RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 ABCC5O15440 1437 aa15.14■□□□□ 0.01
TNFAIP3-206ENST00000612899 FSD1Q9BTV5 496 aa15.14■□□□□ 0.01
TNFAIP3-206ENST00000612899 GNAI2P04899 355 aa15.13■□□□□ 0.01
TNFAIP3-206ENST00000612899 NFXL1Q6ZNB6 911 aa15.13■□□□□ 0.01
TNFAIP3-206ENST00000612899 MAP7D2Q96T17 732 aa15.13■□□□□ 0.01
TNFAIP3-206ENST00000612899 BACH2Q9BYV9 841 aa15.13■□□□□ 0.01
TNFAIP3-206ENST00000612899 SMG6Q86US8 1419 aaKnown RBP15.13■□□□□ 0.01
TNFAIP3-206ENST00000612899 WWC1Q8IX03 1113 aa15.13■□□□□ 0.01
TNFAIP3-206ENST00000612899 GCC1Q96CN9 775 aa15.13■□□□□ 0.01
TNFAIP3-206ENST00000612899 MAGI1Q96QZ7 1491 aaPredicted RBP15.13■□□□□ 0.01
TNFAIP3-206ENST00000612899 NOL10Q9BSC4 688 aaKnown RBP15.13■□□□□ 0.01
TNFAIP3-206ENST00000612899 RALYLQ86SE5 291 aaKnown RBP15.12■□□□□ 0.01
TNFAIP3-206ENST00000612899 CNTROBQ8N137 903 aa15.12■□□□□ 0.01
TNFAIP3-206ENST00000612899 CCDC61Q9Y6R9 512 aa15.12■□□□□ 0.01
TNFAIP3-206ENST00000612899 IQGAP2Q13576 1575 aa15.12■□□□□ 0.01
TNFAIP3-206ENST00000612899 TPM3P06753 285 aa15.12■□□□□ 0.01
TNFAIP3-206ENST00000612899 MVPQ14764 893 aaKnown RBP15.12■□□□□ 0.01
TNFAIP3-206ENST00000612899 ZNF530Q6P9A1 599 aaPredicted RBP15.12■□□□□ 0.01
TNFAIP3-206ENST00000612899 FAM177BA6PVY3 158 aa15.12■□□□□ 0.01
TNFAIP3-206ENST00000612899 ATAD2Q6PL18 1390 aa15.12■□□□□ 0.01
TNFAIP3-206ENST00000612899 NSD3Q9BZ95 1437 aa15.12■□□□□ 0.01
TNFAIP3-206ENST00000612899 WAPLQ7Z5K2 1190 aa15.11■□□□□ 0.01
TNFAIP3-206ENST00000612899 CCDC141Q6ZP82 1450 aa15.11■□□□□ 0.01
TNFAIP3-206ENST00000612899 STRN4Q9NRL3 753 aa15.11■□□□□ 0.01
TNFAIP3-206ENST00000612899 NOC3LQ8WTT2 800 aaKnown RBP15.11■□□□□ 0.01
TNFAIP3-206ENST00000612899 THUMPD2Q9BTF0 503 aaKnown RBP15.11■□□□□ 0.01
TNFAIP3-206ENST00000612899 TMPOP42166 694 aaKnown RBP15.11■□□□□ 0.01
TNFAIP3-206ENST00000612899 SLFN5Q08AF3 891 aa15.11■□□□□ 0.01
TNFAIP3-206ENST00000612899 AMOTL1Q8IY63 956 aa15.11■□□□□ 0.01
TNFAIP3-206ENST00000612899 FCHSD2O94868 740 aa15.1■□□□□ 0.01
TNFAIP3-206ENST00000612899 CT47B1P0C2W7 299 aaPredicted RBP15.1■□□□□ 0.01
TNFAIP3-206ENST00000612899 FAM43AQ8N2R8 423 aa15.1■□□□□ 0.01
TNFAIP3-206ENST00000612899 BICRAQ9NZM4 1560 aa15.1■□□□□ 0.01
TNFAIP3-206ENST00000612899 DHX16O60231 1041 aaKnown RBP15.1■□□□□ 0.01
TNFAIP3-206ENST00000612899 NUDT16Q96DE0 195 aaKnown RBP15.09■□□□□ 0.01
TNFAIP3-206ENST00000612899 TATP17735 454 aaPredicted RBP15.09■□□□□ 0.01
TNFAIP3-206ENST00000612899 FBXW7Q969H0 707 aa15.09■□□□□ 0.01
TNFAIP3-206ENST00000612899 DNAJC2Q99543 621 aaKnown RBP15.09■□□□□ 0.01
TNFAIP3-206ENST00000612899 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
TNFAIP3-206ENST00000612899 ZMYND15Q9H091 742 aa15.09■□□□□ 0.01
TNFAIP3-206ENST00000612899 CAMSAP2Q08AD1 1489 aa15.09■□□□□ 0.01
TNFAIP3-206ENST00000612899 NCOA1Q15788 1441 aa15.08■□□□□ 0
TNFAIP3-206ENST00000612899 ERICH2A1L162 156 aa15.08■□□□□ 0
TNFAIP3-206ENST00000612899 XPCQ01831 940 aaPredicted RBP15.08■□□□□ 0
TNFAIP3-206ENST00000612899 SRCIN1Q9C0H9 1055 aa15.08■□□□□ 0
TNFAIP3-206ENST00000612899 NINLQ9Y2I6 1382 aa15.08■□□□□ 0
TNFAIP3-206ENST00000612899 CCT4P50991 539 aaKnown RBP15.07■□□□□ 0
TNFAIP3-206ENST00000612899 RNF214Q8ND24 703 aa15.07■□□□□ 0
TNFAIP3-206ENST00000612899 ADGRF5Q8IZF2 1346 aa15.07■□□□□ 0
TNFAIP3-206ENST00000612899 TSR1Q2NL82 804 aaKnown RBP15.07■□□□□ 0
TNFAIP3-206ENST00000612899 CCAR2Q8N163 923 aaKnown RBP15.07■□□□□ 0
TNFAIP3-206ENST00000612899 TRAK2O60296 914 aa15.07■□□□□ 0
TNFAIP3-206ENST00000612899 CCDC73Q6ZRK6 1079 aa15.07■□□□□ 0
TNFAIP3-206ENST00000612899 FYB1O15117 783 aa15.06■□□□□ 0
TNFAIP3-206ENST00000612899 NFE2L2Q16236 605 aa15.06■□□□□ 0
TNFAIP3-206ENST00000612899 CCDC27Q2M243 656 aa15.06■□□□□ 0
TNFAIP3-206ENST00000612899 MTERF4Q7Z6M4 381 aaKnown RBP15.06■□□□□ 0
TNFAIP3-206ENST00000612899 ZNF592Q92610 1267 aa15.06■□□□□ 0
TNFAIP3-206ENST00000612899 SIL1Q9H173 461 aa15.06■□□□□ 0
TNFAIP3-206ENST00000612899 RABEP1Q15276 862 aa15.06■□□□□ 0
TNFAIP3-206ENST00000612899 ANKLE2Q86XL3 938 aa15.06■□□□□ 0
TNFAIP3-206ENST00000612899 DDX54Q8TDD1 881 aaKnown RBP15.06■□□□□ 0
TNFAIP3-206ENST00000612899 PSMA5P28066 241 aa15.05■□□□□ 0
TNFAIP3-206ENST00000612899 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.05■□□□□ 0
TNFAIP3-206ENST00000612899 SASS6Q6UVJ0 657 aa15.05■□□□□ 0
TNFAIP3-206ENST00000612899 TMEM57Q8N5G2 664 aa15.05■□□□□ 0
TNFAIP3-206ENST00000612899 C20orf194Q5TEA3 1177 aa15.05■□□□□ -0
TNFAIP3-206ENST00000612899 CHD1LQ86WJ1 897 aa15.05■□□□□ -0
TNFAIP3-206ENST00000612899 LRRCC1Q9C099 1032 aa15.05■□□□□ -0
TNFAIP3-206ENST00000612899 MIS18AQ9NYP9 233 aa15.05■□□□□ -0
TNFAIP3-206ENST00000612899 PTPN23Q9H3S7 1636 aa15.05■□□□□ -0
TNFAIP3-206ENST00000612899 DCTN1Q14203 1278 aa15.05■□□□□ -0
TNFAIP3-206ENST00000612899 RBM33Q96EV2 1170 aaKnown RBP15.05■□□□□ -0
TNFAIP3-206ENST00000612899 IDI1Q13907 227 aa15.04■□□□□ -0
TNFAIP3-206ENST00000612899 SAFBQ15424 915 aaKnown RBP eCLIP15.04■□□□□ -0
TNFAIP3-206ENST00000612899 MEX3CQ5U5Q3 659 aaKnown RBP15.04■□□□□ -0
TNFAIP3-206ENST00000612899 SKAP1Q86WV1 359 aa15.04■□□□□ -0
TNFAIP3-206ENST00000612899 TPM1P09493 284 aa15.04■□□□□ -0
TNFAIP3-206ENST00000612899 MYL6BP14649 208 aa15.04■□□□□ -0
TNFAIP3-206ENST00000612899 TOM1L2Q6ZVM7 507 aa15.04■□□□□ -0
TNFAIP3-206ENST00000612899 KDM4AO75164 1064 aa15.04■□□□□ -0
TNFAIP3-206ENST00000612899 ZC3H6P61129 1189 aaKnown RBP15.04■□□□□ -0
TNFAIP3-206ENST00000612899 CAVIN1Q6NZI2 390 aaKnown RBP15.04■□□□□ -0
TNFAIP3-206ENST00000612899 TRIM34Q9BYJ4 488 aa15.04■□□□□ -0
TNFAIP3-206ENST00000612899 FBXO31Q5XUX0 539 aaPredicted RBP15.03■□□□□ -0
TNFAIP3-206ENST00000612899 GRIN2AQ12879 1464 aa15.03■□□□□ -0
TNFAIP3-206ENST00000612899 CD109Q6YHK3 1445 aa15.03■□□□□ -0
TNFAIP3-206ENST00000612899 SRGAP3O43295 1099 aa15.03■□□□□ -0
TNFAIP3-206ENST00000612899 CABP4P57796 275 aa15.03■□□□□ -0
TNFAIP3-206ENST00000612899 IL1RAPL2Q9NP60 686 aa15.03■□□□□ -0
TNFAIP3-206ENST00000612899 MCM10Q7L590 875 aa15.02■□□□□ -0
TNFAIP3-206ENST00000612899 PRPF40AO75400 957 aaKnown RBP15.02■□□□□ -0
TNFAIP3-206ENST00000612899 MAP4K4O95819 1239 aaPredicted RBP15.02■□□□□ -0
TNFAIP3-206ENST00000612899 ERC1Q8IUD2 1116 aa15.02■□□□□ -0
TNFAIP3-206ENST00000612899 SDF4Q9BRK5 362 aa15.02■□□□□ -0
TNFAIP3-206ENST00000612899 SSH1Q8WYL5 1049 aa15.02□□□□□ -0.01
TNFAIP3-206ENST00000612899 PRDM11Q9NQV5 511 aa15.02□□□□□ -0.01
TNFAIP3-206ENST00000612899 NME9Q86XW9 330 aa15.02□□□□□ -0.01
TNFAIP3-206ENST00000612899 MCM2P49736 904 aa15.01□□□□□ -0.01
TNFAIP3-206ENST00000612899 MTMR7Q9Y216 660 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms