RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 ORAI2Q96SN7 254 aa17.24■□□□□ 0.35
ZNF548-210ENST00000600442 MRS2Q9HD23 443 aa17.24■□□□□ 0.35
ZNF548-210ENST00000600442 CCDC61Q9Y6R9 512 aa17.24■□□□□ 0.35
ZNF548-210ENST00000600442 PLEKHH1Q9ULM0 1364 aa17.24■□□□□ 0.35
ZNF548-210ENST00000600442 CC2D1BQ5T0F9 858 aaKnown RBP17.23■□□□□ 0.35
ZNF548-210ENST00000600442 SOS2Q07890 1332 aaPredicted RBP17.22■□□□□ 0.35
ZNF548-210ENST00000600442 NLRP13Q86W25 1043 aa17.22■□□□□ 0.35
ZNF548-210ENST00000600442 USP21Q9UK80 565 aa17.22■□□□□ 0.35
ZNF548-210ENST00000600442 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.35
ZNF548-210ENST00000600442 YTHDC1Q96MU7 727 aaKnown RBP17.21■□□□□ 0.35
ZNF548-210ENST00000600442 NSD2O96028 1365 aa17.2■□□□□ 0.34
ZNF548-210ENST00000600442 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
ZNF548-210ENST00000600442 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
ZNF548-210ENST00000600442 ZNF692Q9BU19 519 aaPredicted RBP17.2■□□□□ 0.34
ZNF548-210ENST00000600442 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
ZNF548-210ENST00000600442 FNBP4Q8N3X1 1017 aaPredicted RBP17.19■□□□□ 0.34
ZNF548-210ENST00000600442 CABP1Q9NZU7 370 aa17.19■□□□□ 0.34
ZNF548-210ENST00000600442 TRPC5Q9UL62 973 aaPredicted RBP17.19■□□□□ 0.34
ZNF548-210ENST00000600442 NSD3Q9BZ95 1437 aa17.18■□□□□ 0.34
ZNF548-210ENST00000600442 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
ZNF548-210ENST00000600442 ATP7BP35670 1465 aa17.17■□□□□ 0.34
ZNF548-210ENST00000600442 ADGRB2O60241 1585 aa17.16■□□□□ 0.34
ZNF548-210ENST00000600442 CARD14Q9BXL6 1004 aa17.16■□□□□ 0.34
ZNF548-210ENST00000600442 COL22A1Q8NFW1 1626 aaPredicted RBP17.16■□□□□ 0.34
ZNF548-210ENST00000600442 PPIP5K1Q6PFW1 1433 aa17.15■□□□□ 0.34
ZNF548-210ENST00000600442 EP400Q96L91 3159 aa17.15■□□□□ 0.34
ZNF548-210ENST00000600442 MYOM1P52179 1685 aa17.15■□□□□ 0.34
ZNF548-210ENST00000600442 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.33
ZNF548-210ENST00000600442 ATRNO75882 1429 aa17.13■□□□□ 0.33
ZNF548-210ENST00000600442 ANKARQ7Z5J8 1434 aa17.13■□□□□ 0.33
ZNF548-210ENST00000600442 ESCO1Q5FWF5 840 aa17.13■□□□□ 0.33
ZNF548-210ENST00000600442 A0A1W2PP64 1363 aa17.13■□□□□ 0.33
ZNF548-210ENST00000600442 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
ZNF548-210ENST00000600442 NPHP3Q7Z494 1330 aa17.11■□□□□ 0.33
ZNF548-210ENST00000600442 FOXO3O43524 673 aa17.1■□□□□ 0.33
ZNF548-210ENST00000600442 XPCQ01831 940 aaPredicted RBP17.1■□□□□ 0.33
ZNF548-210ENST00000600442 FAM9BQ8IZU0 186 aa17.1■□□□□ 0.33
ZNF548-210ENST00000600442 CFAP53Q96M91 514 aa17.1■□□□□ 0.33
ZNF548-210ENST00000600442 ZRANB1Q9UGI0 708 aa17.1■□□□□ 0.33
ZNF548-210ENST00000600442 BCL9LQ86UU0 1499 aa17.1■□□□□ 0.33
ZNF548-210ENST00000600442 PPP2R1AP30153 589 aa17.09■□□□□ 0.33
ZNF548-210ENST00000600442 NGDNQ8NEJ9 315 aaKnown RBP17.09■□□□□ 0.33
ZNF548-210ENST00000600442 EDC4Q6P2E9 1401 aaKnown RBP17.09■□□□□ 0.33
ZNF548-210ENST00000600442 PXDNQ92626 1479 aa17.09■□□□□ 0.33
ZNF548-210ENST00000600442 USP32Q8NFA0 1604 aa17.08■□□□□ 0.32
ZNF548-210ENST00000600442 CDC42BPGQ6DT37 1551 aa17.08■□□□□ 0.32
ZNF548-210ENST00000600442 CCDC125Q86Z20 511 aa17.08■□□□□ 0.32
ZNF548-210ENST00000600442 WDR43Q15061 677 aaKnown RBP eCLIP17.07■□□□□ 0.32
ZNF548-210ENST00000600442 GJD4Q96KN9 370 aaPredicted RBP17.07■□□□□ 0.32
ZNF548-210ENST00000600442 CPSF1Q10570 1443 aaKnown RBP17.06■□□□□ 0.32
ZNF548-210ENST00000600442 NUTM2FA1L443 756 aa17.06■□□□□ 0.32
ZNF548-210ENST00000600442 ACEP12821 1306 aa17.05■□□□□ 0.32
ZNF548-210ENST00000600442 PRR36Q9H6K5 1346 aa17.05■□□□□ 0.32
ZNF548-210ENST00000600442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.05■□□□□ 0.32
ZNF548-210ENST00000600442 PNISRQ8TF01 805 aaKnown RBP17.05■□□□□ 0.32
ZNF548-210ENST00000600442 FYB1O15117 783 aa17.04■□□□□ 0.32
ZNF548-210ENST00000600442 COG3Q96JB2 828 aa17.04■□□□□ 0.32
ZNF548-210ENST00000600442 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.04■□□□□ 0.32
ZNF548-210ENST00000600442 BRWD3Q6RI45 1802 aa17.03■□□□□ 0.32
ZNF548-210ENST00000600442 TTC21AQ8NDW8 1320 aa17.03■□□□□ 0.32
ZNF548-210ENST00000600442 HNRNPUQ00839 825 aaKnown RBP eCLIP17.03■□□□□ 0.32
ZNF548-210ENST00000600442 CD163L1Q9NR16 1453 aa17.03■□□□□ 0.32
ZNF548-210ENST00000600442 CCDC184Q52MB2 194 aa17.02■□□□□ 0.32
ZNF548-210ENST00000600442 GGNBP2Q9H3C7 697 aa17.02■□□□□ 0.32
ZNF548-210ENST00000600442 PHF8Q9UPP1 1060 aa17.02■□□□□ 0.32
ZNF548-210ENST00000600442 RGPD8O14715 1765 aaPredicted RBP17.02■□□□□ 0.31
ZNF548-210ENST00000600442 TNNT2P45379 298 aaPredicted RBP17.01■□□□□ 0.31
ZNF548-210ENST00000600442 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
ZNF548-210ENST00000600442 INSRP06213 1382 aa17.01■□□□□ 0.31
ZNF548-210ENST00000600442 SPATA31A3Q5VYP0 1347 aa17■□□□□ 0.31
ZNF548-210ENST00000600442 GLI3P10071 1580 aa17■□□□□ 0.31
ZNF548-210ENST00000600442 ITSN1Q15811 1721 aa17■□□□□ 0.31
ZNF548-210ENST00000600442 PMFBP1Q8TBY8 1022 aa17■□□□□ 0.31
ZNF548-210ENST00000600442 FMN2Q9NZ56 1722 aa17■□□□□ 0.31
ZNF548-210ENST00000600442 POLR3AO14802 1390 aaPredicted RBP17■□□□□ 0.31
ZNF548-210ENST00000600442 PSME1Q06323 249 aa16.99■□□□□ 0.31
ZNF548-210ENST00000600442 NUDCQ9Y266 331 aa16.99■□□□□ 0.31
ZNF548-210ENST00000600442 SLIT2O94813 1529 aa16.99■□□□□ 0.31
ZNF548-210ENST00000600442 TTC21BQ7Z4L5 1316 aa16.98■□□□□ 0.31
ZNF548-210ENST00000600442 USP6P35125 1406 aa16.98■□□□□ 0.31
ZNF548-210ENST00000600442 KRT28Q7Z3Y7 464 aa16.98■□□□□ 0.31
ZNF548-210ENST00000600442 KIF1AQ12756 1690 aa16.97■□□□□ 0.31
ZNF548-210ENST00000600442 MTHFSP49914 203 aa16.97■□□□□ 0.31
ZNF548-210ENST00000600442 BLMP54132 1417 aaPredicted RBP16.96■□□□□ 0.31
ZNF548-210ENST00000600442 TOPAZ1Q8N9V7 1692 aa16.95■□□□□ 0.3
ZNF548-210ENST00000600442 DEFB132Q7Z7B7 95 aa16.95■□□□□ 0.3
ZNF548-210ENST00000600442 PNNQ9H307 717 aaKnown RBP16.95■□□□□ 0.3
ZNF548-210ENST00000600442 PAK3O75914 559 aaPredicted RBP16.94■□□□□ 0.3
ZNF548-210ENST00000600442 NME9Q86XW9 330 aa16.94■□□□□ 0.3
ZNF548-210ENST00000600442 SEPT12Q8IYM1 358 aa16.94■□□□□ 0.3
ZNF548-210ENST00000600442 CABLES1Q8TDN4 633 aa16.94■□□□□ 0.3
ZNF548-210ENST00000600442 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
ZNF548-210ENST00000600442 HAP1P54257 671 aaPredicted RBP16.93■□□□□ 0.3
ZNF548-210ENST00000600442 ZBED9Q6R2W3 1325 aa16.93■□□□□ 0.3
ZNF548-210ENST00000600442 AATKQ6ZMQ8 1374 aa16.92■□□□□ 0.3
ZNF548-210ENST00000600442 VPS72Q15906 364 aa16.92■□□□□ 0.3
ZNF548-210ENST00000600442 NGEFQ8N5V2 710 aa16.92■□□□□ 0.3
ZNF548-210ENST00000600442 NWD2Q9ULI1 1742 aa16.92■□□□□ 0.3
ZNF548-210ENST00000600442 PLCH1Q4KWH8 1693 aa16.91■□□□□ 0.3
ZNF548-210ENST00000600442 MON2Q7Z3U7 1717 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms