RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CCDC146Q8IYE0 955 aa19.15■□□□□ 0.66
CDH1-213ENST00000612417 CD163L1Q9NR16 1453 aa19.14■□□□□ 0.65
CDH1-213ENST00000612417 E9PSI1 815 aa19.14■□□□□ 0.65
CDH1-213ENST00000612417 ZBTB47Q9UFB7 747 aaPredicted RBP19.14■□□□□ 0.65
CDH1-213ENST00000612417 NSD2O96028 1365 aa19.14■□□□□ 0.65
CDH1-213ENST00000612417 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.14■□□□□ 0.65
CDH1-213ENST00000612417 PPIP5K1Q6PFW1 1433 aa19.13■□□□□ 0.65
CDH1-213ENST00000612417 CENPQQ7L2Z9 268 aaPredicted RBP19.13■□□□□ 0.65
CDH1-213ENST00000612417 GGNBP2Q9H3C7 697 aa19.12■□□□□ 0.65
CDH1-213ENST00000612417 CCDC61Q9Y6R9 512 aa19.12■□□□□ 0.65
CDH1-213ENST00000612417 NCKAP5LQ9HCH0 1330 aa19.11■□□□□ 0.65
CDH1-213ENST00000612417 SPINK5Q9NQ38 1064 aaPredicted RBP19.11■□□□□ 0.65
CDH1-213ENST00000612417 ATP7BP35670 1465 aa19.11■□□□□ 0.65
CDH1-213ENST00000612417 NUTM2FA1L443 756 aa19.1■□□□□ 0.65
CDH1-213ENST00000612417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.1■□□□□ 0.65
CDH1-213ENST00000612417 PTCH1Q13635 1447 aa19.1■□□□□ 0.65
CDH1-213ENST00000612417 FYB1O15117 783 aa19.09■□□□□ 0.65
CDH1-213ENST00000612417 KCNA6P17658 529 aa19.09■□□□□ 0.65
CDH1-213ENST00000612417 IQSEC2Q5JU85 1478 aa19.09■□□□□ 0.65
CDH1-213ENST00000612417 PIK3R4Q99570 1358 aa19.09■□□□□ 0.65
CDH1-213ENST00000612417 ADGRB2O60241 1585 aa19.08■□□□□ 0.65
CDH1-213ENST00000612417 XRN1Q8IZH2 1706 aaKnown RBP19.07■□□□□ 0.64
CDH1-213ENST00000612417 PRR36Q9H6K5 1346 aa19.07■□□□□ 0.64
CDH1-213ENST00000612417 MTHFSP49914 203 aa19.07■□□□□ 0.64
CDH1-213ENST00000612417 KIF20BQ96Q89 1820 aa19.06■□□□□ 0.64
CDH1-213ENST00000612417 NPHP4O75161 1426 aaPredicted RBP19.05■□□□□ 0.64
CDH1-213ENST00000612417 WWC1Q8IX03 1113 aa19.05■□□□□ 0.64
CDH1-213ENST00000612417 CFAP53Q96M91 514 aa19.05■□□□□ 0.64
CDH1-213ENST00000612417 CHD2O14647 1828 aaKnown RBP19.05■□□□□ 0.64
CDH1-213ENST00000612417 CPSF1Q10570 1443 aaKnown RBP19.04■□□□□ 0.64
CDH1-213ENST00000612417 ANKRD26Q9UPS8 1709 aa19.04■□□□□ 0.64
CDH1-213ENST00000612417 ITSN1Q15811 1721 aa19.04■□□□□ 0.64
CDH1-213ENST00000612417 CDC42BPGQ6DT37 1551 aa19.04■□□□□ 0.64
CDH1-213ENST00000612417 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
CDH1-213ENST00000612417 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
CDH1-213ENST00000612417 NCBP3Q53F19 620 aaKnown RBP19.02■□□□□ 0.64
CDH1-213ENST00000612417 RUNDC1Q96C34 613 aa19.02■□□□□ 0.64
CDH1-213ENST00000612417 ZNF692Q9BU19 519 aaPredicted RBP19.02■□□□□ 0.64
CDH1-213ENST00000612417 EDC4Q6P2E9 1401 aaKnown RBP19.02■□□□□ 0.64
CDH1-213ENST00000612417 PDE3AQ14432 1141 aa19.02■□□□□ 0.63
CDH1-213ENST00000612417 NPM2Q86SE8 214 aaKnown RBP19.02■□□□□ 0.63
CDH1-213ENST00000612417 AKAP12Q02952 1782 aa19.01■□□□□ 0.63
CDH1-213ENST00000612417 BCAR3O75815 825 aa19.01■□□□□ 0.63
CDH1-213ENST00000612417 SKAP1Q86WV1 359 aa19■□□□□ 0.63
CDH1-213ENST00000612417 ACEP12821 1306 aa19■□□□□ 0.63
CDH1-213ENST00000612417 VIRMAQ69YN4 1812 aaKnown RBP19■□□□□ 0.63
CDH1-213ENST00000612417 MON2Q7Z3U7 1717 aa18.99■□□□□ 0.63
CDH1-213ENST00000612417 NME9Q86XW9 330 aa18.99■□□□□ 0.63
CDH1-213ENST00000612417 PLEKHG3A1L390 1219 aa18.99■□□□□ 0.63
CDH1-213ENST00000612417 CCDC27Q2M243 656 aa18.99■□□□□ 0.63
CDH1-213ENST00000612417 RBM33Q96EV2 1170 aaKnown RBP18.99■□□□□ 0.63
CDH1-213ENST00000612417 RGPD8O14715 1765 aaPredicted RBP18.98■□□□□ 0.63
CDH1-213ENST00000612417 NBR1Q14596 966 aa18.98■□□□□ 0.63
CDH1-213ENST00000612417 TOPAZ1Q8N9V7 1692 aa18.98■□□□□ 0.63
CDH1-213ENST00000612417 WDR63Q8IWG1 891 aa18.97■□□□□ 0.63
CDH1-213ENST00000612417 PMFBP1Q8TBY8 1022 aa18.97■□□□□ 0.63
CDH1-213ENST00000612417 DDRGK1Q96HY6 314 aa18.97■□□□□ 0.63
CDH1-213ENST00000612417 TCP11L2Q8N4U5 519 aa18.96■□□□□ 0.63
CDH1-213ENST00000612417 FAM161AQ3B820 660 aa18.96■□□□□ 0.63
CDH1-213ENST00000612417 NGDNQ8NEJ9 315 aaKnown RBP18.96■□□□□ 0.63
CDH1-213ENST00000612417 COG3Q96JB2 828 aa18.96■□□□□ 0.63
CDH1-213ENST00000612417 ZRANB1Q9UGI0 708 aa18.96■□□□□ 0.63
CDH1-213ENST00000612417 C14orf37Q86TY3 774 aa18.95■□□□□ 0.62
CDH1-213ENST00000612417 PPM1GO15355 546 aaPredicted RBP18.94■□□□□ 0.62
CDH1-213ENST00000612417 FBLN1P23142 703 aa18.94■□□□□ 0.62
CDH1-213ENST00000612417 DEKP35659 375 aaKnown RBP18.94■□□□□ 0.62
CDH1-213ENST00000612417 C8orf34Q49A92 452 aa18.94■□□□□ 0.62
CDH1-213ENST00000612417 MAP2P11137 1827 aaKnown RBP18.94■□□□□ 0.62
CDH1-213ENST00000612417 AAMPQ13685 434 aa18.93■□□□□ 0.62
CDH1-213ENST00000612417 TTC21BQ7Z4L5 1316 aa18.93■□□□□ 0.62
CDH1-213ENST00000612417 KDM4FA0A1W2PPD8 638 aa18.93■□□□□ 0.62
CDH1-213ENST00000612417 NALCNQ8IZF0 1738 aa18.92■□□□□ 0.62
CDH1-213ENST00000612417 U2AF1L5P0DN76 240 aaPredicted RBP18.92■□□□□ 0.62
CDH1-213ENST00000612417 HSPA2P54652 639 aa18.92■□□□□ 0.62
CDH1-213ENST00000612417 U2AF1Q01081 240 aaKnown RBP eCLIP18.92■□□□□ 0.62
CDH1-213ENST00000612417 FMN2Q9NZ56 1722 aa18.92■□□□□ 0.62
CDH1-213ENST00000612417 RTL5Q5HYW3 569 aaPredicted RBP18.91■□□□□ 0.62
CDH1-213ENST00000612417 U2SURPO15042 1029 aaKnown RBP18.91■□□□□ 0.62
CDH1-213ENST00000612417 USP6P35125 1406 aa18.91■□□□□ 0.62
CDH1-213ENST00000612417 RARSP54136 660 aaKnown RBP18.91■□□□□ 0.62
CDH1-213ENST00000612417 ANKARQ7Z5J8 1434 aa18.91■□□□□ 0.62
CDH1-213ENST00000612417 CLUAP1Q96AJ1 413 aa18.9■□□□□ 0.62
CDH1-213ENST00000612417 POLKQ9UBT6 870 aa18.9■□□□□ 0.62
CDH1-213ENST00000612417 COL3A1P02461 1466 aaPredicted RBP18.9■□□□□ 0.62
CDH1-213ENST00000612417 PROSER2Q86WR7 435 aaPredicted RBP18.89■□□□□ 0.62
CDH1-213ENST00000612417 USP35Q9P2H5 1018 aa18.89■□□□□ 0.61
CDH1-213ENST00000612417 RRP7AQ9Y3A4 280 aaKnown RBP18.89■□□□□ 0.61
CDH1-213ENST00000612417 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
CDH1-213ENST00000612417 NEUROD2Q15784 382 aa18.88■□□□□ 0.61
CDH1-213ENST00000612417 ADGRL3Q9HAR2 1447 aa18.87■□□□□ 0.61
CDH1-213ENST00000612417 NRKQ7Z2Y5 1582 aa18.87■□□□□ 0.61
CDH1-213ENST00000612417 CANXP27824 592 aaKnown RBP18.87■□□□□ 0.61
CDH1-213ENST00000612417 IGHDP01880 384 aa18.86■□□□□ 0.61
CDH1-213ENST00000612417 MYH16Q9H6N6 1097 aa18.86■□□□□ 0.61
CDH1-213ENST00000612417 EMILIN1Q9Y6C2 1016 aa18.86■□□□□ 0.61
CDH1-213ENST00000612417 PANK1Q8TE04 598 aa18.86■□□□□ 0.61
CDH1-213ENST00000612417 RRS1Q15050 365 aaKnown RBP18.85■□□□□ 0.61
CDH1-213ENST00000612417 COG6Q9Y2V7 657 aa18.85■□□□□ 0.61
CDH1-213ENST00000612417 TTC21AQ8NDW8 1320 aa18.85■□□□□ 0.61
CDH1-213ENST00000612417 MAPK8IP3Q9UPT6 1336 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms