RNA–Protein interactions for RNA: ENST00000599569.2

SSR4P1-203, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 2,260 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-203ENST00000599569 CENPQQ7L2Z9 268 aaPredicted RBP20.58■□□□□ 0.88
SSR4P1-203ENST00000599569 MED14O60244 1454 aa20.57■□□□□ 0.88
SSR4P1-203ENST00000599569 ANKLE2Q86XL3 938 aa20.57■□□□□ 0.88
SSR4P1-203ENST00000599569 DLC1Q96QB1 1528 aa20.57■□□□□ 0.88
SSR4P1-203ENST00000599569 HDGFL2Q7Z4V5 671 aaPredicted RBP20.57■□□□□ 0.88
SSR4P1-203ENST00000599569 BACH2Q9BYV9 841 aa20.56■□□□□ 0.88
SSR4P1-203ENST00000599569 CABP1Q9NZU7 370 aa20.55■□□□□ 0.88
SSR4P1-203ENST00000599569 PDE3AQ14432 1141 aa20.54■□□□□ 0.88
SSR4P1-203ENST00000599569 IPO9Q96P70 1041 aaKnown RBP20.54■□□□□ 0.88
SSR4P1-203ENST00000599569 WAPLQ7Z5K2 1190 aa20.53■□□□□ 0.88
SSR4P1-203ENST00000599569 ANKRD26Q9UPS8 1709 aa20.53■□□□□ 0.88
SSR4P1-203ENST00000599569 NOP58Q9Y2X3 529 aaKnown RBP20.53■□□□□ 0.88
SSR4P1-203ENST00000599569 NCKAP5LQ9HCH0 1330 aa20.52■□□□□ 0.88
SSR4P1-203ENST00000599569 HSPA2P54652 639 aa20.51■□□□□ 0.87
SSR4P1-203ENST00000599569 SKAP1Q86WV1 359 aa20.51■□□□□ 0.87
SSR4P1-203ENST00000599569 COL3A1P02461 1466 aaPredicted RBP20.51■□□□□ 0.87
SSR4P1-203ENST00000599569 ADGRB2O60241 1585 aa20.51■□□□□ 0.87
SSR4P1-203ENST00000599569 TBX22Q9Y458 520 aa20.5■□□□□ 0.87
SSR4P1-203ENST00000599569 RARSP54136 660 aaKnown RBP20.5■□□□□ 0.87
SSR4P1-203ENST00000599569 U2SURPO15042 1029 aaKnown RBP20.49■□□□□ 0.87
SSR4P1-203ENST00000599569 PLEKHF1Q96S99 279 aa20.49■□□□□ 0.87
SSR4P1-203ENST00000599569 PTPRUQ92729 1446 aa20.48■□□□□ 0.87
SSR4P1-203ENST00000599569 MYH16Q9H6N6 1097 aa20.48■□□□□ 0.87
SSR4P1-203ENST00000599569 CANXP27824 592 aaKnown RBP20.47■□□□□ 0.87
SSR4P1-203ENST00000599569 ATP7BP35670 1465 aa20.47■□□□□ 0.87
SSR4P1-203ENST00000599569 PNPLA6Q8IY17 1366 aa20.47■□□□□ 0.87
SSR4P1-203ENST00000599569 NPHP4O75161 1426 aaPredicted RBP20.46■□□□□ 0.87
SSR4P1-203ENST00000599569 LMTK3Q96Q04 1460 aa20.46■□□□□ 0.87
SSR4P1-203ENST00000599569 PAK3O75914 559 aaPredicted RBP20.46■□□□□ 0.87
SSR4P1-203ENST00000599569 DIP2AQ14689 1571 aa20.45■□□□□ 0.86
SSR4P1-203ENST00000599569 KIF20BQ96Q89 1820 aa20.45■□□□□ 0.86
SSR4P1-203ENST00000599569 DIAPH1O60610 1272 aaKnown RBP20.44■□□□□ 0.86
SSR4P1-203ENST00000599569 TMPOP42166 694 aaKnown RBP20.44■□□□□ 0.86
SSR4P1-203ENST00000599569 AMOTL2Q9Y2J4 779 aa20.44■□□□□ 0.86
SSR4P1-203ENST00000599569 WASLO00401 505 aaPredicted RBP20.44■□□□□ 0.86
SSR4P1-203ENST00000599569 PANK1Q8TE04 598 aa20.44■□□□□ 0.86
SSR4P1-203ENST00000599569 FRAT1Q92837 279 aaPredicted RBP20.44■□□□□ 0.86
SSR4P1-203ENST00000599569 ZBTB47Q9UFB7 747 aaPredicted RBP20.44■□□□□ 0.86
SSR4P1-203ENST00000599569 ROBO2Q9HCK4 1378 aa20.44■□□□□ 0.86
SSR4P1-203ENST00000599569 TECPR2O15040 1411 aa20.43■□□□□ 0.86
SSR4P1-203ENST00000599569 MAPK8IP3Q9UPT6 1336 aa20.43■□□□□ 0.86
SSR4P1-203ENST00000599569 KNDC1Q76NI1 1749 aa20.43■□□□□ 0.86
SSR4P1-203ENST00000599569 NPM2Q86SE8 214 aaKnown RBP20.43■□□□□ 0.86
SSR4P1-203ENST00000599569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.86
SSR4P1-203ENST00000599569 SIRT1Q96EB6 747 aa20.43■□□□□ 0.86
SSR4P1-203ENST00000599569 COG6Q9Y2V7 657 aa20.43■□□□□ 0.86
SSR4P1-203ENST00000599569 CLUAP1Q96AJ1 413 aa20.42■□□□□ 0.86
SSR4P1-203ENST00000599569 PNNQ9H307 717 aaKnown RBP20.42■□□□□ 0.86
SSR4P1-203ENST00000599569 CPS1P31327 1500 aa20.42■□□□□ 0.86
SSR4P1-203ENST00000599569 TRIM35Q9UPQ4 493 aa20.41■□□□□ 0.86
SSR4P1-203ENST00000599569 FAM135BQ49AJ0 1406 aa20.4■□□□□ 0.86
SSR4P1-203ENST00000599569 CT47B1P0C2W7 299 aaPredicted RBP20.4■□□□□ 0.86
SSR4P1-203ENST00000599569 CPSF1Q10570 1443 aaKnown RBP20.4■□□□□ 0.86
SSR4P1-203ENST00000599569 AAMPQ13685 434 aa20.39■□□□□ 0.86
SSR4P1-203ENST00000599569 POLKQ9UBT6 870 aa20.39■□□□□ 0.86
SSR4P1-203ENST00000599569 IGHDP01880 384 aa20.39■□□□□ 0.85
SSR4P1-203ENST00000599569 PPIP5K1Q6PFW1 1433 aa20.39■□□□□ 0.85
SSR4P1-203ENST00000599569 KCNA6P17658 529 aa20.38■□□□□ 0.85
SSR4P1-203ENST00000599569 BCL2L13Q9BXK5 485 aa20.38■□□□□ 0.85
SSR4P1-203ENST00000599569 EDC4Q6P2E9 1401 aaKnown RBP20.38■□□□□ 0.85
SSR4P1-203ENST00000599569 FCHSD2O94868 740 aa20.38■□□□□ 0.85
SSR4P1-203ENST00000599569 IL16Q14005 1332 aa20.37■□□□□ 0.85
SSR4P1-203ENST00000599569 RIPK4P57078 832 aa20.37■□□□□ 0.85
SSR4P1-203ENST00000599569 NUDT16Q96DE0 195 aaKnown RBP20.37■□□□□ 0.85
SSR4P1-203ENST00000599569 PIK3R4Q99570 1358 aa20.37■□□□□ 0.85
SSR4P1-203ENST00000599569 XRN1Q8IZH2 1706 aaKnown RBP20.36■□□□□ 0.85
SSR4P1-203ENST00000599569 RLBP1P12271 317 aa20.36■□□□□ 0.85
SSR4P1-203ENST00000599569 FAM161AQ3B820 660 aa20.36■□□□□ 0.85
SSR4P1-203ENST00000599569 TSR2Q969E8 191 aaKnown RBP20.36■□□□□ 0.85
SSR4P1-203ENST00000599569 CDC42BPGQ6DT37 1551 aa20.36■□□□□ 0.85
SSR4P1-203ENST00000599569 FBLN1P23142 703 aa20.36■□□□□ 0.85
SSR4P1-203ENST00000599569 CCDC61Q9Y6R9 512 aa20.36■□□□□ 0.85
SSR4P1-203ENST00000599569 PPM1GO15355 546 aaPredicted RBP20.35■□□□□ 0.85
SSR4P1-203ENST00000599569 CHD2O14647 1828 aaKnown RBP20.35■□□□□ 0.85
SSR4P1-203ENST00000599569 RGS3P49796 1198 aa20.34■□□□□ 0.85
SSR4P1-203ENST00000599569 TNNQ9UQP3 1299 aa20.34■□□□□ 0.85
SSR4P1-203ENST00000599569 EXOSC9Q06265 439 aaKnown RBP20.34■□□□□ 0.85
SSR4P1-203ENST00000599569 PTCH1Q13635 1447 aa20.33■□□□□ 0.85
SSR4P1-203ENST00000599569 C8orf34Q49A92 452 aa20.33■□□□□ 0.85
SSR4P1-203ENST00000599569 MAP2P11137 1827 aaKnown RBP20.33■□□□□ 0.85
SSR4P1-203ENST00000599569 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.33■□□□□ 0.85
SSR4P1-203ENST00000599569 STRCQ7RTU9 1775 aa20.33■□□□□ 0.84
SSR4P1-203ENST00000599569 NME9Q86XW9 330 aa20.32■□□□□ 0.84
SSR4P1-203ENST00000599569 RBM33Q96EV2 1170 aaKnown RBP20.32■□□□□ 0.84
SSR4P1-203ENST00000599569 RSPH6AQ9H0K4 717 aa20.32■□□□□ 0.84
SSR4P1-203ENST00000599569 ZKSCAN2Q63HK3 967 aa20.32■□□□□ 0.84
SSR4P1-203ENST00000599569 PMFBP1Q8TBY8 1022 aa20.32■□□□□ 0.84
SSR4P1-203ENST00000599569 PRKAR2BP31323 418 aa20.3■□□□□ 0.84
SSR4P1-203ENST00000599569 AATKQ6ZMQ8 1374 aa20.3■□□□□ 0.84
SSR4P1-203ENST00000599569 LRRC7Q96NW7 1537 aa20.3■□□□□ 0.84
SSR4P1-203ENST00000599569 NEFMP07197 916 aa20.3■□□□□ 0.84
SSR4P1-203ENST00000599569 ZNF692Q9BU19 519 aaPredicted RBP20.3■□□□□ 0.84
SSR4P1-203ENST00000599569 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
SSR4P1-203ENST00000599569 COG3Q96JB2 828 aa20.29■□□□□ 0.84
SSR4P1-203ENST00000599569 SMC4Q9NTJ3 1288 aa20.29■□□□□ 0.84
SSR4P1-203ENST00000599569 PCDHB15Q9Y5E8 787 aa20.29■□□□□ 0.84
SSR4P1-203ENST00000599569 MVPQ14764 893 aaKnown RBP20.28■□□□□ 0.84
SSR4P1-203ENST00000599569 DZIP1LQ8IYY4 767 aaKnown RBP20.28■□□□□ 0.84
SSR4P1-203ENST00000599569 ZRANB1Q9UGI0 708 aa20.28■□□□□ 0.84
SSR4P1-203ENST00000599569 MON2Q7Z3U7 1717 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms