RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 ALS2Q96Q42 1657 aa21.32■■□□□ 1
FDPS-221ENST00000612683 KRT27Q7Z3Y8 459 aa21.32■■□□□ 1
FDPS-221ENST00000612683 SF3B2Q13435 895 aaKnown RBP21.31■■□□□ 1
FDPS-221ENST00000612683 FAM98CQ17RN3 349 aaKnown RBP21.31■■□□□ 1
FDPS-221ENST00000612683 NBPF8Q3BBV2 869 aa21.31■■□□□ 1
FDPS-221ENST00000612683 PRDM11Q9NQV5 511 aa21.31■■□□□ 1
FDPS-221ENST00000612683 BRWD3Q6RI45 1802 aa21.31■■□□□ 1
FDPS-221ENST00000612683 ACEP12821 1306 aa21.3■■□□□ 1
FDPS-221ENST00000612683 NUTM2GQ5VZR2 741 aa21.3■■□□□ 1
FDPS-221ENST00000612683 ATP7BP35670 1465 aa21.3■■□□□ 1
FDPS-221ENST00000612683 KIAA1210Q9ULL0 1709 aa21.29■■□□□ 1
FDPS-221ENST00000612683 BLMP54132 1417 aaPredicted RBP21.29■■□□□ 1
FDPS-221ENST00000612683 PLEKHG3A1L390 1219 aa21.28■■□□□ 1
FDPS-221ENST00000612683 SRPK2P78362 688 aaKnown RBP21.28■■□□□ 1
FDPS-221ENST00000612683 ITSN1Q15811 1721 aa21.28■■□□□ 1
FDPS-221ENST00000612683 ZC3H6P61129 1189 aaKnown RBP21.27■■□□□ 1
FDPS-221ENST00000612683 DEFB132Q7Z7B7 95 aa21.27■■□□□ 1
FDPS-221ENST00000612683 L3MBTL2Q969R5 705 aa21.27■■□□□ 1
FDPS-221ENST00000612683 CENPJQ9HC77 1338 aaPredicted RBP21.27■□□□□ 0.99
FDPS-221ENST00000612683 COL14A1Q05707 1796 aaKnown RBP21.26■□□□□ 0.99
FDPS-221ENST00000612683 CHRNA2Q15822 529 aa21.26■□□□□ 0.99
FDPS-221ENST00000612683 SIN3AQ96ST3 1273 aa21.26■□□□□ 0.99
FDPS-221ENST00000612683 EP400Q96L91 3159 aa21.26■□□□□ 0.99
FDPS-221ENST00000612683 ABTB2Q8N961 1025 aa21.25■□□□□ 0.99
FDPS-221ENST00000612683 SPATA31A5Q5VU36 1347 aa21.25■□□□□ 0.99
FDPS-221ENST00000612683 SPATA31A7Q8IWB4 1347 aa21.25■□□□□ 0.99
FDPS-221ENST00000612683 POLR3AO14802 1390 aaPredicted RBP21.24■□□□□ 0.99
FDPS-221ENST00000612683 NEUROD1Q13562 356 aa21.24■□□□□ 0.99
FDPS-221ENST00000612683 CABP2Q9NPB3 220 aa21.24■□□□□ 0.99
FDPS-221ENST00000612683 KIAA0232Q92628 1395 aa21.23■□□□□ 0.99
FDPS-221ENST00000612683 STRN4Q9NRL3 753 aa21.23■□□□□ 0.99
FDPS-221ENST00000612683 NRAPQ86VF7 1730 aa21.22■□□□□ 0.99
FDPS-221ENST00000612683 EVA1CP58658 441 aa21.21■□□□□ 0.99
FDPS-221ENST00000612683 CRYBG1Q9Y4K1 1723 aa21.2■□□□□ 0.98
FDPS-221ENST00000612683 FAM182BQ5T319 152 aa21.19■□□□□ 0.98
FDPS-221ENST00000612683 NLRP13Q86W25 1043 aa21.19■□□□□ 0.98
FDPS-221ENST00000612683 PPIP5K1Q6PFW1 1433 aa21.19■□□□□ 0.98
FDPS-221ENST00000612683 CABP1Q9NZU7 370 aa21.18■□□□□ 0.98
FDPS-221ENST00000612683 SPATA31A1Q5TZJ5 1347 aa21.18■□□□□ 0.98
FDPS-221ENST00000612683 BAG6P46379 1132 aa21.17■□□□□ 0.98
FDPS-221ENST00000612683 USP35Q9P2H5 1018 aa21.17■□□□□ 0.98
FDPS-221ENST00000612683 TOPAZ1Q8N9V7 1692 aa21.17■□□□□ 0.98
FDPS-221ENST00000612683 GCP02774 474 aa21.15■□□□□ 0.98
FDPS-221ENST00000612683 EVC2Q86UK5 1308 aa21.14■□□□□ 0.97
FDPS-221ENST00000612683 PHRF1Q9P1Y6 1649 aaKnown RBP21.14■□□□□ 0.97
FDPS-221ENST00000612683 NLRP6P59044 892 aa21.12■□□□□ 0.97
FDPS-221ENST00000612683 QRICH2Q9H0J4 1663 aa21.12■□□□□ 0.97
FDPS-221ENST00000612683 ROCK2O75116 1388 aaKnown RBP21.11■□□□□ 0.97
FDPS-221ENST00000612683 USP19O94966 1318 aa21.11■□□□□ 0.97
FDPS-221ENST00000612683 ZBTB7CA1YPR0 619 aa21.11■□□□□ 0.97
FDPS-221ENST00000612683 EN1Q05925 392 aaPredicted RBP21.11■□□□□ 0.97
FDPS-221ENST00000612683 LARP1Q6PKG0 1096 aaKnown RBP21.11■□□□□ 0.97
FDPS-221ENST00000612683 BRD4O60885 1362 aaPredicted RBP21.1■□□□□ 0.97
FDPS-221ENST00000612683 CPDO75976 1380 aa21.1■□□□□ 0.97
FDPS-221ENST00000612683 PDE3BQ13370 1112 aa21.09■□□□□ 0.97
FDPS-221ENST00000612683 FAM196AQ6ZSG2 479 aa21.09■□□□□ 0.97
FDPS-221ENST00000612683 BARGINQ6ZT62 677 aa21.09■□□□□ 0.97
FDPS-221ENST00000612683 SSH2Q76I76 1423 aa21.09■□□□□ 0.97
FDPS-221ENST00000612683 CAMTA1Q9Y6Y1 1673 aa21.09■□□□□ 0.97
FDPS-221ENST00000612683 TCP11L2Q8N4U5 519 aa21.08■□□□□ 0.97
FDPS-221ENST00000612683 USP6P35125 1406 aa21.07■□□□□ 0.96
FDPS-221ENST00000612683 TRIM37O94972 964 aa21.07■□□□□ 0.96
FDPS-221ENST00000612683 ZNF692Q9BU19 519 aaPredicted RBP21.07■□□□□ 0.96
FDPS-221ENST00000612683 THSD7AQ9UPZ6 1657 aa21.07■□□□□ 0.96
FDPS-221ENST00000612683 TRPM1Q7Z4N2 1603 aa21.07■□□□□ 0.96
FDPS-221ENST00000612683 NRKQ7Z2Y5 1582 aa21.06■□□□□ 0.96
FDPS-221ENST00000612683 PSDA5PKW4 1024 aaPredicted RBP21.05■□□□□ 0.96
FDPS-221ENST00000612683 THRAP3Q9Y2W1 955 aaKnown RBP21.04■□□□□ 0.96
FDPS-221ENST00000612683 SRCAPQ6ZRS2 3230 aa21.03■□□□□ 0.96
FDPS-221ENST00000612683 RGPD1P0DJD0 1748 aa21.02■□□□□ 0.96
FDPS-221ENST00000612683 APBA3O96018 575 aa21.02■□□□□ 0.96
FDPS-221ENST00000612683 EZH2Q15910 746 aaKnown RBP21.02■□□□□ 0.96
FDPS-221ENST00000612683 TTC21BQ7Z4L5 1316 aa21.02■□□□□ 0.95
FDPS-221ENST00000612683 CARD11Q9BXL7 1154 aa21.01■□□□□ 0.95
FDPS-221ENST00000612683 LMO7Q8WWI1 1683 aa21■□□□□ 0.95
FDPS-221ENST00000612683 AATKQ6ZMQ8 1374 aa20.99■□□□□ 0.95
FDPS-221ENST00000612683 SOX12O15370 315 aa20.99■□□□□ 0.95
FDPS-221ENST00000612683 TOM1L2Q6ZVM7 507 aa20.99■□□□□ 0.95
FDPS-221ENST00000612683 CAMKK2Q96RR4 588 aa20.99■□□□□ 0.95
FDPS-221ENST00000612683 KCNH5Q8NCM2 988 aa20.98■□□□□ 0.95
FDPS-221ENST00000612683 COL5A2P05997 1499 aaPredicted RBP20.98■□□□□ 0.95
FDPS-221ENST00000612683 CRB1P82279 1406 aa20.97■□□□□ 0.95
FDPS-221ENST00000612683 R3HDM1Q15032 1099 aaKnown RBP20.97■□□□□ 0.95
FDPS-221ENST00000612683 AXIN2Q9Y2T1 843 aa20.97■□□□□ 0.95
FDPS-221ENST00000612683 TTC21AQ8NDW8 1320 aa20.97■□□□□ 0.95
FDPS-221ENST00000612683 DISP2A7MBM2 1401 aa20.96■□□□□ 0.95
FDPS-221ENST00000612683 SLIT3O75094 1523 aa20.96■□□□□ 0.95
FDPS-221ENST00000612683 KTN1Q86UP2 1357 aaKnown RBP20.96■□□□□ 0.95
FDPS-221ENST00000612683 ARHGEF25Q86VW2 580 aa20.95■□□□□ 0.94
FDPS-221ENST00000612683 TONSLQ96HA7 1378 aa20.95■□□□□ 0.94
FDPS-221ENST00000612683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.94■□□□□ 0.94
FDPS-221ENST00000612683 TMC1Q8TDI8 760 aa20.94■□□□□ 0.94
FDPS-221ENST00000612683 TNS1Q9HBL0 1735 aaKnown RBP20.94■□□□□ 0.94
FDPS-221ENST00000612683 PIK3C2AO00443 1686 aa20.93■□□□□ 0.94
FDPS-221ENST00000612683 CSB-PGBD3P0DP91 1061 aa20.93■□□□□ 0.94
FDPS-221ENST00000612683 CPSF1Q10570 1443 aaKnown RBP20.93■□□□□ 0.94
FDPS-221ENST00000612683 C11orf95C9JLR9 678 aaPredicted RBP20.92■□□□□ 0.94
FDPS-221ENST00000612683 DDB1Q16531 1140 aa20.92■□□□□ 0.94
FDPS-221ENST00000612683 AKAP12Q02952 1782 aa20.91■□□□□ 0.94
FDPS-221ENST00000612683 WDR17Q8IZU2 1322 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms