RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 AKAP12Q02952 1782 aa21.86■■□□□ 1.09
CLTCL1-207ENST00000611723 EDC4Q6P2E9 1401 aaKnown RBP21.85■■□□□ 1.09
CLTCL1-207ENST00000611723 SSH2Q76I76 1423 aa21.85■■□□□ 1.09
CLTCL1-207ENST00000611723 USP6P35125 1406 aa21.84■■□□□ 1.09
CLTCL1-207ENST00000611723 BRINP3Q76B58 766 aa21.84■■□□□ 1.09
CLTCL1-207ENST00000611723 KIF1AQ12756 1690 aa21.84■■□□□ 1.09
CLTCL1-207ENST00000611723 UPF1Q92900 1129 aaKnown RBP eCLIP21.83■■□□□ 1.09
CLTCL1-207ENST00000611723 MON2Q7Z3U7 1717 aa21.83■■□□□ 1.08
CLTCL1-207ENST00000611723 CGNL1Q0VF96 1302 aa21.82■■□□□ 1.08
CLTCL1-207ENST00000611723 FOXO3O43524 673 aa21.82■■□□□ 1.08
CLTCL1-207ENST00000611723 PSME1Q06323 249 aa21.81■■□□□ 1.08
CLTCL1-207ENST00000611723 TTC21BQ7Z4L5 1316 aa21.8■■□□□ 1.08
CLTCL1-207ENST00000611723 ANP32CO43423 234 aa21.8■■□□□ 1.08
CLTCL1-207ENST00000611723 MEX3CQ5U5Q3 659 aaKnown RBP21.8■■□□□ 1.08
CLTCL1-207ENST00000611723 TTC21AQ8NDW8 1320 aa21.8■■□□□ 1.08
CLTCL1-207ENST00000611723 NSD2O96028 1365 aa21.79■■□□□ 1.08
CLTCL1-207ENST00000611723 FYB1O15117 783 aa21.79■■□□□ 1.08
CLTCL1-207ENST00000611723 NPHP3Q7Z494 1330 aa21.79■■□□□ 1.08
CLTCL1-207ENST00000611723 KRT28Q7Z3Y7 464 aa21.78■■□□□ 1.08
CLTCL1-207ENST00000611723 PRKRIP1Q9H875 184 aaPredicted RBP21.78■■□□□ 1.08
CLTCL1-207ENST00000611723 SPATA31A6Q5VVP1 1343 aa21.78■■□□□ 1.08
CLTCL1-207ENST00000611723 AHDC1Q5TGY3 1603 aaPredicted RBP21.77■■□□□ 1.08
CLTCL1-207ENST00000611723 RALBP1Q15311 655 aa21.77■■□□□ 1.08
CLTCL1-207ENST00000611723 SHPRHQ149N8 1683 aa21.76■■□□□ 1.07
CLTCL1-207ENST00000611723 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.76■■□□□ 1.07
CLTCL1-207ENST00000611723 NRKQ7Z2Y5 1582 aa21.75■■□□□ 1.07
CLTCL1-207ENST00000611723 CC2D1BQ5T0F9 858 aaKnown RBP21.75■■□□□ 1.07
CLTCL1-207ENST00000611723 ZNF772Q68DY9 489 aaPredicted RBP21.75■■□□□ 1.07
CLTCL1-207ENST00000611723 SOS2Q07890 1332 aaPredicted RBP21.74■■□□□ 1.07
CLTCL1-207ENST00000611723 SBNO1A3KN83 1393 aa21.74■■□□□ 1.07
CLTCL1-207ENST00000611723 PARD3Q8TEW0 1356 aa21.74■■□□□ 1.07
CLTCL1-207ENST00000611723 NUTM2BA6NNL0 878 aaPredicted RBP21.73■■□□□ 1.07
CLTCL1-207ENST00000611723 NUTM2EB1AL46 878 aaPredicted RBP21.73■■□□□ 1.07
CLTCL1-207ENST00000611723 NME9Q86XW9 330 aa21.73■■□□□ 1.07
CLTCL1-207ENST00000611723 NUTM2AQ8IVF1 878 aaPredicted RBP21.73■■□□□ 1.07
CLTCL1-207ENST00000611723 USP31Q70CQ4 1352 aa21.73■■□□□ 1.07
CLTCL1-207ENST00000611723 GGNBP2Q9H3C7 697 aa21.72■■□□□ 1.07
CLTCL1-207ENST00000611723 MIER1Q8N108 512 aa21.71■■□□□ 1.07
CLTCL1-207ENST00000611723 DDX17Q92841 729 aaKnown RBP21.71■■□□□ 1.07
CLTCL1-207ENST00000611723 PXDNQ92626 1479 aa21.71■■□□□ 1.07
CLTCL1-207ENST00000611723 XPCQ01831 940 aaPredicted RBP21.7■■□□□ 1.06
CLTCL1-207ENST00000611723 MORC1Q86VD1 984 aa21.7■■□□□ 1.06
CLTCL1-207ENST00000611723 PAK3O75914 559 aaPredicted RBP21.69■■□□□ 1.06
CLTCL1-207ENST00000611723 RXRBP28702 533 aa21.69■■□□□ 1.06
CLTCL1-207ENST00000611723 TRPM3Q9HCF6 1732 aaPredicted RBP21.69■■□□□ 1.06
CLTCL1-207ENST00000611723 ABTB2Q8N961 1025 aa21.68■■□□□ 1.06
CLTCL1-207ENST00000611723 COG3Q96JB2 828 aa21.68■■□□□ 1.06
CLTCL1-207ENST00000611723 ZRANB1Q9UGI0 708 aa21.68■■□□□ 1.06
CLTCL1-207ENST00000611723 NHSL1Q5SYE7 1610 aa21.68■■□□□ 1.06
CLTCL1-207ENST00000611723 KIF20BQ96Q89 1820 aa21.68■■□□□ 1.06
CLTCL1-207ENST00000611723 SPATA31A3Q5VYP0 1347 aa21.67■■□□□ 1.06
CLTCL1-207ENST00000611723 OVOS2A0A0J9YW53 1432 aa21.66■■□□□ 1.06
CLTCL1-207ENST00000611723 OVOS2Q6IE36 1432 aa21.66■■□□□ 1.06
CLTCL1-207ENST00000611723 NLRP6P59044 892 aa21.66■■□□□ 1.06
CLTCL1-207ENST00000611723 CNGB1Q14028 1251 aaPredicted RBP21.66■■□□□ 1.06
CLTCL1-207ENST00000611723 ANKRD26Q9UPS8 1709 aa21.66■■□□□ 1.06
CLTCL1-207ENST00000611723 AFF2P51816 1311 aa21.65■■□□□ 1.06
CLTCL1-207ENST00000611723 MYBBP1AQ9BQG0 1328 aaKnown RBP21.65■■□□□ 1.06
CLTCL1-207ENST00000611723 PIK3C2AO00443 1686 aa21.64■■□□□ 1.05
CLTCL1-207ENST00000611723 CCER2I3L3R5 266 aa21.64■■□□□ 1.05
CLTCL1-207ENST00000611723 NLRP13Q86W25 1043 aa21.64■■□□□ 1.05
CLTCL1-207ENST00000611723 TNS3Q68CZ2 1445 aa21.63■■□□□ 1.05
CLTCL1-207ENST00000611723 USP54Q70EL1 1684 aa21.63■■□□□ 1.05
CLTCL1-207ENST00000611723 PPP2R1AP30153 589 aa21.63■■□□□ 1.05
CLTCL1-207ENST00000611723 ALS2Q96Q42 1657 aa21.63■■□□□ 1.05
CLTCL1-207ENST00000611723 CDK12Q9NYV4 1490 aaPredicted RBP21.62■■□□□ 1.05
CLTCL1-207ENST00000611723 ARHGEF10O15013 1369 aa21.61■■□□□ 1.05
CLTCL1-207ENST00000611723 AATKQ6ZMQ8 1374 aa21.61■■□□□ 1.05
CLTCL1-207ENST00000611723 LRRC59Q96AG4 307 aaKnown RBP21.61■■□□□ 1.05
CLTCL1-207ENST00000611723 RGS12O14924 1447 aa21.61■■□□□ 1.05
CLTCL1-207ENST00000611723 USP19O94966 1318 aa21.59■■□□□ 1.05
CLTCL1-207ENST00000611723 NUTM2GQ5VZR2 741 aa21.58■■□□□ 1.05
CLTCL1-207ENST00000611723 LMOD2Q6P5Q4 547 aa21.58■■□□□ 1.05
CLTCL1-207ENST00000611723 TNNT2P45379 298 aaPredicted RBP21.57■■□□□ 1.04
CLTCL1-207ENST00000611723 KCNH5Q8NCM2 988 aa21.57■■□□□ 1.04
CLTCL1-207ENST00000611723 C8orf37Q96NL8 207 aa21.57■■□□□ 1.04
CLTCL1-207ENST00000611723 MARF1Q9Y4F3 1742 aaKnown RBP21.57■■□□□ 1.04
CLTCL1-207ENST00000611723 POLKQ9UBT6 870 aa21.55■■□□□ 1.04
CLTCL1-207ENST00000611723 SLIT3O75094 1523 aa21.55■■□□□ 1.04
CLTCL1-207ENST00000611723 PNPLA6Q8IY17 1366 aa21.54■■□□□ 1.04
CLTCL1-207ENST00000611723 GCP02774 474 aa21.54■■□□□ 1.04
CLTCL1-207ENST00000611723 FBLN1P23142 703 aa21.53■■□□□ 1.04
CLTCL1-207ENST00000611723 MTHFSP49914 203 aa21.53■■□□□ 1.04
CLTCL1-207ENST00000611723 QTRT2Q9H974 415 aaKnown RBP21.53■■□□□ 1.04
CLTCL1-207ENST00000611723 INSRP06213 1382 aa21.51■■□□□ 1.03
CLTCL1-207ENST00000611723 CCDC184Q52MB2 194 aa21.51■■□□□ 1.03
CLTCL1-207ENST00000611723 SMG6Q86US8 1419 aaKnown RBP21.51■■□□□ 1.03
CLTCL1-207ENST00000611723 MAP2P11137 1827 aaKnown RBP21.5■■□□□ 1.03
CLTCL1-207ENST00000611723 RBM6P78332 1123 aaKnown RBP21.5■■□□□ 1.03
CLTCL1-207ENST00000611723 NFAT5O94916 1531 aa21.5■■□□□ 1.03
CLTCL1-207ENST00000611723 ADAMTS2O95450 1211 aa21.49■■□□□ 1.03
CLTCL1-207ENST00000611723 RRS1Q15050 365 aaKnown RBP21.49■■□□□ 1.03
CLTCL1-207ENST00000611723 KIF24Q5T7B8 1368 aa21.48■■□□□ 1.03
CLTCL1-207ENST00000611723 ARHGEF25Q86VW2 580 aa21.48■■□□□ 1.03
CLTCL1-207ENST00000611723 MRS2Q9HD23 443 aa21.48■■□□□ 1.03
CLTCL1-207ENST00000611723 EMILIN1Q9Y6C2 1016 aa21.48■■□□□ 1.03
CLTCL1-207ENST00000611723 MAP3K19Q56UN5 1328 aa21.48■■□□□ 1.03
CLTCL1-207ENST00000611723 CABLES1Q8TDN4 633 aa21.47■■□□□ 1.03
CLTCL1-207ENST00000611723 CRYBG1Q9Y4K1 1723 aa21.46■■□□□ 1.03
CLTCL1-207ENST00000611723 SOX12O15370 315 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms