RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 FOXO3O43524 673 aa29.93■■■□□ 2.38
LTBP4-224ENST00000599016 DIEXFQ68CQ4 756 aaKnown RBP29.93■■■□□ 2.38
LTBP4-224ENST00000599016 UPF1Q92900 1129 aaKnown RBP eCLIP29.93■■■□□ 2.38
LTBP4-224ENST00000599016 BRD4O60885 1362 aaPredicted RBP29.92■■■□□ 2.38
LTBP4-224ENST00000599016 NPHP3Q7Z494 1330 aa29.92■■■□□ 2.38
LTBP4-224ENST00000599016 LRP6O75581 1613 aa29.9■■■□□ 2.38
LTBP4-224ENST00000599016 NRKQ7Z2Y5 1582 aa29.9■■■□□ 2.38
LTBP4-224ENST00000599016 CGNL1Q0VF96 1302 aa29.89■■■□□ 2.38
LTBP4-224ENST00000599016 KIF20BQ96Q89 1820 aa29.87■■■□□ 2.37
LTBP4-224ENST00000599016 NHSL1Q5SYE7 1610 aa29.87■■■□□ 2.37
LTBP4-224ENST00000599016 KRT28Q7Z3Y7 464 aa29.87■■■□□ 2.37
LTBP4-224ENST00000599016 PHLPP1O60346 1717 aa29.87■■■□□ 2.37
LTBP4-224ENST00000599016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.86■■■□□ 2.37
LTBP4-224ENST00000599016 TTC21BQ7Z4L5 1316 aa29.86■■■□□ 2.37
LTBP4-224ENST00000599016 TTC21AQ8NDW8 1320 aa29.86■■■□□ 2.37
LTBP4-224ENST00000599016 SSH2Q76I76 1423 aa29.84■■■□□ 2.37
LTBP4-224ENST00000599016 NPC1L1Q9UHC9 1359 aa29.83■■■□□ 2.37
LTBP4-224ENST00000599016 PAK3O75914 559 aaPredicted RBP29.83■■■□□ 2.37
LTBP4-224ENST00000599016 TRPM3Q9HCF6 1732 aaPredicted RBP29.82■■■□□ 2.36
LTBP4-224ENST00000599016 NSD2O96028 1365 aa29.82■■■□□ 2.36
LTBP4-224ENST00000599016 XPCQ01831 940 aaPredicted RBP29.82■■■□□ 2.36
LTBP4-224ENST00000599016 AMER1Q5JTC6 1135 aaPredicted RBP29.82■■■□□ 2.36
LTBP4-224ENST00000599016 COL16A1Q07092 1604 aaPredicted RBP29.82■■■□□ 2.36
LTBP4-224ENST00000599016 DDX17Q92841 729 aaKnown RBP29.81■■■□□ 2.36
LTBP4-224ENST00000599016 PXDNQ92626 1479 aa29.8■■■□□ 2.36
LTBP4-224ENST00000599016 ANKRD26Q9UPS8 1709 aa29.8■■■□□ 2.36
LTBP4-224ENST00000599016 AHDC1Q5TGY3 1603 aaPredicted RBP29.8■■■□□ 2.36
LTBP4-224ENST00000599016 ANP32CO43423 234 aa29.79■■■□□ 2.36
LTBP4-224ENST00000599016 SBNO1A3KN83 1393 aa29.78■■■□□ 2.36
LTBP4-224ENST00000599016 CNGB1Q14028 1251 aaPredicted RBP29.78■■■□□ 2.36
LTBP4-224ENST00000599016 CC2D1BQ5T0F9 858 aaKnown RBP29.78■■■□□ 2.36
LTBP4-224ENST00000599016 SOS2Q07890 1332 aaPredicted RBP29.77■■■□□ 2.36
LTBP4-224ENST00000599016 FYB1O15117 783 aa29.77■■■□□ 2.36
LTBP4-224ENST00000599016 MEX3CQ5U5Q3 659 aaKnown RBP29.77■■■□□ 2.36
LTBP4-224ENST00000599016 NME9Q86XW9 330 aa29.76■■■□□ 2.35
LTBP4-224ENST00000599016 SPATA31A6Q5VVP1 1343 aa29.75■■■□□ 2.35
LTBP4-224ENST00000599016 ZNF772Q68DY9 489 aaPredicted RBP29.75■■■□□ 2.35
LTBP4-224ENST00000599016 ABTB2Q8N961 1025 aa29.75■■■□□ 2.35
LTBP4-224ENST00000599016 PIK3C2AO00443 1686 aa29.75■■■□□ 2.35
LTBP4-224ENST00000599016 GGNBP2Q9H3C7 697 aa29.74■■■□□ 2.35
LTBP4-224ENST00000599016 ALS2Q96Q42 1657 aa29.74■■■□□ 2.35
LTBP4-224ENST00000599016 TNS3Q68CZ2 1445 aa29.73■■■□□ 2.35
LTBP4-224ENST00000599016 COG3Q96JB2 828 aa29.73■■■□□ 2.35
LTBP4-224ENST00000599016 LMOD2Q6P5Q4 547 aa29.72■■■□□ 2.35
LTBP4-224ENST00000599016 MORC1Q86VD1 984 aa29.72■■■□□ 2.35
LTBP4-224ENST00000599016 RALBP1Q15311 655 aa29.71■■■□□ 2.35
LTBP4-224ENST00000599016 USP31Q70CQ4 1352 aa29.71■■■□□ 2.35
LTBP4-224ENST00000599016 SPATA31A3Q5VYP0 1347 aa29.71■■■□□ 2.35
LTBP4-224ENST00000599016 USP54Q70EL1 1684 aa29.7■■■□□ 2.35
LTBP4-224ENST00000599016 NLRP6P59044 892 aa29.7■■■□□ 2.35
LTBP4-224ENST00000599016 ARHGEF10O15013 1369 aa29.69■■■□□ 2.34
LTBP4-224ENST00000599016 NUTM2BA6NNL0 878 aaPredicted RBP29.69■■■□□ 2.34
LTBP4-224ENST00000599016 NUTM2EB1AL46 878 aaPredicted RBP29.69■■■□□ 2.34
LTBP4-224ENST00000599016 RXRBP28702 533 aa29.69■■■□□ 2.34
LTBP4-224ENST00000599016 NUTM2AQ8IVF1 878 aaPredicted RBP29.69■■■□□ 2.34
LTBP4-224ENST00000599016 PRKRIP1Q9H875 184 aaPredicted RBP29.69■■■□□ 2.34
LTBP4-224ENST00000599016 NLRP13Q86W25 1043 aa29.68■■■□□ 2.34
LTBP4-224ENST00000599016 PARD3Q8TEW0 1356 aa29.67■■■□□ 2.34
LTBP4-224ENST00000599016 LRRC59Q96AG4 307 aaKnown RBP29.67■■■□□ 2.34
LTBP4-224ENST00000599016 ZRANB1Q9UGI0 708 aa29.67■■■□□ 2.34
LTBP4-224ENST00000599016 OVOS2A0A0J9YW53 1432 aa29.66■■■□□ 2.34
LTBP4-224ENST00000599016 OVOS2Q6IE36 1432 aa29.66■■■□□ 2.34
LTBP4-224ENST00000599016 NUTM2GQ5VZR2 741 aa29.66■■■□□ 2.34
LTBP4-224ENST00000599016 MARF1Q9Y4F3 1742 aaKnown RBP29.64■■■□□ 2.34
LTBP4-224ENST00000599016 TNNT2P45379 298 aaPredicted RBP29.59■■■□□ 2.33
LTBP4-224ENST00000599016 AFF2P51816 1311 aa29.59■■■□□ 2.33
LTBP4-224ENST00000599016 MYBBP1AQ9BQG0 1328 aaKnown RBP29.58■■■□□ 2.33
LTBP4-224ENST00000599016 USP19O94966 1318 aa29.57■■■□□ 2.32
LTBP4-224ENST00000599016 KCNH5Q8NCM2 988 aa29.57■■■□□ 2.32
LTBP4-224ENST00000599016 MAP2P11137 1827 aaKnown RBP29.57■■■□□ 2.32
LTBP4-224ENST00000599016 SHPRHQ149N8 1683 aa29.56■■■□□ 2.32
LTBP4-224ENST00000599016 SLIT3O75094 1523 aa29.55■■■□□ 2.32
LTBP4-224ENST00000599016 MIER1Q8N108 512 aa29.55■■■□□ 2.32
LTBP4-224ENST00000599016 PHRF1Q9P1Y6 1649 aaKnown RBP29.55■■■□□ 2.32
LTBP4-224ENST00000599016 AATKQ6ZMQ8 1374 aa29.54■■■□□ 2.32
LTBP4-224ENST00000599016 PLEKHG5O94827 1062 aa29.54■■■□□ 2.32
LTBP4-224ENST00000599016 PPP2R1AP30153 589 aa29.54■■■□□ 2.32
LTBP4-224ENST00000599016 CRYBG1Q9Y4K1 1723 aa29.54■■■□□ 2.32
LTBP4-224ENST00000599016 COL22A1Q8NFW1 1626 aaPredicted RBP29.53■■■□□ 2.32
LTBP4-224ENST00000599016 PNPLA6Q8IY17 1366 aa29.52■■■□□ 2.32
LTBP4-224ENST00000599016 SOX12O15370 315 aa29.52■■■□□ 2.32
LTBP4-224ENST00000599016 CDK12Q9NYV4 1490 aaPredicted RBP29.51■■■□□ 2.31
LTBP4-224ENST00000599016 GCP02774 474 aa29.51■■■□□ 2.31
LTBP4-224ENST00000599016 HAP1P54257 671 aaPredicted RBP29.5■■■□□ 2.31
LTBP4-224ENST00000599016 ABCA3Q99758 1704 aa29.5■■■□□ 2.31
LTBP4-224ENST00000599016 RGS12O14924 1447 aa29.49■■■□□ 2.31
LTBP4-224ENST00000599016 CABLES1Q8TDN4 633 aa29.48■■■□□ 2.31
LTBP4-224ENST00000599016 QTRT2Q9H974 415 aaKnown RBP29.48■■■□□ 2.31
LTBP4-224ENST00000599016 NFAT5O94916 1531 aa29.48■■■□□ 2.31
LTBP4-224ENST00000599016 C8orf37Q96NL8 207 aa29.47■■■□□ 2.31
LTBP4-224ENST00000599016 LTN1O94822 1766 aa29.47■■■□□ 2.31
LTBP4-224ENST00000599016 FBLN1P23142 703 aa29.46■■■□□ 2.31
LTBP4-224ENST00000599016 SRCAPQ6ZRS2 3230 aa29.45■■■□□ 2.31
LTBP4-224ENST00000599016 POLKQ9UBT6 870 aa29.45■■■□□ 2.31
LTBP4-224ENST00000599016 CCER2I3L3R5 266 aa29.44■■■□□ 2.3
LTBP4-224ENST00000599016 MTHFSP49914 203 aa29.44■■■□□ 2.3
LTBP4-224ENST00000599016 RRS1Q15050 365 aaKnown RBP29.44■■■□□ 2.3
LTBP4-224ENST00000599016 CFAP53Q96M91 514 aa29.42■■■□□ 2.3
LTBP4-224ENST00000599016 EMILIN1Q9Y6C2 1016 aa29.42■■■□□ 2.3
LTBP4-224ENST00000599016 SMG6Q86US8 1419 aaKnown RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms