RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-227ENST00000600026 POLR3GLQ9BT43 218 aa30.47■■■□□ 2.47
LTBP4-227ENST00000600026 COL22A1Q8NFW1 1626 aaPredicted RBP30.46■■■□□ 2.47
LTBP4-227ENST00000600026 SPATA31A3Q5VYP0 1347 aa30.45■■■□□ 2.46
LTBP4-227ENST00000600026 PNPLA6Q8IY17 1366 aa30.44■■■□□ 2.46
LTBP4-227ENST00000600026 KIF7Q2M1P5 1343 aa30.44■■■□□ 2.46
LTBP4-227ENST00000600026 A0A1W2PP64 1363 aa30.43■■■□□ 2.46
LTBP4-227ENST00000600026 KTN1Q86UP2 1357 aaKnown RBP30.42■■■□□ 2.46
LTBP4-227ENST00000600026 POTEAQ6S8J7 498 aa30.42■■■□□ 2.46
LTBP4-227ENST00000600026 BRD4O60885 1362 aaPredicted RBP30.41■■■□□ 2.46
LTBP4-227ENST00000600026 SSH2Q76I76 1423 aa30.41■■■□□ 2.46
LTBP4-227ENST00000600026 HDGFL2Q7Z4V5 671 aaPredicted RBP30.41■■■□□ 2.46
LTBP4-227ENST00000600026 ZNF692Q9BU19 519 aaPredicted RBP30.41■■■□□ 2.46
LTBP4-227ENST00000600026 ANKRD36BQ8N2N9 1353 aa30.41■■■□□ 2.46
LTBP4-227ENST00000600026 TERF2IPQ9NYB0 399 aa30.4■■■□□ 2.46
LTBP4-227ENST00000600026 PAK3O75914 559 aaPredicted RBP30.39■■■□□ 2.46
LTBP4-227ENST00000600026 CCDC7Q96M83 1385 aa30.39■■■□□ 2.45
LTBP4-227ENST00000600026 ABCA3Q99758 1704 aa30.39■■■□□ 2.45
LTBP4-227ENST00000600026 PIK3C2AO00443 1686 aa30.38■■■□□ 2.45
LTBP4-227ENST00000600026 ARHGEF10O15013 1369 aa30.38■■■□□ 2.45
LTBP4-227ENST00000600026 CRYBG1Q9Y4K1 1723 aa30.36■■■□□ 2.45
LTBP4-227ENST00000600026 LMOD2Q6P5Q4 547 aa30.35■■■□□ 2.45
LTBP4-227ENST00000600026 WASHC2AQ641Q2 1341 aa30.35■■■□□ 2.45
LTBP4-227ENST00000600026 EDC4Q6P2E9 1401 aaKnown RBP30.35■■■□□ 2.45
LTBP4-227ENST00000600026 TTC21BQ7Z4L5 1316 aa30.33■■■□□ 2.45
LTBP4-227ENST00000600026 SPATA31A6Q5VVP1 1343 aa30.32■■■□□ 2.44
LTBP4-227ENST00000600026 MARF1Q9Y4F3 1742 aaKnown RBP30.32■■■□□ 2.44
LTBP4-227ENST00000600026 PHRF1Q9P1Y6 1649 aaKnown RBP30.32■■■□□ 2.44
LTBP4-227ENST00000600026 LRP6O75581 1613 aa30.3■■■□□ 2.44
LTBP4-227ENST00000600026 TTC21AQ8NDW8 1320 aa30.3■■■□□ 2.44
LTBP4-227ENST00000600026 KIF20BQ96Q89 1820 aa30.3■■■□□ 2.44
LTBP4-227ENST00000600026 USP54Q70EL1 1684 aa30.3■■■□□ 2.44
LTBP4-227ENST00000600026 ABTB2Q8N961 1025 aa30.28■■■□□ 2.44
LTBP4-227ENST00000600026 NSD3Q9BZ95 1437 aa30.27■■■□□ 2.44
LTBP4-227ENST00000600026 NUTM2GQ5VZR2 741 aa30.26■■■□□ 2.43
LTBP4-227ENST00000600026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.26■■■□□ 2.43
LTBP4-227ENST00000600026 PLEKHG5O94827 1062 aa30.25■■■□□ 2.43
LTBP4-227ENST00000600026 NUTM2BA6NNL0 878 aaPredicted RBP30.24■■■□□ 2.43
LTBP4-227ENST00000600026 NUTM2EB1AL46 878 aaPredicted RBP30.24■■■□□ 2.43
LTBP4-227ENST00000600026 NUTM2AQ8IVF1 878 aaPredicted RBP30.24■■■□□ 2.43
LTBP4-227ENST00000600026 CABLES1Q8TDN4 633 aa30.23■■■□□ 2.43
LTBP4-227ENST00000600026 CARD14Q9BXL6 1004 aa30.23■■■□□ 2.43
LTBP4-227ENST00000600026 NME9Q86XW9 330 aa30.22■■■□□ 2.43
LTBP4-227ENST00000600026 PANK3Q9H999 370 aa30.22■■■□□ 2.43
LTBP4-227ENST00000600026 SLIT3O75094 1523 aa30.22■■■□□ 2.43
LTBP4-227ENST00000600026 USP19O94966 1318 aa30.21■■■□□ 2.43
LTBP4-227ENST00000600026 NLRP13Q86W25 1043 aa30.2■■■□□ 2.43
LTBP4-227ENST00000600026 USP31Q70CQ4 1352 aa30.19■■■□□ 2.42
LTBP4-227ENST00000600026 NLRP6P59044 892 aa30.19■■■□□ 2.42
LTBP4-227ENST00000600026 ZRANB1Q9UGI0 708 aa30.18■■■□□ 2.42
LTBP4-227ENST00000600026 OVOS2A0A0J9YW53 1432 aa30.18■■■□□ 2.42
LTBP4-227ENST00000600026 OVOS2Q6IE36 1432 aa30.18■■■□□ 2.42
LTBP4-227ENST00000600026 DDX10Q13206 875 aaKnown RBP30.17■■■□□ 2.42
LTBP4-227ENST00000600026 ANKRD26Q9UPS8 1709 aa30.16■■■□□ 2.42
LTBP4-227ENST00000600026 HAP1P54257 671 aaPredicted RBP30.16■■■□□ 2.42
LTBP4-227ENST00000600026 ADAMTS2O95450 1211 aa30.14■■■□□ 2.42
LTBP4-227ENST00000600026 MEX3CQ5U5Q3 659 aaKnown RBP30.12■■■□□ 2.41
LTBP4-227ENST00000600026 FYB1O15117 783 aa30.11■■■□□ 2.41
LTBP4-227ENST00000600026 NFAT5O94916 1531 aa30.11■■■□□ 2.41
LTBP4-227ENST00000600026 PLCH1Q4KWH8 1693 aa30.1■■■□□ 2.41
LTBP4-227ENST00000600026 CGNL1Q0VF96 1302 aa30.09■■■□□ 2.41
LTBP4-227ENST00000600026 GGNBP2Q9H3C7 697 aa30.09■■■□□ 2.41
LTBP4-227ENST00000600026 COL14A1Q05707 1796 aaKnown RBP30.08■■■□□ 2.41
LTBP4-227ENST00000600026 GCP02774 474 aa30.07■■■□□ 2.4
LTBP4-227ENST00000600026 COG3Q96JB2 828 aa30.07■■■□□ 2.4
LTBP4-227ENST00000600026 LTN1O94822 1766 aa30.06■■■□□ 2.4
LTBP4-227ENST00000600026 C8orf37Q96NL8 207 aa30.06■■■□□ 2.4
LTBP4-227ENST00000600026 KNSTRNQ9Y448 316 aa30.06■■■□□ 2.4
LTBP4-227ENST00000600026 KIAA0232Q92628 1395 aa30.04■■■□□ 2.4
LTBP4-227ENST00000600026 PER1O15534 1290 aaPredicted RBP30.04■■■□□ 2.4
LTBP4-227ENST00000600026 KCNH5Q8NCM2 988 aa30.04■■■□□ 2.4
LTBP4-227ENST00000600026 CPDO75976 1380 aa30.03■■■□□ 2.4
LTBP4-227ENST00000600026 NWD2Q9ULI1 1742 aa30.03■■■□□ 2.4
LTBP4-227ENST00000600026 SOX12O15370 315 aa30.03■■■□□ 2.4
LTBP4-227ENST00000600026 ZC3H6P61129 1189 aaKnown RBP30.03■■■□□ 2.4
LTBP4-227ENST00000600026 NSD2O96028 1365 aa30.03■■■□□ 2.4
LTBP4-227ENST00000600026 LMO7Q8WWI1 1683 aa30.01■■■□□ 2.39
LTBP4-227ENST00000600026 NRAPQ86VF7 1730 aa30■■■□□ 2.39
LTBP4-227ENST00000600026 TNKS1BP1Q9C0C2 1729 aaKnown RBP30■■■□□ 2.39
LTBP4-227ENST00000600026 AMER1Q5JTC6 1135 aaPredicted RBP30■■■□□ 2.39
LTBP4-227ENST00000600026 PRDM11Q9NQV5 511 aa30■■■□□ 2.39
LTBP4-227ENST00000600026 COL18A1P39060 1754 aa30■■■□□ 2.39
LTBP4-227ENST00000600026 NGLY1Q96IV0 654 aa29.99■■■□□ 2.39
LTBP4-227ENST00000600026 SLIT2O94813 1529 aa29.99■■■□□ 2.39
LTBP4-227ENST00000600026 FAM83GA6ND36 823 aa29.98■■■□□ 2.39
LTBP4-227ENST00000600026 AFF2P51816 1311 aa29.97■■■□□ 2.39
LTBP4-227ENST00000600026 RGPD5Q99666 1765 aa29.96■■■□□ 2.39
LTBP4-227ENST00000600026 CHRNA2Q15822 529 aa29.96■■■□□ 2.39
LTBP4-227ENST00000600026 ZBTB7CA1YPR0 619 aa29.95■■■□□ 2.39
LTBP4-227ENST00000600026 ARHGEF25Q86VW2 580 aa29.94■■■□□ 2.38
LTBP4-227ENST00000600026 FNBP4Q8N3X1 1017 aaPredicted RBP29.94■■■□□ 2.38
LTBP4-227ENST00000600026 ABCC6O95255 1503 aa29.94■■■□□ 2.38
LTBP4-227ENST00000600026 NPC1L1Q9UHC9 1359 aa29.93■■■□□ 2.38
LTBP4-227ENST00000600026 DIEXFQ68CQ4 756 aaKnown RBP29.93■■■□□ 2.38
LTBP4-227ENST00000600026 UPF1Q92900 1129 aaKnown RBP eCLIP29.93■■■□□ 2.38
LTBP4-227ENST00000600026 MAP2P11137 1827 aaKnown RBP29.92■■■□□ 2.38
LTBP4-227ENST00000600026 BCL9LQ86UU0 1499 aa29.92■■■□□ 2.38
LTBP4-227ENST00000600026 CAMTA1Q9Y6Y1 1673 aa29.91■■■□□ 2.38
LTBP4-227ENST00000600026 FBLN1P23142 703 aa29.91■■■□□ 2.38
LTBP4-227ENST00000600026 AATKQ6ZMQ8 1374 aa29.9■■■□□ 2.38
LTBP4-227ENST00000600026 CC2D1BQ5T0F9 858 aaKnown RBP29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms