RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 SF3B2Q13435 895 aaKnown RBP18.87■□□□□ 0.61
TNXB-208ENST00000611016 RTEL1-TNFRSF6BF6WH68 1400 aa18.87■□□□□ 0.61
TNXB-208ENST00000611016 EHBP1L1Q8N3D4 1523 aa18.87■□□□□ 0.61
TNXB-208ENST00000611016 CCAR2Q8N163 923 aaKnown RBP18.86■□□□□ 0.61
TNXB-208ENST00000611016 TROQ12816 1431 aaPredicted RBP18.86■□□□□ 0.61
TNXB-208ENST00000611016 DCAF8L1A6NGE4 600 aa18.86■□□□□ 0.61
TNXB-208ENST00000611016 SETQ01105 290 aaPredicted RBP18.85■□□□□ 0.61
TNXB-208ENST00000611016 IKQ13123 557 aaPredicted RBP18.85■□□□□ 0.61
TNXB-208ENST00000611016 POGZQ7Z3K3 1410 aa18.85■□□□□ 0.61
TNXB-208ENST00000611016 CDC45O75419 566 aa18.85■□□□□ 0.61
TNXB-208ENST00000611016 ZNF530Q6P9A1 599 aaPredicted RBP18.85■□□□□ 0.61
TNXB-208ENST00000611016 EFCAB5A4FU69 1503 aa18.85■□□□□ 0.61
TNXB-208ENST00000611016 KIAA1107Q9UPP5 1409 aa18.85■□□□□ 0.61
TNXB-208ENST00000611016 KDM4AO75164 1064 aa18.85■□□□□ 0.61
TNXB-208ENST00000611016 CNNM1Q9NRU3 951 aa18.85■□□□□ 0.61
TNXB-208ENST00000611016 SPG7Q9UQ90 795 aa18.85■□□□□ 0.61
TNXB-208ENST00000611016 CDCA7LQ96GN5 454 aa18.84■□□□□ 0.61
TNXB-208ENST00000611016 HDGFL1Q5TGJ6 251 aa18.84■□□□□ 0.61
TNXB-208ENST00000611016 ZNF428Q96B54 188 aa18.84■□□□□ 0.61
TNXB-208ENST00000611016 C22orf23Q9BZE7 217 aa18.84■□□□□ 0.61
TNXB-208ENST00000611016 XPCQ01831 940 aaPredicted RBP18.84■□□□□ 0.61
TNXB-208ENST00000611016 POLA1P09884 1462 aaPredicted RBP18.83■□□□□ 0.61
TNXB-208ENST00000611016 ERBINQ96RT1 1412 aa18.83■□□□□ 0.61
TNXB-208ENST00000611016 SLC4A2P04920 1241 aa18.83■□□□□ 0.61
TNXB-208ENST00000611016 PRDM11Q9NQV5 511 aa18.83■□□□□ 0.6
TNXB-208ENST00000611016 TSR2Q969E8 191 aaKnown RBP18.82■□□□□ 0.6
TNXB-208ENST00000611016 C1orf115Q9H7X2 142 aa18.82■□□□□ 0.6
TNXB-208ENST00000611016 HECW1Q76N89 1606 aa18.82■□□□□ 0.6
TNXB-208ENST00000611016 BRMS1Q9HCU9 246 aa18.82■□□□□ 0.6
TNXB-208ENST00000611016 PSMA5P28066 241 aa18.81■□□□□ 0.6
TNXB-208ENST00000611016 TTC39AQ5SRH9 613 aa18.8■□□□□ 0.6
TNXB-208ENST00000611016 MYL6BP14649 208 aa18.8■□□□□ 0.6
TNXB-208ENST00000611016 NOB1Q9ULX3 412 aaKnown RBP18.8■□□□□ 0.6
TNXB-208ENST00000611016 GNAI2P04899 355 aa18.8■□□□□ 0.6
TNXB-208ENST00000611016 PNISRQ8TF01 805 aaKnown RBP18.8■□□□□ 0.6
TNXB-208ENST00000611016 XBP1P17861 261 aa18.8■□□□□ 0.6
TNXB-208ENST00000611016 SART3Q15020 963 aaKnown RBP18.8■□□□□ 0.6
TNXB-208ENST00000611016 CCDC73Q6ZRK6 1079 aa18.79■□□□□ 0.6
TNXB-208ENST00000611016 CNKSR2Q8WXI2 1034 aa18.79■□□□□ 0.6
TNXB-208ENST00000611016 RRS1Q15050 365 aaKnown RBP18.79■□□□□ 0.6
TNXB-208ENST00000611016 CCDC158Q5M9N0 1113 aa18.79■□□□□ 0.6
TNXB-208ENST00000611016 RPGRIP1LQ68CZ1 1315 aa18.78■□□□□ 0.6
TNXB-208ENST00000611016 SASS6Q6UVJ0 657 aa18.78■□□□□ 0.6
TNXB-208ENST00000611016 ERC1Q8IUD2 1116 aa18.78■□□□□ 0.6
TNXB-208ENST00000611016 GNL3LQ9NVN8 582 aaKnown RBP18.78■□□□□ 0.6
TNXB-208ENST00000611016 NBPF8Q3BBV2 869 aa18.78■□□□□ 0.6
TNXB-208ENST00000611016 RRP12Q5JTH9 1297 aaKnown RBP18.78■□□□□ 0.6
TNXB-208ENST00000611016 ZNF592Q92610 1267 aa18.77■□□□□ 0.6
TNXB-208ENST00000611016 HIP1O00291 1037 aa18.77■□□□□ 0.59
TNXB-208ENST00000611016 SLC3A2P08195 630 aaKnown RBP18.77■□□□□ 0.59
TNXB-208ENST00000611016 SIL1Q9H173 461 aa18.77■□□□□ 0.59
TNXB-208ENST00000611016 ZC3H6P61129 1189 aaKnown RBP18.76■□□□□ 0.59
TNXB-208ENST00000611016 DAPK1P53355 1430 aa18.75■□□□□ 0.59
TNXB-208ENST00000611016 LETM1O95202 739 aaPredicted RBP18.75■□□□□ 0.59
TNXB-208ENST00000611016 HSP90AA2PQ14568 343 aaPredicted RBP18.75■□□□□ 0.59
TNXB-208ENST00000611016 NAT10Q9H0A0 1025 aaKnown RBP18.75■□□□□ 0.59
TNXB-208ENST00000611016 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.75■□□□□ 0.59
TNXB-208ENST00000611016 MCM2P49736 904 aa18.74■□□□□ 0.59
TNXB-208ENST00000611016 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.74■□□□□ 0.59
TNXB-208ENST00000611016 CDR1P51861 262 aa18.74■□□□□ 0.59
TNXB-208ENST00000611016 SRCIN1Q9C0H9 1055 aa18.74■□□□□ 0.59
TNXB-208ENST00000611016 BTBD11A6QL63 1104 aa18.73■□□□□ 0.59
TNXB-208ENST00000611016 CCT4P50991 539 aaKnown RBP18.73■□□□□ 0.59
TNXB-208ENST00000611016 TOP2BQ02880 1626 aa18.73■□□□□ 0.59
TNXB-208ENST00000611016 ACBD3Q9H3P7 528 aa18.73■□□□□ 0.59
TNXB-208ENST00000611016 TEX35Q5T0J7 233 aa18.73■□□□□ 0.59
TNXB-208ENST00000611016 NUDT16Q96DE0 195 aaKnown RBP18.72■□□□□ 0.59
TNXB-208ENST00000611016 MPHOSPH8Q99549 860 aa18.72■□□□□ 0.59
TNXB-208ENST00000611016 ATAD2Q6PL18 1390 aa18.72■□□□□ 0.59
TNXB-208ENST00000611016 ANKRD30BQ9BXX2 1392 aa18.72■□□□□ 0.59
TNXB-208ENST00000611016 ATP2B1P20020 1258 aa18.72■□□□□ 0.59
TNXB-208ENST00000611016 CCAR1Q8IX12 1150 aaKnown RBP18.72■□□□□ 0.59
TNXB-208ENST00000611016 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.72■□□□□ 0.595e-6■■□□□ 11.5
TNXB-208ENST00000611016 CT47B1P0C2W7 299 aaPredicted RBP18.72■□□□□ 0.59
TNXB-208ENST00000611016 PDZRN3Q9UPQ7 1066 aa18.71■□□□□ 0.59
TNXB-208ENST00000611016 R3HCC1Q9Y3T6 440 aaKnown RBP18.71■□□□□ 0.59
TNXB-208ENST00000611016 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
TNXB-208ENST00000611016 BCAR3O75815 825 aa18.71■□□□□ 0.59
TNXB-208ENST00000611016 ATP2B2Q01814 1243 aa18.71■□□□□ 0.59
TNXB-208ENST00000611016 STK11IPQ8N1F8 1099 aa18.71■□□□□ 0.59
TNXB-208ENST00000611016 HMGXB3Q12766 1538 aa18.71■□□□□ 0.59
TNXB-208ENST00000611016 CCDC57Q2TAC2 916 aa18.71■□□□□ 0.59
TNXB-208ENST00000611016 HOMER1Q86YM7 354 aa18.71■□□□□ 0.59
TNXB-208ENST00000611016 GCC1Q96CN9 775 aa18.71■□□□□ 0.59
TNXB-208ENST00000611016 DHX8Q14562 1220 aaKnown RBP18.7■□□□□ 0.58
TNXB-208ENST00000611016 CDK13Q14004 1512 aaKnown RBP18.7■□□□□ 0.58
TNXB-208ENST00000611016 ARGLU1Q9NWB6 273 aaPredicted RBP18.7■□□□□ 0.58
TNXB-208ENST00000611016 SUPT6HQ7KZ85 1726 aaKnown RBP18.7■□□□□ 0.58
TNXB-208ENST00000611016 PRXQ9BXM0 1461 aa18.7■□□□□ 0.58
TNXB-208ENST00000611016 BICDL1Q6ZP65 573 aa18.69■□□□□ 0.58
TNXB-208ENST00000611016 NEK4P51957 841 aa18.69■□□□□ 0.58
TNXB-208ENST00000611016 NAP1L1P55209 391 aaKnown RBP18.69■□□□□ 0.58
TNXB-208ENST00000611016 OLFM4Q6UX06 510 aa18.69■□□□□ 0.58
TNXB-208ENST00000611016 LRRCC1Q9C099 1032 aa18.68■□□□□ 0.58
TNXB-208ENST00000611016 RBM5P52756 815 aaKnown RBP eCLIP18.68■□□□□ 0.58
TNXB-208ENST00000611016 WAPLQ7Z5K2 1190 aa18.68■□□□□ 0.58
TNXB-208ENST00000611016 SDF4Q9BRK5 362 aa18.68■□□□□ 0.58
TNXB-208ENST00000611016 EPS15P42566 896 aa18.68■□□□□ 0.58
TNXB-208ENST00000611016 CD109Q6YHK3 1445 aa18.68■□□□□ 0.58
TNXB-208ENST00000611016 MAP4K4O95819 1239 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms