RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 DIAPH1O60610 1272 aaKnown RBP28.11■■■□□ 2.09
GRAMD1A-212ENST00000600231 CCDC61Q9Y6R9 512 aa28.09■■■□□ 2.09
GRAMD1A-212ENST00000600231 CPS1P31327 1500 aa28.09■■■□□ 2.09
GRAMD1A-212ENST00000600231 POLKQ9UBT6 870 aa28.08■■■□□ 2.09
GRAMD1A-212ENST00000600231 KDM2BQ8NHM5 1336 aa28.08■■■□□ 2.09
GRAMD1A-212ENST00000600231 ROBO2Q9HCK4 1378 aa28.08■■■□□ 2.09
GRAMD1A-212ENST00000600231 ANP32EQ9BTT0 268 aa28.08■■■□□ 2.08
GRAMD1A-212ENST00000600231 EDC4Q6P2E9 1401 aaKnown RBP28.07■■■□□ 2.08
GRAMD1A-212ENST00000600231 TMPOP42166 694 aaKnown RBP28.07■■■□□ 2.08
GRAMD1A-212ENST00000600231 SKAP1Q86WV1 359 aa28.07■■■□□ 2.08
GRAMD1A-212ENST00000600231 PPM1GO15355 546 aaPredicted RBP28.06■■■□□ 2.08
GRAMD1A-212ENST00000600231 PLPPR3Q6T4P5 718 aa28.06■■■□□ 2.08
GRAMD1A-212ENST00000600231 RARSP54136 660 aaKnown RBP28.06■■■□□ 2.08
GRAMD1A-212ENST00000600231 PLEKHG1Q9ULL1 1385 aa28.05■■■□□ 2.08
GRAMD1A-212ENST00000600231 NME9Q86XW9 330 aa28.05■■■□□ 2.08
GRAMD1A-212ENST00000600231 MAPK8IP3Q9UPT6 1336 aa28.05■■■□□ 2.08
GRAMD1A-212ENST00000600231 MYH16Q9H6N6 1097 aa28.04■■■□□ 2.08
GRAMD1A-212ENST00000600231 PDE3AQ14432 1141 aa28.03■■■□□ 2.08
GRAMD1A-212ENST00000600231 PRR36Q9H6K5 1346 aa28.03■■■□□ 2.08
GRAMD1A-212ENST00000600231 CENPQQ7L2Z9 268 aaPredicted RBP28.02■■■□□ 2.08
GRAMD1A-212ENST00000600231 ZRANB1Q9UGI0 708 aa28.02■■■□□ 2.08
GRAMD1A-212ENST00000600231 TRIM35Q9UPQ4 493 aa28.02■■■□□ 2.08
GRAMD1A-212ENST00000600231 SLC26A8Q96RN1 970 aa28.02■■■□□ 2.08
GRAMD1A-212ENST00000600231 CANXP27824 592 aaKnown RBP28.01■■■□□ 2.08
GRAMD1A-212ENST00000600231 MAP2P11137 1827 aaKnown RBP28.01■■■□□ 2.08
GRAMD1A-212ENST00000600231 MS4A1P11836 297 aa28.01■■■□□ 2.07
GRAMD1A-212ENST00000600231 CDC42BPGQ6DT37 1551 aa28■■■□□ 2.07
GRAMD1A-212ENST00000600231 FRAT1Q92837 279 aaPredicted RBP28■■■□□ 2.07
GRAMD1A-212ENST00000600231 C3P01024 1663 aa28■■■□□ 2.07
GRAMD1A-212ENST00000600231 PANK1Q8TE04 598 aa27.99■■■□□ 2.07
GRAMD1A-212ENST00000600231 EID1Q9Y6B2 187 aa27.99■■■□□ 2.07
GRAMD1A-212ENST00000600231 EMILIN1Q9Y6C2 1016 aa27.98■■■□□ 2.07
GRAMD1A-212ENST00000600231 PDE4AP27815 886 aa27.98■■■□□ 2.07
GRAMD1A-212ENST00000600231 BCL2L13Q9BXK5 485 aa27.97■■■□□ 2.07
GRAMD1A-212ENST00000600231 FCHSD2O94868 740 aa27.97■■■□□ 2.07
GRAMD1A-212ENST00000600231 RIPK4P57078 832 aa27.97■■■□□ 2.07
GRAMD1A-212ENST00000600231 TSR2Q969E8 191 aaKnown RBP27.97■■■□□ 2.07
GRAMD1A-212ENST00000600231 PNNQ9H307 717 aaKnown RBP27.97■■■□□ 2.07
GRAMD1A-212ENST00000600231 COG6Q9Y2V7 657 aa27.96■■■□□ 2.07
GRAMD1A-212ENST00000600231 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.95■■■□□ 2.07
GRAMD1A-212ENST00000600231 ZNF692Q9BU19 519 aaPredicted RBP27.95■■■□□ 2.07
GRAMD1A-212ENST00000600231 MON2Q7Z3U7 1717 aa27.95■■■□□ 2.07
GRAMD1A-212ENST00000600231 TRHP20396 242 aaPredicted RBP27.95■■■□□ 2.06
GRAMD1A-212ENST00000600231 COG3Q96JB2 828 aa27.94■■■□□ 2.06
GRAMD1A-212ENST00000600231 BACH2Q9BYV9 841 aa27.94■■■□□ 2.06
GRAMD1A-212ENST00000600231 PTPRUQ92729 1446 aa27.94■■■□□ 2.06
GRAMD1A-212ENST00000600231 RSPH6AQ9H0K4 717 aa27.94■■■□□ 2.06
GRAMD1A-212ENST00000600231 NUTM2FA1L443 756 aa27.93■■■□□ 2.06
GRAMD1A-212ENST00000600231 PRKAR2BP31323 418 aa27.93■■■□□ 2.06
GRAMD1A-212ENST00000600231 FER1L4A9Z1Z3 1794 aa27.93■■■□□ 2.06
GRAMD1A-212ENST00000600231 AKAP12Q02952 1782 aa27.92■■■□□ 2.06
GRAMD1A-212ENST00000600231 AATKQ6ZMQ8 1374 aa27.92■■■□□ 2.06
GRAMD1A-212ENST00000600231 SLIT1O75093 1534 aa27.91■■■□□ 2.06
GRAMD1A-212ENST00000600231 LRRC7Q96NW7 1537 aa27.91■■■□□ 2.06
GRAMD1A-212ENST00000600231 ARHGAP23Q9P227 1491 aa27.91■■■□□ 2.06
GRAMD1A-212ENST00000600231 TNNQ9UQP3 1299 aa27.91■■■□□ 2.06
GRAMD1A-212ENST00000600231 HMOX1P09601 288 aa27.9■■■□□ 2.06
GRAMD1A-212ENST00000600231 EXOSC9Q06265 439 aaKnown RBP27.9■■■□□ 2.06
GRAMD1A-212ENST00000600231 RRS1Q15050 365 aaKnown RBP27.9■■■□□ 2.06
GRAMD1A-212ENST00000600231 ITSN1Q15811 1721 aa27.9■■■□□ 2.06
GRAMD1A-212ENST00000600231 AMOTL2Q9Y2J4 779 aa27.9■■■□□ 2.06
GRAMD1A-212ENST00000600231 IL13P35225 146 aa27.89■■■□□ 2.06
GRAMD1A-212ENST00000600231 ANP32AP39687 249 aaKnown RBP27.89■■■□□ 2.06
GRAMD1A-212ENST00000600231 IL16Q14005 1332 aa27.89■■■□□ 2.06
GRAMD1A-212ENST00000600231 RLBP1P12271 317 aa27.89■■■□□ 2.06
GRAMD1A-212ENST00000600231 CLUAP1Q96AJ1 413 aa27.89■■■□□ 2.06
GRAMD1A-212ENST00000600231 THEMISQ8N1K5 641 aaPredicted RBP27.88■■■□□ 2.05
GRAMD1A-212ENST00000600231 TBX22Q9Y458 520 aa27.88■■■□□ 2.05
GRAMD1A-212ENST00000600231 ACEP12821 1306 aa27.88■■■□□ 2.05
GRAMD1A-212ENST00000600231 CT47B1P0C2W7 299 aaPredicted RBP27.87■■■□□ 2.05
GRAMD1A-212ENST00000600231 CDK12Q9NYV4 1490 aaPredicted RBP27.87■■■□□ 2.05
GRAMD1A-212ENST00000600231 PHACTR3Q96KR7 559 aa27.87■■■□□ 2.05
GRAMD1A-212ENST00000600231 IGHDP01880 384 aa27.86■■■□□ 2.05
GRAMD1A-212ENST00000600231 PLEKHG3A1L390 1219 aa27.85■■■□□ 2.05
GRAMD1A-212ENST00000600231 NEFMP07197 916 aa27.85■■■□□ 2.05
GRAMD1A-212ENST00000600231 ERICH6Q7L0X2 663 aa27.85■■■□□ 2.05
GRAMD1A-212ENST00000600231 TTC21BQ7Z4L5 1316 aa27.84■■■□□ 2.05
GRAMD1A-212ENST00000600231 MYT1Q01538 1121 aa27.82■■■□□ 2.04
GRAMD1A-212ENST00000600231 IPO9Q96P70 1041 aaKnown RBP27.82■■■□□ 2.04
GRAMD1A-212ENST00000600231 TOPAZ1Q8N9V7 1692 aa27.81■■■□□ 2.04
GRAMD1A-212ENST00000600231 NFE2L2Q16236 605 aa27.8■■■□□ 2.04
GRAMD1A-212ENST00000600231 SMC4Q9NTJ3 1288 aa27.8■■■□□ 2.04
GRAMD1A-212ENST00000600231 NPM2Q86SE8 214 aaKnown RBP27.8■■■□□ 2.04
GRAMD1A-212ENST00000600231 ZKSCAN2Q63HK3 967 aa27.79■■■□□ 2.04
GRAMD1A-212ENST00000600231 SSH1Q8WYL5 1049 aa27.79■■■□□ 2.04
GRAMD1A-212ENST00000600231 USP6P35125 1406 aa27.79■■■□□ 2.04
GRAMD1A-212ENST00000600231 RGS3P49796 1198 aa27.78■■■□□ 2.04
GRAMD1A-212ENST00000600231 NOP58Q9Y2X3 529 aaKnown RBP27.78■■■□□ 2.04
GRAMD1A-212ENST00000600231 PTCH1Q13635 1447 aa27.77■■■□□ 2.04
GRAMD1A-212ENST00000600231 NRKQ7Z2Y5 1582 aa27.77■■■□□ 2.04
GRAMD1A-212ENST00000600231 AAMPQ13685 434 aa27.76■■■□□ 2.03
GRAMD1A-212ENST00000600231 PAK3O75914 559 aaPredicted RBP27.75■■■□□ 2.03
GRAMD1A-212ENST00000600231 PMFBP1Q8TBY8 1022 aa27.75■■■□□ 2.03
GRAMD1A-212ENST00000600231 THUMPD2Q9BTF0 503 aaKnown RBP27.75■■■□□ 2.03
GRAMD1A-212ENST00000600231 PCDHB15Q9Y5E8 787 aa27.75■■■□□ 2.03
GRAMD1A-212ENST00000600231 DZIP1LQ8IYY4 767 aaKnown RBP27.75■■■□□ 2.03
GRAMD1A-212ENST00000600231 LAS1LQ9Y4W2 734 aaKnown RBP27.74■■■□□ 2.03
GRAMD1A-212ENST00000600231 OVOS2A0A0J9YW53 1432 aa27.74■■■□□ 2.03
GRAMD1A-212ENST00000600231 OVOS2Q6IE36 1432 aa27.74■■■□□ 2.03
GRAMD1A-212ENST00000600231 MVPQ14764 893 aaKnown RBP27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms