RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 CABP1Q9NZU7 370 aa34.25■■■■□ 3.07
UBE2E3-213ENST00000602959 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.24■■■■□ 3.07
UBE2E3-213ENST00000602959 BRD4O60885 1362 aaPredicted RBP34.23■■■■□ 3.07
UBE2E3-213ENST00000602959 AKAP12Q02952 1782 aa34.22■■■■□ 3.07
UBE2E3-213ENST00000602959 HAP1P54257 671 aaPredicted RBP34.22■■■■□ 3.07
UBE2E3-213ENST00000602959 SLIT2O94813 1529 aa34.21■■■■□ 3.07
UBE2E3-213ENST00000602959 USP21Q9UK80 565 aa34.21■■■■□ 3.07
UBE2E3-213ENST00000602959 USP6P35125 1406 aa34.21■■■■□ 3.07
UBE2E3-213ENST00000602959 PHRF1Q9P1Y6 1649 aaKnown RBP34.2■■■■□ 3.07
UBE2E3-213ENST00000602959 USP47Q96K76 1375 aa34.2■■■■□ 3.07
UBE2E3-213ENST00000602959 BCL9LQ86UU0 1499 aa34.2■■■■□ 3.06
UBE2E3-213ENST00000602959 PLCH1Q4KWH8 1693 aa34.19■■■■□ 3.06
UBE2E3-213ENST00000602959 ST20-MTHFSA0A0A6YYL1 179 aa34.19■■■■□ 3.06
UBE2E3-213ENST00000602959 TESK2Q96S53 571 aa34.19■■■■□ 3.06
UBE2E3-213ENST00000602959 CDK12Q9NYV4 1490 aaPredicted RBP34.19■■■■□ 3.06
UBE2E3-213ENST00000602959 NWD2Q9ULI1 1742 aa34.18■■■■□ 3.06
UBE2E3-213ENST00000602959 QTRT2Q9H974 415 aaKnown RBP34.18■■■■□ 3.06
UBE2E3-213ENST00000602959 ATRNO75882 1429 aa34.17■■■■□ 3.06
UBE2E3-213ENST00000602959 PLEKHG5O94827 1062 aa34.17■■■■□ 3.06
UBE2E3-213ENST00000602959 RXRBP28702 533 aa34.17■■■■□ 3.06
UBE2E3-213ENST00000602959 SSH2Q76I76 1423 aa34.15■■■■□ 3.06
UBE2E3-213ENST00000602959 PUS7Q96PZ0 661 aaKnown RBP34.14■■■■□ 3.06
UBE2E3-213ENST00000602959 TRPC5Q9UL62 973 aaPredicted RBP34.14■■■■□ 3.06
UBE2E3-213ENST00000602959 CPSF1Q10570 1443 aaKnown RBP34.13■■■■□ 3.05
UBE2E3-213ENST00000602959 SLC24A1O60721 1099 aa34.13■■■■□ 3.05
UBE2E3-213ENST00000602959 RBM6P78332 1123 aaKnown RBP34.13■■■■□ 3.05
UBE2E3-213ENST00000602959 NRKQ7Z2Y5 1582 aa34.13■■■■□ 3.05
UBE2E3-213ENST00000602959 MON2Q7Z3U7 1717 aa34.13■■■■□ 3.05
UBE2E3-213ENST00000602959 COL14A1Q05707 1796 aaKnown RBP34.12■■■■□ 3.05
UBE2E3-213ENST00000602959 ABTB2Q8N961 1025 aa34.1■■■■□ 3.05
UBE2E3-213ENST00000602959 ZNF692Q9BU19 519 aaPredicted RBP34.1■■■■□ 3.05
UBE2E3-213ENST00000602959 PIK3C2AO00443 1686 aa34.09■■■■□ 3.05
UBE2E3-213ENST00000602959 NUTM2GQ5VZR2 741 aa34.08■■■■□ 3.05
UBE2E3-213ENST00000602959 UNC5CLQ8IV45 518 aa34.08■■■■□ 3.05
UBE2E3-213ENST00000602959 NRAPQ86VF7 1730 aa34.07■■■■□ 3.05
UBE2E3-213ENST00000602959 USP19O94966 1318 aa34.07■■■■□ 3.05
UBE2E3-213ENST00000602959 CD163L1Q9NR16 1453 aa34.07■■■■□ 3.04
UBE2E3-213ENST00000602959 FAM83GA6ND36 823 aa34.06■■■■□ 3.04
UBE2E3-213ENST00000602959 RGS12O14924 1447 aa34.05■■■■□ 3.04
UBE2E3-213ENST00000602959 KTN1Q86UP2 1357 aaKnown RBP34.04■■■■□ 3.04
UBE2E3-213ENST00000602959 NLRP13Q86W25 1043 aa34.03■■■■□ 3.04
UBE2E3-213ENST00000602959 NINLQ9Y2I6 1382 aa34.02■■■■□ 3.04
UBE2E3-213ENST00000602959 TTC21BQ7Z4L5 1316 aa34.01■■■■□ 3.03
UBE2E3-213ENST00000602959 KIAA0232Q92628 1395 aa34■■■■□ 3.03
UBE2E3-213ENST00000602959 SLIT3O75094 1523 aa34■■■■□ 3.03
UBE2E3-213ENST00000602959 GLI3P10071 1580 aa34■■■■□ 3.03
UBE2E3-213ENST00000602959 TTC21AQ8NDW8 1320 aa34■■■■□ 3.03
UBE2E3-213ENST00000602959 TMC1Q8TDI8 760 aa33.99■■■■□ 3.03
UBE2E3-213ENST00000602959 PRDM11Q9NQV5 511 aa33.99■■■■□ 3.03
UBE2E3-213ENST00000602959 TMF1P82094 1093 aa33.98■■■■□ 3.03
UBE2E3-213ENST00000602959 GJD4Q96KN9 370 aaPredicted RBP33.98■■■■□ 3.03
UBE2E3-213ENST00000602959 SLC12A5Q9H2X9 1139 aa33.98■■■■□ 3.03
UBE2E3-213ENST00000602959 CPDO75976 1380 aa33.97■■■■□ 3.03
UBE2E3-213ENST00000602959 NLRP6P59044 892 aa33.96■■■■□ 3.03
UBE2E3-213ENST00000602959 VPS72Q15906 364 aa33.96■■■■□ 3.03
UBE2E3-213ENST00000602959 USP54Q70EL1 1684 aa33.96■■■■□ 3.03
UBE2E3-213ENST00000602959 BTG4Q9NY30 223 aa33.95■■■■□ 3.03
UBE2E3-213ENST00000602959 A0A1W2PP64 1363 aa33.95■■■■□ 3.02
UBE2E3-213ENST00000602959 HDGFL2Q7Z4V5 671 aaPredicted RBP33.94■■■■□ 3.02
UBE2E3-213ENST00000602959 TERF2IPQ9NYB0 399 aa33.94■■■■□ 3.02
UBE2E3-213ENST00000602959 GCP02774 474 aa33.93■■■■□ 3.02
UBE2E3-213ENST00000602959 ZC3H6P61129 1189 aaKnown RBP33.93■■■■□ 3.02
UBE2E3-213ENST00000602959 LMO7Q8WWI1 1683 aa33.93■■■■□ 3.02
UBE2E3-213ENST00000602959 EDC4Q6P2E9 1401 aaKnown RBP33.92■■■■□ 3.02
UBE2E3-213ENST00000602959 CHRNA2Q15822 529 aa33.89■■■■□ 3.02
UBE2E3-213ENST00000602959 CDCA8Q53HL2 280 aa33.89■■■■□ 3.02
UBE2E3-213ENST00000602959 USP31Q70CQ4 1352 aa33.86■■■■□ 3.01
UBE2E3-213ENST00000602959 MYOM1P52179 1685 aa33.86■■■■□ 3.01
UBE2E3-213ENST00000602959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.85■■■■□ 3.01
UBE2E3-213ENST00000602959 ANKRD36BQ8N2N9 1353 aa33.85■■■■□ 3.01
UBE2E3-213ENST00000602959 CAMTA1Q9Y6Y1 1673 aa33.84■■■■□ 3.01
UBE2E3-213ENST00000602959 EIF4G2P78344 907 aaKnown RBP eCLIP33.84■■■■□ 3.01
UBE2E3-213ENST00000602959 NFAT5O94916 1531 aa33.84■■■■□ 3.01
UBE2E3-213ENST00000602959 CCDC9Q9Y3X0 531 aaKnown RBP33.83■■■■□ 3.01
UBE2E3-213ENST00000602959 COL18A1P39060 1754 aa33.81■■■■□ 3
UBE2E3-213ENST00000602959 NME9Q86XW9 330 aa33.8■■■■□ 3
UBE2E3-213ENST00000602959 KCNH5Q8NCM2 988 aa33.8■■■■□ 3
UBE2E3-213ENST00000602959 SPATA31A5Q5VU36 1347 aa33.79■■■■□ 3
UBE2E3-213ENST00000602959 SPATA31A7Q8IWB4 1347 aa33.79■■■■□ 3
UBE2E3-213ENST00000602959 AATKQ6ZMQ8 1374 aa33.79■■■■□ 3
UBE2E3-213ENST00000602959 BRWD3Q6RI45 1802 aa33.79■■■■□ 3
UBE2E3-213ENST00000602959 ONECUT3O60422 494 aaPredicted RBP33.78■■■■□ 3
UBE2E3-213ENST00000602959 HSPA5P11021 654 aaKnown RBP33.78■■■■□ 3
UBE2E3-213ENST00000602959 OVOS2A0A0J9YW53 1432 aa33.77■■■■□ 3
UBE2E3-213ENST00000602959 OVOS2Q6IE36 1432 aa33.77■■■■□ 3
UBE2E3-213ENST00000602959 ZRANB1Q9UGI0 708 aa33.76■■■□□ 2.99
UBE2E3-213ENST00000602959 COL5A2P05997 1499 aaPredicted RBP33.76■■■□□ 2.99
UBE2E3-213ENST00000602959 ABCC6O95255 1503 aa33.74■■■□□ 2.99
UBE2E3-213ENST00000602959 STRN4Q9NRL3 753 aa33.74■■■□□ 2.99
UBE2E3-213ENST00000602959 ARHGEF25Q86VW2 580 aa33.73■■■□□ 2.99
UBE2E3-213ENST00000602959 UPF1Q92900 1129 aaKnown RBP eCLIP33.73■■■□□ 2.99
UBE2E3-213ENST00000602959 THSD7AQ9UPZ6 1657 aa33.73■■■□□ 2.99
UBE2E3-213ENST00000602959 SPATA31A1Q5TZJ5 1347 aa33.73■■■□□ 2.99
UBE2E3-213ENST00000602959 SEPT12Q8IYM1 358 aa33.72■■■□□ 2.99
UBE2E3-213ENST00000602959 EP400Q96L91 3159 aa33.7■■■□□ 2.99
UBE2E3-213ENST00000602959 LTN1O94822 1766 aa33.7■■■□□ 2.99
UBE2E3-213ENST00000602959 SOX12O15370 315 aa33.7■■■□□ 2.99
UBE2E3-213ENST00000602959 EVA1CP58658 441 aa33.7■■■□□ 2.99
UBE2E3-213ENST00000602959 ZBTB7CA1YPR0 619 aa33.69■■■□□ 2.98
UBE2E3-213ENST00000602959 FAM98CQ17RN3 349 aaKnown RBP33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms