RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 GGNBP2Q9H3C7 697 aa15.75■□□□□ 0.11
CTCFL-221ENST00000608903 NME9Q86XW9 330 aa15.74■□□□□ 0.11
CTCFL-221ENST00000608903 TTC21BQ7Z4L5 1316 aa15.74■□□□□ 0.11
CTCFL-221ENST00000608903 CCER2I3L3R5 266 aa15.73■□□□□ 0.11
CTCFL-221ENST00000608903 DDX17Q92841 729 aaKnown RBP15.73■□□□□ 0.11
CTCFL-221ENST00000608903 KIF20BQ96Q89 1820 aa15.72■□□□□ 0.11
CTCFL-221ENST00000608903 FOXO3O43524 673 aa15.72■□□□□ 0.11
CTCFL-221ENST00000608903 PPP2R1AP30153 589 aa15.71■□□□□ 0.11
CTCFL-221ENST00000608903 MYBBP1AQ9BQG0 1328 aaKnown RBP15.71■□□□□ 0.11
CTCFL-221ENST00000608903 XPCQ01831 940 aaPredicted RBP15.71■□□□□ 0.11
CTCFL-221ENST00000608903 SLAIN2Q9P270 581 aa15.71■□□□□ 0.11
CTCFL-221ENST00000608903 ANKRD26Q9UPS8 1709 aa15.7■□□□□ 0.1
CTCFL-221ENST00000608903 FBLN1P23142 703 aa15.7■□□□□ 0.1
CTCFL-221ENST00000608903 TNNT2P45379 298 aaPredicted RBP15.7■□□□□ 0.1
CTCFL-221ENST00000608903 MORC1Q86VD1 984 aa15.7■□□□□ 0.1
CTCFL-221ENST00000608903 NSD2O96028 1365 aa15.7■□□□□ 0.1
CTCFL-221ENST00000608903 BRINP3Q76B58 766 aa15.69■□□□□ 0.1
CTCFL-221ENST00000608903 GTF3C3Q9Y5Q9 886 aa15.68■□□□□ 0.1
CTCFL-221ENST00000608903 KIF1AQ12756 1690 aa15.68■□□□□ 0.1
CTCFL-221ENST00000608903 PIK3C2AO00443 1686 aa15.67■□□□□ 0.1
CTCFL-221ENST00000608903 PSME1Q06323 249 aa15.67■□□□□ 0.1
CTCFL-221ENST00000608903 TRPM3Q9HCF6 1732 aaPredicted RBP15.66■□□□□ 0.1
CTCFL-221ENST00000608903 MARF1Q9Y4F3 1742 aaKnown RBP15.66■□□□□ 0.1
CTCFL-221ENST00000608903 KRT28Q7Z3Y7 464 aa15.66■□□□□ 0.1
CTCFL-221ENST00000608903 TTC21AQ8NDW8 1320 aa15.66■□□□□ 0.1
CTCFL-221ENST00000608903 OVOS2A0A0J9YW53 1432 aa15.65■□□□□ 0.1
CTCFL-221ENST00000608903 OVOS2Q6IE36 1432 aa15.65■□□□□ 0.1
CTCFL-221ENST00000608903 NLRP13Q86W25 1043 aa15.65■□□□□ 0.1
CTCFL-221ENST00000608903 MRS2Q9HD23 443 aa15.65■□□□□ 0.1
CTCFL-221ENST00000608903 NUTM2GQ5VZR2 741 aa15.65■□□□□ 0.1
CTCFL-221ENST00000608903 PAK3O75914 559 aaPredicted RBP15.64■□□□□ 0.09
CTCFL-221ENST00000608903 BRD4O60885 1362 aaPredicted RBP15.64■□□□□ 0.09
CTCFL-221ENST00000608903 USP31Q70CQ4 1352 aa15.63■□□□□ 0.09
CTCFL-221ENST00000608903 PXDNQ92626 1479 aa15.63■□□□□ 0.09
CTCFL-221ENST00000608903 COG3Q96JB2 828 aa15.62■□□□□ 0.09
CTCFL-221ENST00000608903 ABTB2Q8N961 1025 aa15.62■□□□□ 0.09
CTCFL-221ENST00000608903 MTHFSP49914 203 aa15.61■□□□□ 0.09
CTCFL-221ENST00000608903 PNISRQ8TF01 805 aaKnown RBP15.61■□□□□ 0.09
CTCFL-221ENST00000608903 NLRP6P59044 892 aa15.61■□□□□ 0.09
CTCFL-221ENST00000608903 MAP2P11137 1827 aaKnown RBP15.6■□□□□ 0.09
CTCFL-221ENST00000608903 USP54Q70EL1 1684 aa15.6■□□□□ 0.09
CTCFL-221ENST00000608903 ALS2Q96Q42 1657 aa15.6■□□□□ 0.09
CTCFL-221ENST00000608903 NPHP3Q7Z494 1330 aa15.6■□□□□ 0.09
CTCFL-221ENST00000608903 POLKQ9UBT6 870 aa15.6■□□□□ 0.09
CTCFL-221ENST00000608903 SOS2Q07890 1332 aaPredicted RBP15.59■□□□□ 0.09
CTCFL-221ENST00000608903 ROBO1Q9Y6N7 1651 aa15.59■□□□□ 0.09
CTCFL-221ENST00000608903 NHSL1Q5SYE7 1610 aa15.58■□□□□ 0.09
CTCFL-221ENST00000608903 RRS1Q15050 365 aaKnown RBP15.58■□□□□ 0.08
CTCFL-221ENST00000608903 EMILIN1Q9Y6C2 1016 aa15.58■□□□□ 0.08
CTCFL-221ENST00000608903 SBNO1A3KN83 1393 aa15.58■□□□□ 0.08
CTCFL-221ENST00000608903 AATKQ6ZMQ8 1374 aa15.58■□□□□ 0.08
CTCFL-221ENST00000608903 FAM9BQ8IZU0 186 aa15.58■□□□□ 0.08
CTCFL-221ENST00000608903 SOX12O15370 315 aa15.57■□□□□ 0.08
CTCFL-221ENST00000608903 CERKQ8TCT0 537 aa15.57■□□□□ 0.08
CTCFL-221ENST00000608903 SPATA31A3Q5VYP0 1347 aa15.57■□□□□ 0.08
CTCFL-221ENST00000608903 LMOD2Q6P5Q4 547 aa15.56■□□□□ 0.08
CTCFL-221ENST00000608903 COL3A1P02461 1466 aaPredicted RBP15.55■□□□□ 0.08
CTCFL-221ENST00000608903 PEAK1Q9H792 1746 aa15.55■□□□□ 0.08
CTCFL-221ENST00000608903 MED1Q15648 1581 aaPredicted RBP15.55■□□□□ 0.08
CTCFL-221ENST00000608903 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
CTCFL-221ENST00000608903 TNS3Q68CZ2 1445 aa15.55■□□□□ 0.08
CTCFL-221ENST00000608903 SHPRHQ149N8 1683 aa15.54■□□□□ 0.08
CTCFL-221ENST00000608903 SMG6Q86US8 1419 aaKnown RBP15.54■□□□□ 0.08
CTCFL-221ENST00000608903 PNPLA6Q8IY17 1366 aa15.54■□□□□ 0.08
CTCFL-221ENST00000608903 USP19O94966 1318 aa15.54■□□□□ 0.08
CTCFL-221ENST00000608903 MAP3K19Q56UN5 1328 aa15.53■□□□□ 0.08
CTCFL-221ENST00000608903 SLIT3O75094 1523 aa15.53■□□□□ 0.08
CTCFL-221ENST00000608903 NFAT5O94916 1531 aa15.53■□□□□ 0.08
CTCFL-221ENST00000608903 IQSEC2Q5JU85 1478 aa15.53■□□□□ 0.08
CTCFL-221ENST00000608903 UBAP1LF5GYI3 381 aa15.53■□□□□ 0.08
CTCFL-221ENST00000608903 PIP4K2BP78356 416 aa15.53■□□□□ 0.08
CTCFL-221ENST00000608903 PPM1GO15355 546 aaPredicted RBP15.52■□□□□ 0.08
CTCFL-221ENST00000608903 TOM1O60784 492 aa15.52■□□□□ 0.08
CTCFL-221ENST00000608903 CABLES1Q8TDN4 633 aa15.52■□□□□ 0.08
CTCFL-221ENST00000608903 INSRP06213 1382 aa15.52■□□□□ 0.07
CTCFL-221ENST00000608903 AHDC1Q5TGY3 1603 aaPredicted RBP15.52■□□□□ 0.07
CTCFL-221ENST00000608903 ADAMTS8Q9UP79 889 aa15.52■□□□□ 0.07
CTCFL-221ENST00000608903 CRYBG1Q9Y4K1 1723 aa15.51■□□□□ 0.07
CTCFL-221ENST00000608903 GCP02774 474 aa15.51■□□□□ 0.07
CTCFL-221ENST00000608903 SENP3-EIF4A1A0A087X0R7 540 aa15.49■□□□□ 0.07
CTCFL-221ENST00000608903 CDK12Q9NYV4 1490 aaPredicted RBP15.49■□□□□ 0.07
CTCFL-221ENST00000608903 HSP90AB2PQ58FF8 381 aa15.49■□□□□ 0.07
CTCFL-221ENST00000608903 PHRF1Q9P1Y6 1649 aaKnown RBP15.48■□□□□ 0.07
CTCFL-221ENST00000608903 LTN1O94822 1766 aa15.48■□□□□ 0.07
CTCFL-221ENST00000608903 IL13P35225 146 aa15.47■□□□□ 0.07
CTCFL-221ENST00000608903 CFAP53Q96M91 514 aa15.47■□□□□ 0.07
CTCFL-221ENST00000608903 ARHGEF10O15013 1369 aa15.47■□□□□ 0.07
CTCFL-221ENST00000608903 ARHGEF25Q86VW2 580 aa15.47■□□□□ 0.07
CTCFL-221ENST00000608903 COL16A1Q07092 1604 aaPredicted RBP15.46■□□□□ 0.07
CTCFL-221ENST00000608903 KCNH5Q8NCM2 988 aa15.46■□□□□ 0.07
CTCFL-221ENST00000608903 PHLPP1O60346 1717 aa15.46■□□□□ 0.07
CTCFL-221ENST00000608903 DIAPH1O60610 1272 aaKnown RBP15.46■□□□□ 0.06
CTCFL-221ENST00000608903 HOXC9P31274 260 aa15.46■□□□□ 0.06
CTCFL-221ENST00000608903 ZC3H6P61129 1189 aaKnown RBP15.46■□□□□ 0.06
CTCFL-221ENST00000608903 EIF4A2Q14240 407 aaKnown RBP15.45■□□□□ 0.06
CTCFL-221ENST00000608903 AMPHP49418 695 aa15.44■□□□□ 0.06
CTCFL-221ENST00000608903 WDR43Q15061 677 aaKnown RBP eCLIP15.44■□□□□ 0.06
CTCFL-221ENST00000608903 ABCA3Q99758 1704 aa15.44■□□□□ 0.06
CTCFL-221ENST00000608903 BLMP54132 1417 aaPredicted RBP15.44■□□□□ 0.06
CTCFL-221ENST00000608903 FLT4P35916 1363 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms