RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 PRR36Q9H6K5 1346 aa25.54■■□□□ 1.68
MUC1-224ENST00000611577 COL14A1Q05707 1796 aaKnown RBP25.53■■□□□ 1.68
MUC1-224ENST00000611577 BAG6P46379 1132 aa25.51■■□□□ 1.67
MUC1-224ENST00000611577 KDM2AQ9Y2K7 1162 aa25.5■■□□□ 1.67
MUC1-224ENST00000611577 WASLO00401 505 aaPredicted RBP25.49■■□□□ 1.67
MUC1-224ENST00000611577 NGDNQ8NEJ9 315 aaKnown RBP25.48■■□□□ 1.67
MUC1-224ENST00000611577 LRP5O75197 1615 aa25.48■■□□□ 1.67
MUC1-224ENST00000611577 PAK3O75914 559 aaPredicted RBP25.47■■□□□ 1.67
MUC1-224ENST00000611577 DCAF11Q8TEB1 546 aa25.47■■□□□ 1.67
MUC1-224ENST00000611577 SPATA31A5Q5VU36 1347 aa25.46■■□□□ 1.67
MUC1-224ENST00000611577 SPATA31A7Q8IWB4 1347 aa25.46■■□□□ 1.67
MUC1-224ENST00000611577 PSDA5PKW4 1024 aaPredicted RBP25.46■■□□□ 1.67
MUC1-224ENST00000611577 NEUROD1Q13562 356 aa25.46■■□□□ 1.67
MUC1-224ENST00000611577 CRYBG1Q9Y4K1 1723 aa25.46■■□□□ 1.67
MUC1-224ENST00000611577 PRDM11Q9NQV5 511 aa25.44■■□□□ 1.66
MUC1-224ENST00000611577 FAM182BQ5T319 152 aa25.43■■□□□ 1.66
MUC1-224ENST00000611577 SIN3AQ96ST3 1273 aa25.43■■□□□ 1.66
MUC1-224ENST00000611577 RGPD1P0DJD0 1748 aa25.43■■□□□ 1.66
MUC1-224ENST00000611577 THSD7AQ9UPZ6 1657 aa25.42■■□□□ 1.66
MUC1-224ENST00000611577 ATP7BP35670 1465 aa25.41■■□□□ 1.66
MUC1-224ENST00000611577 EN1Q05925 392 aaPredicted RBP25.41■■□□□ 1.66
MUC1-224ENST00000611577 ITSN1Q15811 1721 aa25.4■■□□□ 1.66
MUC1-224ENST00000611577 ARHGEF28Q8N1W1 1705 aaKnown RBP25.4■■□□□ 1.66
MUC1-224ENST00000611577 KIAA0232Q92628 1395 aa25.39■■□□□ 1.65
MUC1-224ENST00000611577 NUDT16Q96DE0 195 aaKnown RBP25.38■■□□□ 1.65
MUC1-224ENST00000611577 STAC3Q96MF2 364 aa25.38■■□□□ 1.65
MUC1-224ENST00000611577 CHRNA2Q15822 529 aa25.36■■□□□ 1.65
MUC1-224ENST00000611577 PHRF1Q9P1Y6 1649 aaKnown RBP25.36■■□□□ 1.65
MUC1-224ENST00000611577 DISP2A7MBM2 1401 aa25.36■■□□□ 1.65
MUC1-224ENST00000611577 SPATA31A1Q5TZJ5 1347 aa25.36■■□□□ 1.65
MUC1-224ENST00000611577 STRN4Q9NRL3 753 aa25.35■■□□□ 1.65
MUC1-224ENST00000611577 TNS1Q9HBL0 1735 aaKnown RBP25.34■■□□□ 1.65
MUC1-224ENST00000611577 NUTM2GQ5VZR2 741 aa25.33■■□□□ 1.65
MUC1-224ENST00000611577 ZC3H6P61129 1189 aaKnown RBP25.32■■□□□ 1.64
MUC1-224ENST00000611577 R3HDM1Q15032 1099 aaKnown RBP25.32■■□□□ 1.64
MUC1-224ENST00000611577 CCER1Q8TC90 406 aaPredicted RBP25.32■■□□□ 1.64
MUC1-224ENST00000611577 CDK19Q9BWU1 502 aa25.31■■□□□ 1.64
MUC1-224ENST00000611577 TONSLQ96HA7 1378 aa25.31■■□□□ 1.64
MUC1-224ENST00000611577 TOPAZ1Q8N9V7 1692 aa25.29■■□□□ 1.64
MUC1-224ENST00000611577 EZH2Q15910 746 aaKnown RBP25.29■■□□□ 1.64
MUC1-224ENST00000611577 POLR3AO14802 1390 aaPredicted RBP25.29■■□□□ 1.64
MUC1-224ENST00000611577 TRIM37O94972 964 aa25.28■■□□□ 1.64
MUC1-224ENST00000611577 FAM196AQ6ZSG2 479 aa25.28■■□□□ 1.64
MUC1-224ENST00000611577 L3MBTL2Q969R5 705 aa25.28■■□□□ 1.64
MUC1-224ENST00000611577 USP35Q9P2H5 1018 aa25.28■■□□□ 1.64
MUC1-224ENST00000611577 ACEP12821 1306 aa25.28■■□□□ 1.64
MUC1-224ENST00000611577 SSH2Q76I76 1423 aa25.27■■□□□ 1.64
MUC1-224ENST00000611577 NRKQ7Z2Y5 1582 aa25.27■■□□□ 1.64
MUC1-224ENST00000611577 NBPF8Q3BBV2 869 aa25.26■■□□□ 1.63
MUC1-224ENST00000611577 EVA1CP58658 441 aa25.25■■□□□ 1.63
MUC1-224ENST00000611577 CCDC61Q9Y6R9 512 aa25.25■■□□□ 1.63
MUC1-224ENST00000611577 CLSPNQ9HAW4 1339 aa25.24■■□□□ 1.63
MUC1-224ENST00000611577 CAMKK2Q96RR4 588 aa25.24■■□□□ 1.63
MUC1-224ENST00000611577 PLEKHG3A1L390 1219 aa25.22■■□□□ 1.63
MUC1-224ENST00000611577 APBA3O96018 575 aa25.22■■□□□ 1.63
MUC1-224ENST00000611577 BARGINQ6ZT62 677 aa25.22■■□□□ 1.63
MUC1-224ENST00000611577 ABTB2Q8N961 1025 aa25.22■■□□□ 1.63
MUC1-224ENST00000611577 PARD3Q8TEW0 1356 aa25.21■■□□□ 1.63
MUC1-224ENST00000611577 KIAA1210Q9ULL0 1709 aa25.21■■□□□ 1.63
MUC1-224ENST00000611577 CAMTA1Q9Y6Y1 1673 aa25.21■■□□□ 1.63
MUC1-224ENST00000611577 PDE3BQ13370 1112 aa25.21■■□□□ 1.63
MUC1-224ENST00000611577 LARP1Q6PKG0 1096 aaKnown RBP25.2■■□□□ 1.62
MUC1-224ENST00000611577 CPDO75976 1380 aa25.19■■□□□ 1.62
MUC1-224ENST00000611577 USP19O94966 1318 aa25.19■■□□□ 1.62
MUC1-224ENST00000611577 LMO7Q8WWI1 1683 aa25.19■■□□□ 1.62
MUC1-224ENST00000611577 TCP11L2Q8N4U5 519 aa25.18■■□□□ 1.62
MUC1-224ENST00000611577 PPIP5K1Q6PFW1 1433 aa25.17■■□□□ 1.62
MUC1-224ENST00000611577 SRPK2P78362 688 aaKnown RBP25.16■■□□□ 1.62
MUC1-224ENST00000611577 NBPF1Q3BBV0 1214 aa25.16■■□□□ 1.62
MUC1-224ENST00000611577 RREB1Q92766 1687 aa25.16■■□□□ 1.62
MUC1-224ENST00000611577 NLRP13Q86W25 1043 aa25.14■■□□□ 1.62
MUC1-224ENST00000611577 NUP188Q5SRE5 1749 aa25.13■■□□□ 1.61
MUC1-224ENST00000611577 GCP02774 474 aa25.13■■□□□ 1.61
MUC1-224ENST00000611577 COL5A2P05997 1499 aaPredicted RBP25.13■■□□□ 1.61
MUC1-224ENST00000611577 CENPJQ9HC77 1338 aaPredicted RBP25.12■■□□□ 1.61
MUC1-224ENST00000611577 CABP2Q9NPB3 220 aa25.12■■□□□ 1.61
MUC1-224ENST00000611577 THRAP3Q9Y2W1 955 aaKnown RBP25.12■■□□□ 1.61
MUC1-224ENST00000611577 ZBTB7CA1YPR0 619 aa25.1■■□□□ 1.61
MUC1-224ENST00000611577 NBPF14Q5TI25 921 aa25.1■■□□□ 1.61
MUC1-224ENST00000611577 PARP4Q9UKK3 1724 aaKnown RBP25.09■■□□□ 1.61
MUC1-224ENST00000611577 TRPM1Q7Z4N2 1603 aa25.09■■□□□ 1.61
MUC1-224ENST00000611577 BRD4O60885 1362 aaPredicted RBP25.07■■□□□ 1.6
MUC1-224ENST00000611577 CRB1P82279 1406 aa25.07■■□□□ 1.6
MUC1-224ENST00000611577 QRICH2Q9H0J4 1663 aa25.07■■□□□ 1.6
MUC1-224ENST00000611577 USP6P35125 1406 aa25.06■■□□□ 1.6
MUC1-224ENST00000611577 ROCK2O75116 1388 aaKnown RBP25.05■■□□□ 1.6
MUC1-224ENST00000611577 TIMELESSQ9UNS1 1208 aa25.05■■□□□ 1.6
MUC1-224ENST00000611577 OVOS2A0A0G2JMS6 1433 aa25.04■■□□□ 1.6
MUC1-224ENST00000611577 OVOS2A0A0J9YW53 1432 aa25.04■■□□□ 1.6
MUC1-224ENST00000611577 OVOS2Q6IE36 1432 aa25.04■■□□□ 1.6
MUC1-224ENST00000611577 SLIT3O75094 1523 aa25.04■■□□□ 1.6
MUC1-224ENST00000611577 NLRP6P59044 892 aa25.04■■□□□ 1.6
MUC1-224ENST00000611577 CABP1Q9NZU7 370 aa25.04■■□□□ 1.6
MUC1-224ENST00000611577 C11orf95C9JLR9 678 aaPredicted RBP25.03■■□□□ 1.6
MUC1-224ENST00000611577 AATKQ6ZMQ8 1374 aa25.03■■□□□ 1.6
MUC1-224ENST00000611577 LRRC37A3O60309 1634 aa25.01■■□□□ 1.59
MUC1-224ENST00000611577 PEAK1Q9H792 1746 aa25.01■■□□□ 1.59
MUC1-224ENST00000611577 TOM1L2Q6ZVM7 507 aa25■■□□□ 1.59
MUC1-224ENST00000611577 PIK3C2AO00443 1686 aa24.99■■□□□ 1.59
MUC1-224ENST00000611577 DDB1Q16531 1140 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms