RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 SMARCE1Q969G3 411 aa25.21■■□□□ 1.63
SH3D19-211ENST00000604030 JMYQ8N9B5 988 aa25.2■■□□□ 1.63
SH3D19-211ENST00000604030 NCAPD3P42695 1498 aa25.2■■□□□ 1.62
SH3D19-211ENST00000604030 CCDC192P0DO97 292 aa25.2■■□□□ 1.62
SH3D19-211ENST00000604030 FILIP1LQ4L180 1135 aa25.2■■□□□ 1.62
SH3D19-211ENST00000604030 SURF6O75683 361 aaKnown RBP25.2■■□□□ 1.62
SH3D19-211ENST00000604030 RAD54L2Q9Y4B4 1467 aa25.19■■□□□ 1.62
SH3D19-211ENST00000604030 AKNAQ7Z591 1439 aa25.19■■□□□ 1.62
SH3D19-211ENST00000604030 DCTN1Q14203 1278 aa25.19■■□□□ 1.62
SH3D19-211ENST00000604030 MYO6Q9UM54 1294 aa25.19■■□□□ 1.62
SH3D19-211ENST00000604030 MVPQ14764 893 aaKnown RBP25.19■■□□□ 1.62
SH3D19-211ENST00000604030 GRPEL1Q9HAV7 217 aa25.18■■□□□ 1.62
SH3D19-211ENST00000604030 WASHC4Q2M389 1173 aa25.17■■□□□ 1.62
SH3D19-211ENST00000604030 ATF7IPQ6VMQ6 1270 aa25.17■■□□□ 1.62
SH3D19-211ENST00000604030 CABP2Q9NPB3 220 aa25.17■■□□□ 1.62
SH3D19-211ENST00000604030 PRKAR2BP31323 418 aa25.16■■□□□ 1.62
SH3D19-211ENST00000604030 NEUROD6Q96NK8 337 aa25.16■■□□□ 1.62
SH3D19-211ENST00000604030 SYNJ2O15056 1496 aa25.16■■□□□ 1.62
SH3D19-211ENST00000604030 BRPF3Q9ULD4 1205 aa25.16■■□□□ 1.62
SH3D19-211ENST00000604030 PRDM2Q13029 1718 aa25.16■■□□□ 1.62
SH3D19-211ENST00000604030 TBC1D2BQ9UPU7 963 aa25.15■■□□□ 1.62
SH3D19-211ENST00000604030 ARHGAP5Q13017 1502 aa25.15■■□□□ 1.62
SH3D19-211ENST00000604030 CYP46A1Q9Y6A2 500 aa25.14■■□□□ 1.62
SH3D19-211ENST00000604030 CFTRP13569 1480 aa25.14■■□□□ 1.61
SH3D19-211ENST00000604030 ERBINQ96RT1 1412 aa25.14■■□□□ 1.61
SH3D19-211ENST00000604030 NOB1Q9ULX3 412 aaKnown RBP25.14■■□□□ 1.61
SH3D19-211ENST00000604030 DACH1Q9UI36 760 aa25.13■■□□□ 1.61
SH3D19-211ENST00000604030 PRXQ9BXM0 1461 aa25.13■■□□□ 1.61
SH3D19-211ENST00000604030 MCM4P33991 863 aa25.13■■□□□ 1.61
SH3D19-211ENST00000604030 NAP1L1P55209 391 aaKnown RBP25.13■■□□□ 1.61
SH3D19-211ENST00000604030 PDILTQ8N807 584 aa25.13■■□□□ 1.61
SH3D19-211ENST00000604030 ZSCAN31Q96LW9 406 aaPredicted RBP25.13■■□□□ 1.61
SH3D19-211ENST00000604030 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
SH3D19-211ENST00000604030 KRT85P78386 507 aa25.12■■□□□ 1.61
SH3D19-211ENST00000604030 PRM3Q9NNZ6 103 aa25.12■■□□□ 1.61
SH3D19-211ENST00000604030 TIAM1Q13009 1591 aa25.12■■□□□ 1.61
SH3D19-211ENST00000604030 C9orf84Q5VXU9 1444 aa25.12■■□□□ 1.61
SH3D19-211ENST00000604030 CTDP1Q9Y5B0 961 aaPredicted RBP25.11■■□□□ 1.61
SH3D19-211ENST00000604030 OFD1O75665 1012 aa25.11■■□□□ 1.61
SH3D19-211ENST00000604030 CFAP70Q5T0N1 1121 aa25.11■■□□□ 1.61
SH3D19-211ENST00000604030 CAGE1Q8TC20 777 aa25.11■■□□□ 1.61
SH3D19-211ENST00000604030 LRRCC1Q9C099 1032 aa25.11■■□□□ 1.61
SH3D19-211ENST00000604030 SMC2O95347 1197 aa25.11■■□□□ 1.61
SH3D19-211ENST00000604030 CHD1LQ86WJ1 897 aa25.1■■□□□ 1.61
SH3D19-211ENST00000604030 TXLNAP40222 546 aa25.1■■□□□ 1.61
SH3D19-211ENST00000604030 STK38Q15208 465 aa25.1■■□□□ 1.61
SH3D19-211ENST00000604030 PLEKHO1Q53GL0 409 aaPredicted RBP25.1■■□□□ 1.61
SH3D19-211ENST00000604030 RRP12Q5JTH9 1297 aaKnown RBP25.09■■□□□ 1.61
SH3D19-211ENST00000604030 FIBPO43427 364 aa25.09■■□□□ 1.61
SH3D19-211ENST00000604030 TXLNBQ8N3L3 684 aa25.09■■□□□ 1.61
SH3D19-211ENST00000604030 ZNF692Q9BU19 519 aaPredicted RBP25.09■■□□□ 1.61
SH3D19-211ENST00000604030 RDXP35241 583 aaKnown RBP25.09■■□□□ 1.61
SH3D19-211ENST00000604030 BCAR3O75815 825 aa25.08■■□□□ 1.61
SH3D19-211ENST00000604030 FBXW7Q969H0 707 aa25.08■■□□□ 1.61
SH3D19-211ENST00000604030 CCDC27Q2M243 656 aa25.08■■□□□ 1.61
SH3D19-211ENST00000604030 NBPF8Q3BBV2 869 aa25.08■■□□□ 1.61
SH3D19-211ENST00000604030 RPAP2Q8IXW5 612 aaPredicted RBP25.08■■□□□ 1.61
SH3D19-211ENST00000604030 CCDC43Q96MW1 224 aaKnown RBP25.08■■□□□ 1.61
SH3D19-211ENST00000604030 CBFA2T2O43439 604 aa25.07■■□□□ 1.6
SH3D19-211ENST00000604030 RRP9O43818 475 aaKnown RBP25.07■■□□□ 1.6
SH3D19-211ENST00000604030 RPGRIP1LQ68CZ1 1315 aa25.07■■□□□ 1.6
SH3D19-211ENST00000604030 CCDC112Q8NEF3 446 aa25.07■■□□□ 1.6
SH3D19-211ENST00000604030 EPS15P42566 896 aa25.07■■□□□ 1.6
SH3D19-211ENST00000604030 HECW1Q76N89 1606 aa25.06■■□□□ 1.6
SH3D19-211ENST00000604030 ESPNB1AK53 854 aa25.06■■□□□ 1.6
SH3D19-211ENST00000604030 LEKR1Q6ZMV7 388 aa25.06■■□□□ 1.6
SH3D19-211ENST00000604030 TNMDQ9H2S6 317 aa25.06■■□□□ 1.6
SH3D19-211ENST00000604030 MAGEC2Q9UBF1 373 aaPredicted RBP25.06■■□□□ 1.6
SH3D19-211ENST00000604030 FOSBP53539 338 aa25.05■■□□□ 1.6
SH3D19-211ENST00000604030 TROQ12816 1431 aaPredicted RBP25.05■■□□□ 1.6
SH3D19-211ENST00000604030 CT47A1Q5JQC4 288 aaPredicted RBP25.05■■□□□ 1.6
SH3D19-211ENST00000604030 NLRP6P59044 892 aa25.05■■□□□ 1.6
SH3D19-211ENST00000604030 PDCL2Q8N4E4 241 aa25.04■■□□□ 1.6
SH3D19-211ENST00000604030 LUC7LQ9NQ29 371 aaKnown RBP25.04■■□□□ 1.6
SH3D19-211ENST00000604030 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.04■■□□□ 1.6
SH3D19-211ENST00000604030 SLC3A2P08195 630 aaKnown RBP25.04■■□□□ 1.6
SH3D19-211ENST00000604030 CCDC191Q8NCU4 936 aa25.04■■□□□ 1.6
SH3D19-211ENST00000604030 ANO8Q9HCE9 1232 aaPredicted RBP25.04■■□□□ 1.6
SH3D19-211ENST00000604030 ANKRD30BQ9BXX2 1392 aa25.03■■□□□ 1.6
SH3D19-211ENST00000604030 TMEM132EQ6IEE7 984 aa25.03■■□□□ 1.6
SH3D19-211ENST00000604030 ATAD2Q6PL18 1390 aa25.03■■□□□ 1.6
SH3D19-211ENST00000604030 GPRASP1Q5JY77 1395 aa25.03■■□□□ 1.6
SH3D19-211ENST00000604030 PPP6R1Q9UPN7 881 aa25.03■■□□□ 1.6
SH3D19-211ENST00000604030 ERLIN1O75477 346 aa25.03■■□□□ 1.6
SH3D19-211ENST00000604030 SLFN5Q08AF3 891 aa25.03■■□□□ 1.6
SH3D19-211ENST00000604030 AIMP1Q12904 312 aaKnown RBP25.03■■□□□ 1.6
SH3D19-211ENST00000604030 KRT32Q14532 448 aa25.03■■□□□ 1.6
SH3D19-211ENST00000604030 POLA1P09884 1462 aaPredicted RBP25.02■■□□□ 1.6
SH3D19-211ENST00000604030 ZNHIT6Q9NWK9 470 aaKnown RBP25.02■■□□□ 1.6
SH3D19-211ENST00000604030 H0YHG0 523 aa25.02■■□□□ 1.6
SH3D19-211ENST00000604030 CFAP45Q9UL16 551 aa25.02■■□□□ 1.6
SH3D19-211ENST00000604030 NBPF1Q3BBV0 1214 aa25.02■■□□□ 1.6
SH3D19-211ENST00000604030 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.02■■□□□ 1.6
SH3D19-211ENST00000604030 FCHSD2O94868 740 aa25■■□□□ 1.59
SH3D19-211ENST00000604030 SLC4A2P04920 1241 aa25■■□□□ 1.59
SH3D19-211ENST00000604030 KIF2AO00139 706 aaPredicted RBP25■■□□□ 1.59
SH3D19-211ENST00000604030 EIF3JO75822 258 aaKnown RBP25■■□□□ 1.59
SH3D19-211ENST00000604030 ZSCAN30Q86W11 494 aa25■■□□□ 1.59
SH3D19-211ENST00000604030 DAPK1P53355 1430 aa25■■□□□ 1.59
SH3D19-211ENST00000604030 SUPT6HQ7KZ85 1726 aaKnown RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms