 IPO9Q96P70 1041 aaKnown RBP7.15□□□□□ -1.26
SYNRG-220ENST00000614000 NSD2O96028 1365 aa7.15□□□□□ -1.27
SYNRG-220ENST00000614000 SOS2Q07890 1332 aaPredicted RBP7.15□□□□□ -1.27
SYNRG-220ENST00000614000 ZNF831Q5JPB2 1677 aa7.15□□□□□ -1.27
SYNRG-220ENST00000614000 TNS3Q68CZ2 1445 aa7.14□□□□□ -1.27
SYNRG-220ENST00000614000 ANKRD36BQ8N2N9 1353 aa7.14□□□□□ -1.27
SYNRG-220ENST00000614000 VIRMAQ69YN4 1812 aaKnown RBP7.14□□□□□ -1.27
SYNRG-220ENST00000614000 SLC4A3P48751 1232 aa7.14□□□□□ -1.27
SYNRG-220ENST00000614000 RSPH6AQ9H0K4 717 aa7.13□□□□□ -1.27
SYNRG-220ENST00000614000 KIF24Q5T7B8 1368 aa7.13□□□□□ -1.27
SYNRG-220ENST00000614000 DISP3Q9P2K9 1392 aa7.13□□□□□ -1.27
SYNRG-220ENST00000614000 USP19O94966 1318 aa7.13□□□□□ -1.27
SYNRG-220ENST00000614000 NBPF1Q3BBV0 1214 aa7.13□□□□□ -1.27
SYNRG-220ENST00000614000 KDM2AQ9Y2K7 1162 aa7.13□□□□□ -1.27
SYNRG-220ENST00000614000 EIF4G2P78344 907 aaKnown RBP eCLIP7.13□□□□□ -1.27
SYNRG-220ENST00000614000 RGPD5Q99666 1765 aa7.13□□□□□ -1.27
SYNRG-220ENST00000614000 WASLO00401 505 aaPredicted RBP7.12□□□□□ -1.27
SYNRG-220ENST00000614000 PRR36Q9H6K5 1346 aa7.12□□□□□ -1.27
SYNRG-220ENST00000614000 LRP6O75581 1613 aa7.12□□□□□ -1.27
SYNRG-220ENST00000614000 CADPS2Q86UW7 1296 aa7.12□□□□□ -1.27
SYNRG-220ENST00000614000 PPIP5K1Q6PFW1 1433 aa7.12□□□□□ -1.27
SYNRG-220ENST00000614000 CDK12Q9NYV4 1490 aaPredicted RBP7.12□□□□□ -1.27
SYNRG-220ENST00000614000 INSRP06213 1382 aa7.12□□□□□ -1.27
SYNRG-220ENST00000614000 CPDO75976 1380 aa7.11□□□□□ -1.27
SYNRG-220ENST00000614000 MAP2P11137 1827 aaKnown RBP7.11□□□□□ -1.27
SYNRG-220ENST00000614000 TNNT3P45378 269 aaPredicted RBP7.11□□□□□ -1.27
SYNRG-220ENST00000614000 EVC2Q86UK5 1308 aa7.11□□□□□ -1.27
SYNRG-220ENST00000614000 COL3A1P02461 1466 aaPredicted RBP7.11□□□□□ -1.27
SYNRG-220ENST00000614000 KTN1Q86UP2 1357 aaKnown RBP7.1□□□□□ -1.27
SYNRG-220ENST00000614000 PAPPAQ13219 1627 aa7.1□□□□□ -1.27
SYNRG-220ENST00000614000 SIPA1L3O60292 1781 aaPredicted RBP7.1□□□□□ -1.27
SYNRG-220ENST00000614000 FBXO41Q8TF61 875 aa7.1□□□□□ -1.27
SYNRG-220ENST00000614000 SLC26A8Q96RN1 970 aa7.1□□□□□ -1.27
SYNRG-220ENST00000614000 LRRC37A3O60309 1634 aa7.1□□□□□ -1.27
SYNRG-220ENST00000614000 TTC21AQ8NDW8 1320 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms