RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 BRINP3Q76B58 766 aa30.01■■■□□ 2.39
SNRNP70-209ENST00000601065 PSME1Q06323 249 aa30■■■□□ 2.39
SNRNP70-209ENST00000601065 BRD4O60885 1362 aaPredicted RBP29.99■■■□□ 2.39
SNRNP70-209ENST00000601065 ANKRD26Q9UPS8 1709 aa29.99■■■□□ 2.39
SNRNP70-209ENST00000601065 GGNBP2Q9H3C7 697 aa29.98■■■□□ 2.39
SNRNP70-209ENST00000601065 TTC21AQ8NDW8 1320 aa29.98■■■□□ 2.39
SNRNP70-209ENST00000601065 NME9Q86XW9 330 aa29.97■■■□□ 2.39
SNRNP70-209ENST00000601065 IQSEC2Q5JU85 1478 aa29.97■■■□□ 2.39
SNRNP70-209ENST00000601065 NPHP3Q7Z494 1330 aa29.94■■■□□ 2.38
SNRNP70-209ENST00000601065 MORC1Q86VD1 984 aa29.94■■■□□ 2.38
SNRNP70-209ENST00000601065 XPCQ01831 940 aaPredicted RBP29.93■■■□□ 2.38
SNRNP70-209ENST00000601065 MYBBP1AQ9BQG0 1328 aaKnown RBP29.93■■■□□ 2.38
SNRNP70-209ENST00000601065 TRPM3Q9HCF6 1732 aaPredicted RBP29.93■■■□□ 2.38
SNRNP70-209ENST00000601065 PIK3C2AO00443 1686 aa29.92■■■□□ 2.38
SNRNP70-209ENST00000601065 KRT28Q7Z3Y7 464 aa29.92■■■□□ 2.38
SNRNP70-209ENST00000601065 DDX17Q92841 729 aaKnown RBP29.92■■■□□ 2.38
SNRNP70-209ENST00000601065 CCER2I3L3R5 266 aa29.91■■■□□ 2.38
SNRNP70-209ENST00000601065 PAK3O75914 559 aaPredicted RBP29.91■■■□□ 2.38
SNRNP70-209ENST00000601065 ZRANB1Q9UGI0 708 aa29.9■■■□□ 2.38
SNRNP70-209ENST00000601065 CERKQ8TCT0 537 aa29.9■■■□□ 2.38
SNRNP70-209ENST00000601065 PXDNQ92626 1479 aa29.89■■■□□ 2.38
SNRNP70-209ENST00000601065 ROBO1Q9Y6N7 1651 aa29.89■■■□□ 2.37
SNRNP70-209ENST00000601065 TOM1O60784 492 aa29.88■■■□□ 2.37
SNRNP70-209ENST00000601065 COG3Q96JB2 828 aa29.88■■■□□ 2.37
SNRNP70-209ENST00000601065 OVOS2A0A0J9YW53 1432 aa29.88■■■□□ 2.37
SNRNP70-209ENST00000601065 OVOS2Q6IE36 1432 aa29.88■■■□□ 2.37
SNRNP70-209ENST00000601065 NHSL1Q5SYE7 1610 aa29.87■■■□□ 2.37
SNRNP70-209ENST00000601065 PPP2R1AP30153 589 aa29.87■■■□□ 2.37
SNRNP70-209ENST00000601065 ABTB2Q8N961 1025 aa29.87■■■□□ 2.37
SNRNP70-209ENST00000601065 USP31Q70CQ4 1352 aa29.87■■■□□ 2.37
SNRNP70-209ENST00000601065 TNNT2P45379 298 aaPredicted RBP29.85■■■□□ 2.37
SNRNP70-209ENST00000601065 USP54Q70EL1 1684 aa29.85■■■□□ 2.37
SNRNP70-209ENST00000601065 SBNO1A3KN83 1393 aa29.84■■■□□ 2.37
SNRNP70-209ENST00000601065 NLRP13Q86W25 1043 aa29.84■■■□□ 2.37
SNRNP70-209ENST00000601065 ALS2Q96Q42 1657 aa29.83■■■□□ 2.37
SNRNP70-209ENST00000601065 SOS2Q07890 1332 aaPredicted RBP29.83■■■□□ 2.37
SNRNP70-209ENST00000601065 MARF1Q9Y4F3 1742 aaKnown RBP29.82■■■□□ 2.36
SNRNP70-209ENST00000601065 SCAF1Q9H7N4 1312 aaKnown RBP29.82■■■□□ 2.36
SNRNP70-209ENST00000601065 NLRP6P59044 892 aa29.82■■■□□ 2.36
SNRNP70-209ENST00000601065 CCDC184Q52MB2 194 aa29.82■■■□□ 2.36
SNRNP70-209ENST00000601065 UBAP1LF5GYI3 381 aa29.81■■■□□ 2.36
SNRNP70-209ENST00000601065 NUTM2GQ5VZR2 741 aa29.8■■■□□ 2.36
SNRNP70-209ENST00000601065 TNS3Q68CZ2 1445 aa29.79■■■□□ 2.36
SNRNP70-209ENST00000601065 AHDC1Q5TGY3 1603 aaPredicted RBP29.77■■■□□ 2.36
SNRNP70-209ENST00000601065 SPATA31A3Q5VYP0 1347 aa29.77■■■□□ 2.36
SNRNP70-209ENST00000601065 MRS2Q9HD23 443 aa29.77■■■□□ 2.36
SNRNP70-209ENST00000601065 AATKQ6ZMQ8 1374 aa29.76■■■□□ 2.35
SNRNP70-209ENST00000601065 LMOD2Q6P5Q4 547 aa29.76■■■□□ 2.35
SNRNP70-209ENST00000601065 PIP4K2BP78356 416 aa29.75■■■□□ 2.35
SNRNP70-209ENST00000601065 FBLN1P23142 703 aa29.75■■■□□ 2.35
SNRNP70-209ENST00000601065 MAP2P11137 1827 aaKnown RBP29.73■■■□□ 2.35
SNRNP70-209ENST00000601065 ARHGEF10O15013 1369 aa29.72■■■□□ 2.35
SNRNP70-209ENST00000601065 MTHFSP49914 203 aa29.72■■■□□ 2.35
SNRNP70-209ENST00000601065 POLKQ9UBT6 870 aa29.7■■■□□ 2.35
SNRNP70-209ENST00000601065 USP19O94966 1318 aa29.7■■■□□ 2.35
SNRNP70-209ENST00000601065 SLIT3O75094 1523 aa29.69■■■□□ 2.34
SNRNP70-209ENST00000601065 SOX12O15370 315 aa29.68■■■□□ 2.34
SNRNP70-209ENST00000601065 YTHDC1Q96MU7 727 aaKnown RBP29.68■■■□□ 2.34
SNRNP70-209ENST00000601065 SMG6Q86US8 1419 aaKnown RBP29.68■■■□□ 2.34
SNRNP70-209ENST00000601065 RRS1Q15050 365 aaKnown RBP29.67■■■□□ 2.34
SNRNP70-209ENST00000601065 PHLPP1O60346 1717 aa29.67■■■□□ 2.34
SNRNP70-209ENST00000601065 MED1Q15648 1581 aaPredicted RBP29.67■■■□□ 2.34
SNRNP70-209ENST00000601065 EMILIN1Q9Y6C2 1016 aa29.66■■■□□ 2.34
SNRNP70-209ENST00000601065 NFAT5O94916 1531 aa29.66■■■□□ 2.34
SNRNP70-209ENST00000601065 KCNH5Q8NCM2 988 aa29.65■■■□□ 2.34
SNRNP70-209ENST00000601065 COL16A1Q07092 1604 aaPredicted RBP29.64■■■□□ 2.34
SNRNP70-209ENST00000601065 LRRC59Q96AG4 307 aaKnown RBP29.64■■■□□ 2.34
SNRNP70-209ENST00000601065 CRYBG1Q9Y4K1 1723 aa29.64■■■□□ 2.33
SNRNP70-209ENST00000601065 GCP02774 474 aa29.63■■■□□ 2.33
SNRNP70-209ENST00000601065 PHRF1Q9P1Y6 1649 aaKnown RBP29.62■■■□□ 2.33
SNRNP70-209ENST00000601065 PNPLA6Q8IY17 1366 aa29.62■■■□□ 2.33
SNRNP70-209ENST00000601065 PPM1GO15355 546 aaPredicted RBP29.62■■■□□ 2.33
SNRNP70-209ENST00000601065 PNISRQ8TF01 805 aaKnown RBP29.62■■■□□ 2.33
SNRNP70-209ENST00000601065 PLEKHG5O94827 1062 aa29.61■■■□□ 2.33
SNRNP70-209ENST00000601065 CFAP53Q96M91 514 aa29.61■■■□□ 2.33
SNRNP70-209ENST00000601065 CDK12Q9NYV4 1490 aaPredicted RBP29.61■■■□□ 2.33
SNRNP70-209ENST00000601065 MAP3K19Q56UN5 1328 aa29.6■■■□□ 2.33
SNRNP70-209ENST00000601065 PEAK1Q9H792 1746 aa29.59■■■□□ 2.33
SNRNP70-209ENST00000601065 INSRP06213 1382 aa29.59■■■□□ 2.33
SNRNP70-209ENST00000601065 COL3A1P02461 1466 aaPredicted RBP29.59■■■□□ 2.33
SNRNP70-209ENST00000601065 LTN1O94822 1766 aa29.58■■■□□ 2.33
SNRNP70-209ENST00000601065 CABLES1Q8TDN4 633 aa29.58■■■□□ 2.33
SNRNP70-209ENST00000601065 FAM9BQ8IZU0 186 aa29.56■■■□□ 2.32
SNRNP70-209ENST00000601065 KIF24Q5T7B8 1368 aa29.55■■■□□ 2.32
SNRNP70-209ENST00000601065 SHPRHQ149N8 1683 aa29.55■■■□□ 2.32
SNRNP70-209ENST00000601065 ABCA3Q99758 1704 aa29.55■■■□□ 2.32
SNRNP70-209ENST00000601065 FLT4P35916 1363 aa29.54■■■□□ 2.32
SNRNP70-209ENST00000601065 COL22A1Q8NFW1 1626 aaPredicted RBP29.54■■■□□ 2.32
SNRNP70-209ENST00000601065 ARHGEF25Q86VW2 580 aa29.53■■■□□ 2.32
SNRNP70-209ENST00000601065 AMPHP49418 695 aa29.52■■■□□ 2.32
SNRNP70-209ENST00000601065 RTL1A6NKG5 1358 aa29.51■■■□□ 2.32
SNRNP70-209ENST00000601065 DIAPH1O60610 1272 aaKnown RBP29.5■■■□□ 2.31
SNRNP70-209ENST00000601065 HOXC9P31274 260 aa29.49■■■□□ 2.31
SNRNP70-209ENST00000601065 ZC3H6P61129 1189 aaKnown RBP29.49■■■□□ 2.31
SNRNP70-209ENST00000601065 HSP90AB2PQ58FF8 381 aa29.49■■■□□ 2.31
SNRNP70-209ENST00000601065 WDR43Q15061 677 aaKnown RBP eCLIP29.49■■■□□ 2.315e-7■■■□□ 16.9
SNRNP70-209ENST00000601065 CPDO75976 1380 aa29.47■■■□□ 2.31
SNRNP70-209ENST00000601065 IP6K1Q92551 441 aa29.47■■■□□ 2.31
SNRNP70-209ENST00000601065 ZBTB7CA1YPR0 619 aa29.46■■■□□ 2.31
SNRNP70-209ENST00000601065 HAP1P54257 671 aaPredicted RBP29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms