RNA–Protein interactions for RNA: ENST00000609858.1

AC004948.1-201, humanhuman

BASIC

Gene AC004948.1, Length 672 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004948.1-201ENST00000609858 POLR1AO95602 1720 aaPredicted RBP9.59□□□□□ -0.87
AC004948.1-201ENST00000609858 KIF27Q86VH2 1401 aa9.58□□□□□ -0.88
AC004948.1-201ENST00000609858 MYO3AQ8NEV4 1616 aa9.58□□□□□ -0.88
AC004948.1-201ENST00000609858 SMYD5Q6GMV2 418 aa9.58□□□□□ -0.88
AC004948.1-201ENST00000609858 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.58□□□□□ -0.88
AC004948.1-201ENST00000609858 CTTNBP2Q8WZ74 1663 aa9.58□□□□□ -0.88
AC004948.1-201ENST00000609858 GGCXP38435 758 aa9.57□□□□□ -0.88
AC004948.1-201ENST00000609858 SHANK2Q9UPX8 1470 aa9.57□□□□□ -0.88
AC004948.1-201ENST00000609858 RAPGEF2Q9Y4G8 1499 aa9.57□□□□□ -0.88
AC004948.1-201ENST00000609858 SETBP1Q9Y6X0 1596 aa9.57□□□□□ -0.88
AC004948.1-201ENST00000609858 PLA2R1Q13018 1463 aa9.56□□□□□ -0.88
AC004948.1-201ENST00000609858 GPR37O15354 613 aa9.56□□□□□ -0.88
AC004948.1-201ENST00000609858 NKX2-3Q8TAU0 364 aa9.56□□□□□ -0.88
AC004948.1-201ENST00000609858 TRIM52Q96A61 297 aa9.56□□□□□ -0.88
AC004948.1-201ENST00000609858 NPDC1Q9NQX5 325 aaPredicted RBP9.56□□□□□ -0.88
AC004948.1-201ENST00000609858 TULP1O00294 542 aaPredicted RBP9.55□□□□□ -0.88
AC004948.1-201ENST00000609858 TTC13Q8NBP0 860 aa9.55□□□□□ -0.88
AC004948.1-201ENST00000609858 ZC3H15Q8WU90 426 aaKnown RBP9.55□□□□□ -0.88
AC004948.1-201ENST00000609858 V9GY48 417 aaPredicted RBP9.55□□□□□ -0.88
AC004948.1-201ENST00000609858 VWDEQ8N2E2 1590 aa9.54□□□□□ -0.88
AC004948.1-201ENST00000609858 NEURL4Q96JN8 1562 aa9.54□□□□□ -0.88
AC004948.1-201ENST00000609858 CEP170BQ9Y4F5 1589 aaPredicted RBP9.54□□□□□ -0.88
AC004948.1-201ENST00000609858 NRG2O14511 850 aaPredicted RBP9.54□□□□□ -0.88
AC004948.1-201ENST00000609858 TRAF7Q6Q0C0 670 aa9.54□□□□□ -0.88
AC004948.1-201ENST00000609858 RNF17Q9BXT8 1623 aaKnown RBP9.53□□□□□ -0.88
AC004948.1-201ENST00000609858 PRR14Q9BWN1 585 aa9.53□□□□□ -0.88
AC004948.1-201ENST00000609858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.52□□□□□ -0.88
AC004948.1-201ENST00000609858 LRRC7Q96NW7 1537 aa9.52□□□□□ -0.88
AC004948.1-201ENST00000609858 SCAPERQ9BY12 1400 aa9.52□□□□□ -0.89
AC004948.1-201ENST00000609858 DIP2CQ9Y2E4 1556 aa9.52□□□□□ -0.89
AC004948.1-201ENST00000609858 PCDHB3Q9Y5E6 796 aa9.52□□□□□ -0.89
AC004948.1-201ENST00000609858 XIRP1Q702N8 1843 aaKnown RBP9.52□□□□□ -0.89
AC004948.1-201ENST00000609858 MROH2AA6NES4 1674 aa9.51□□□□□ -0.89
AC004948.1-201ENST00000609858 ABCA6Q8N139 1617 aa9.51□□□□□ -0.89
AC004948.1-201ENST00000609858 GPIHBP1Q8IV16 184 aa9.5□□□□□ -0.89
AC004948.1-201ENST00000609858 EYA1Q99502 592 aa9.5□□□□□ -0.89
AC004948.1-201ENST00000609858 PDZRN3Q9UPQ7 1066 aa9.5□□□□□ -0.89
AC004948.1-201ENST00000609858 LCE2BO14633 110 aa9.49□□□□□ -0.89
AC004948.1-201ENST00000609858 ZPR1O75312 459 aa9.49□□□□□ -0.89
AC004948.1-201ENST00000609858 ZMYND10O75800 440 aa9.49□□□□□ -0.89
AC004948.1-201ENST00000609858 DNMT1P26358 1616 aaKnown RBP9.49□□□□□ -0.89
AC004948.1-201ENST00000609858 RAPGEF6Q8TEU7 1601 aa9.49□□□□□ -0.89
AC004948.1-201ENST00000609858 CLTCQ00610 1675 aaKnown RBP9.48□□□□□ -0.89
AC004948.1-201ENST00000609858 NPATQ14207 1427 aa9.48□□□□□ -0.89
AC004948.1-201ENST00000609858 GOLGA3Q08378 1498 aa9.48□□□□□ -0.89
AC004948.1-201ENST00000609858 DNAJB2P25686 324 aa9.48□□□□□ -0.89
AC004948.1-201ENST00000609858 RBM46Q8TBY0 533 aaKnown RBP9.48□□□□□ -0.89
AC004948.1-201ENST00000609858 ESF1Q9H501 851 aaKnown RBP9.48□□□□□ -0.89
AC004948.1-201ENST00000609858 AGLP35573 1532 aa9.47□□□□□ -0.89
AC004948.1-201ENST00000609858 NUTM2FA1L443 756 aa9.47□□□□□ -0.89
AC004948.1-201ENST00000609858 BLOC1S3Q6QNY0 202 aa9.47□□□□□ -0.89
AC004948.1-201ENST00000609858 REREQ9P2R6 1566 aa9.46□□□□□ -0.89
AC004948.1-201ENST00000609858 PTGDRQ13258 359 aa9.46□□□□□ -0.9
AC004948.1-201ENST00000609858 TLL1O43897 1013 aa9.45□□□□□ -0.9
AC004948.1-201ENST00000609858 KMT5BQ4FZB7 885 aa9.45□□□□□ -0.9
AC004948.1-201ENST00000609858 TMUB1Q9BVT8 246 aa9.45□□□□□ -0.9
AC004948.1-201ENST00000609858 BARGINQ6ZT62 677 aa9.44□□□□□ -0.9
AC004948.1-201ENST00000609858 KDM5CP41229 1560 aa9.44□□□□□ -0.9
AC004948.1-201ENST00000609858 ROBO1Q9Y6N7 1651 aa9.43□□□□□ -0.9
AC004948.1-201ENST00000609858 SYNMO15061 1565 aa9.43□□□□□ -0.9
AC004948.1-201ENST00000609858 CNTLNQ9NXG0 1405 aa9.43□□□□□ -0.9
AC004948.1-201ENST00000609858 ZMYM3Q14202 1370 aa9.43□□□□□ -0.9
AC004948.1-201ENST00000609858 CFHP08603 1231 aa9.43□□□□□ -0.9
AC004948.1-201ENST00000609858 FECHP22830 423 aa9.43□□□□□ -0.9
AC004948.1-201ENST00000609858 FAM161AQ3B820 660 aa9.43□□□□□ -0.9
AC004948.1-201ENST00000609858 ADGRG1Q9Y653 693 aa9.43□□□□□ -0.9
AC004948.1-201ENST00000609858 TMEM134Q9H6X4 195 aa9.42□□□□□ -0.9
AC004948.1-201ENST00000609858 RCCD1A6NED2 376 aa9.41□□□□□ -0.9
AC004948.1-201ENST00000609858 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
AC004948.1-201ENST00000609858 SLC19A1P41440 591 aa9.41□□□□□ -0.9
AC004948.1-201ENST00000609858 AFAP1Q8N556 730 aa9.41□□□□□ -0.9
AC004948.1-201ENST00000609858 PHLPP1O60346 1717 aa9.41□□□□□ -0.9
AC004948.1-201ENST00000609858 MYO5CQ9NQX4 1742 aa9.41□□□□□ -0.9
AC004948.1-201ENST00000609858 ITSN2Q9NZM3 1697 aa9.41□□□□□ -0.9
AC004948.1-201ENST00000609858 LRP6O75581 1613 aa9.41□□□□□ -0.9
AC004948.1-201ENST00000609858 NUP153P49790 1475 aaKnown RBP9.4□□□□□ -0.9
AC004948.1-201ENST00000609858 IQGAP1P46940 1657 aa9.4□□□□□ -0.9
AC004948.1-201ENST00000609858 FCHSD2O94868 740 aa9.4□□□□□ -0.9
AC004948.1-201ENST00000609858 SLC24A3Q9HC58 644 aa9.4□□□□□ -0.9
AC004948.1-201ENST00000609858 ZNF787Q6DD87 383 aa9.39□□□□□ -0.91
AC004948.1-201ENST00000609858 A2ML1A8K2U0 1454 aa9.39□□□□□ -0.91
AC004948.1-201ENST00000609858 ZNF518AQ6AHZ1 1483 aa9.39□□□□□ -0.91
AC004948.1-201ENST00000609858 KIDINS220Q9ULH0 1771 aa9.38□□□□□ -0.91
AC004948.1-201ENST00000609858 GNPATO15228 680 aa9.38□□□□□ -0.91
AC004948.1-201ENST00000609858 ACTN4O43707 911 aaKnown RBP9.38□□□□□ -0.91
AC004948.1-201ENST00000609858 S1PR4O95977 384 aa9.38□□□□□ -0.91
AC004948.1-201ENST00000609858 HIC1Q14526 733 aa9.38□□□□□ -0.91
AC004948.1-201ENST00000609858 PLCH2O75038 1416 aa9.38□□□□□ -0.91
AC004948.1-201ENST00000609858 LRP5O75197 1615 aa9.38□□□□□ -0.91
AC004948.1-201ENST00000609858 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
AC004948.1-201ENST00000609858 RXRBP28702 533 aa9.37□□□□□ -0.91
AC004948.1-201ENST00000609858 FAM135BQ49AJ0 1406 aa9.37□□□□□ -0.91
AC004948.1-201ENST00000609858 PKDCCQ504Y2 493 aa9.36□□□□□ -0.91
AC004948.1-201ENST00000609858 CDK13Q14004 1512 aaKnown RBP9.36□□□□□ -0.91
AC004948.1-201ENST00000609858 CDK12Q9NYV4 1490 aaPredicted RBP9.35□□□□□ -0.91
AC004948.1-201ENST00000609858 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.35□□□□□ -0.91
AC004948.1-201ENST00000609858 PLEKHD1A6NEE1 506 aa9.35□□□□□ -0.91
AC004948.1-201ENST00000609858 RGS12O14924 1447 aa9.35□□□□□ -0.91
AC004948.1-201ENST00000609858 NPHP4O75161 1426 aaPredicted RBP9.35□□□□□ -0.91
AC004948.1-201ENST00000609858 NR1I2O75469 434 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms