RNA–Protein interactions for RNA: ENST00000596778.1

AC003973.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC003973.2, Length 1,394 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003973.2-201ENST00000596778 ATP7BP35670 1465 aa9.38□□□□□ -0.91
AC003973.2-201ENST00000596778 RBM33Q96EV2 1170 aaKnown RBP9.37□□□□□ -0.91
AC003973.2-201ENST00000596778 TESK2Q96S53 571 aa9.37□□□□□ -0.91
AC003973.2-201ENST00000596778 TOPAZ1Q8N9V7 1692 aa9.37□□□□□ -0.91
AC003973.2-201ENST00000596778 NHSL1Q5SYE7 1610 aa9.37□□□□□ -0.91
AC003973.2-201ENST00000596778 ITSN1Q15811 1721 aa9.37□□□□□ -0.91
AC003973.2-201ENST00000596778 EVC2Q86UK5 1308 aa9.37□□□□□ -0.91
AC003973.2-201ENST00000596778 BRD4O60885 1362 aaPredicted RBP9.36□□□□□ -0.91
AC003973.2-201ENST00000596778 NINLQ9Y2I6 1382 aa9.36□□□□□ -0.91
AC003973.2-201ENST00000596778 BRINP3Q76B58 766 aa9.36□□□□□ -0.91
AC003973.2-201ENST00000596778 CCDC61Q9Y6R9 512 aa9.36□□□□□ -0.91
AC003973.2-201ENST00000596778 ATAD2Q6PL18 1390 aa9.36□□□□□ -0.91
AC003973.2-201ENST00000596778 MINK1Q8N4C8 1332 aaPredicted RBP9.35□□□□□ -0.91
AC003973.2-201ENST00000596778 ST20-MTHFSA0A0A6YYL1 179 aa9.35□□□□□ -0.91
AC003973.2-201ENST00000596778 PLEKHG3A1L390 1219 aa9.35□□□□□ -0.91
AC003973.2-201ENST00000596778 EIF4G2P78344 907 aaKnown RBP eCLIP9.35□□□□□ -0.91
AC003973.2-201ENST00000596778 CDCA8Q53HL2 280 aa9.35□□□□□ -0.91
AC003973.2-201ENST00000596778 CDK19Q9BWU1 502 aa9.35□□□□□ -0.91
AC003973.2-201ENST00000596778 POLR3AO14802 1390 aaPredicted RBP9.35□□□□□ -0.91
AC003973.2-201ENST00000596778 ERICH6Q7L0X2 663 aa9.34□□□□□ -0.91
AC003973.2-201ENST00000596778 SOS2Q07890 1332 aaPredicted RBP9.33□□□□□ -0.92
AC003973.2-201ENST00000596778 NPHP3Q7Z494 1330 aa9.33□□□□□ -0.92
AC003973.2-201ENST00000596778 PRR36Q9H6K5 1346 aa9.33□□□□□ -0.92
AC003973.2-201ENST00000596778 TMF1P82094 1093 aa9.33□□□□□ -0.92
AC003973.2-201ENST00000596778 SAFB2Q14151 953 aaKnown RBP eCLIP9.33□□□□□ -0.92
AC003973.2-201ENST00000596778 NUDT16Q96DE0 195 aaKnown RBP9.33□□□□□ -0.92
AC003973.2-201ENST00000596778 COL16A1Q07092 1604 aaPredicted RBP9.33□□□□□ -0.92
AC003973.2-201ENST00000596778 PXDNQ92626 1479 aa9.32□□□□□ -0.92
AC003973.2-201ENST00000596778 NBR1Q14596 966 aa9.32□□□□□ -0.92
AC003973.2-201ENST00000596778 HIRIP3Q9BW71 556 aaPredicted RBP9.32□□□□□ -0.92
AC003973.2-201ENST00000596778 PHF8Q9UPP1 1060 aa9.32□□□□□ -0.92
AC003973.2-201ENST00000596778 SBNO1A3KN83 1393 aa9.31□□□□□ -0.92
AC003973.2-201ENST00000596778 ESCO1Q5FWF5 840 aa9.31□□□□□ -0.92
AC003973.2-201ENST00000596778 ORAI2Q96SN7 254 aa9.31□□□□□ -0.92
AC003973.2-201ENST00000596778 RGPD8O14715 1765 aaPredicted RBP9.3□□□□□ -0.92
AC003973.2-201ENST00000596778 PHLPP1O60346 1717 aa9.3□□□□□ -0.92
AC003973.2-201ENST00000596778 PIP4K2BP78356 416 aa9.3□□□□□ -0.92
AC003973.2-201ENST00000596778 SRPK2P78362 688 aaKnown RBP9.3□□□□□ -0.92
AC003973.2-201ENST00000596778 CPSF1Q10570 1443 aaKnown RBP9.3□□□□□ -0.92
AC003973.2-201ENST00000596778 PPIP5K1Q6PFW1 1433 aa9.3□□□□□ -0.92
AC003973.2-201ENST00000596778 PROM2Q8N271 834 aa9.3□□□□□ -0.92
AC003973.2-201ENST00000596778 SPRYD3Q8NCJ5 442 aa9.3□□□□□ -0.92
AC003973.2-201ENST00000596778 ZNF692Q9BU19 519 aaPredicted RBP9.3□□□□□ -0.92
AC003973.2-201ENST00000596778 TSHZ2Q9NRE2 1034 aa9.3□□□□□ -0.92
AC003973.2-201ENST00000596778 SHPRHQ149N8 1683 aa9.3□□□□□ -0.92
AC003973.2-201ENST00000596778 SSH2Q76I76 1423 aa9.29□□□□□ -0.92
AC003973.2-201ENST00000596778 ECM2O94769 699 aaPredicted RBP9.29□□□□□ -0.92
AC003973.2-201ENST00000596778 HSPA5P11021 654 aaKnown RBP9.29□□□□□ -0.92
AC003973.2-201ENST00000596778 LRRC59Q96AG4 307 aaKnown RBP9.29□□□□□ -0.92
AC003973.2-201ENST00000596778 COL22A1Q8NFW1 1626 aaPredicted RBP9.29□□□□□ -0.92
AC003973.2-201ENST00000596778 TRPM3Q9HCF6 1732 aaPredicted RBP9.29□□□□□ -0.92
AC003973.2-201ENST00000596778 JCADQ9P266 1359 aa9.29□□□□□ -0.92
AC003973.2-201ENST00000596778 DISP3Q9P2K9 1392 aa9.29□□□□□ -0.92
AC003973.2-201ENST00000596778 PSME1Q06323 249 aa9.28□□□□□ -0.92
AC003973.2-201ENST00000596778 ILDR1Q86SU0 546 aaPredicted RBP9.28□□□□□ -0.92
AC003973.2-201ENST00000596778 CABP2Q9NPB3 220 aa9.28□□□□□ -0.92
AC003973.2-201ENST00000596778 CD163L1Q9NR16 1453 aa9.27□□□□□ -0.92
AC003973.2-201ENST00000596778 HSPA1LP34931 641 aa9.27□□□□□ -0.93
AC003973.2-201ENST00000596778 DCBLD2Q96PD2 775 aa9.27□□□□□ -0.93
AC003973.2-201ENST00000596778 AKAP12Q02952 1782 aa9.27□□□□□ -0.93
AC003973.2-201ENST00000596778 SPATA31A6Q5VVP1 1343 aa9.27□□□□□ -0.93
AC003973.2-201ENST00000596778 MED1Q15648 1581 aaPredicted RBP9.27□□□□□ -0.93
AC003973.2-201ENST00000596778 ARHGEF10O15013 1369 aa9.27□□□□□ -0.93
AC003973.2-201ENST00000596778 ALS2Q96Q42 1657 aa9.27□□□□□ -0.93
AC003973.2-201ENST00000596778 USP6P35125 1406 aa9.27□□□□□ -0.93
AC003973.2-201ENST00000596778 TNS3Q68CZ2 1445 aa9.27□□□□□ -0.93
AC003973.2-201ENST00000596778 MON2Q7Z3U7 1717 aa9.27□□□□□ -0.93
AC003973.2-201ENST00000596778 FOXO3O43524 673 aa9.26□□□□□ -0.93
AC003973.2-201ENST00000596778 CABP1Q9NZU7 370 aa9.26□□□□□ -0.93
AC003973.2-201ENST00000596778 NRKQ7Z2Y5 1582 aa9.26□□□□□ -0.93
AC003973.2-201ENST00000596778 ACEP12821 1306 aa9.26□□□□□ -0.93
AC003973.2-201ENST00000596778 SPATA31A3Q5VYP0 1347 aa9.26□□□□□ -0.93
AC003973.2-201ENST00000596778 ANKRD36BQ8N2N9 1353 aa9.26□□□□□ -0.93
AC003973.2-201ENST00000596778 KRT28Q7Z3Y7 464 aa9.25□□□□□ -0.93
AC003973.2-201ENST00000596778 NGDNQ8NEJ9 315 aaKnown RBP9.25□□□□□ -0.93
AC003973.2-201ENST00000596778 TERF2IPQ9NYB0 399 aa9.25□□□□□ -0.93
AC003973.2-201ENST00000596778 MYOM1P52179 1685 aa9.25□□□□□ -0.93
AC003973.2-201ENST00000596778 USP54Q70EL1 1684 aa9.25□□□□□ -0.93
AC003973.2-201ENST00000596778 TTC21AQ8NDW8 1320 aa9.25□□□□□ -0.93
AC003973.2-201ENST00000596778 PNPLA6Q8IY17 1366 aa9.25□□□□□ -0.93
AC003973.2-201ENST00000596778 EDC4Q6P2E9 1401 aaKnown RBP9.25□□□□□ -0.93
AC003973.2-201ENST00000596778 NUTM2FA1L443 756 aa9.24□□□□□ -0.93
AC003973.2-201ENST00000596778 HOMEZQ8IX15 550 aa9.24□□□□□ -0.93
AC003973.2-201ENST00000596778 PMFBP1Q8TBY8 1022 aa9.24□□□□□ -0.93
AC003973.2-201ENST00000596778 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
AC003973.2-201ENST00000596778 POTEB2H3BUK9 544 aa9.23□□□□□ -0.93
AC003973.2-201ENST00000596778 HDGFL2Q7Z4V5 671 aaPredicted RBP9.23□□□□□ -0.93
AC003973.2-201ENST00000596778 A0A1W2PP64 1363 aa9.23□□□□□ -0.93
AC003973.2-201ENST00000596778 USP31Q70CQ4 1352 aa9.23□□□□□ -0.93
AC003973.2-201ENST00000596778 KTN1Q86UP2 1357 aaKnown RBP9.23□□□□□ -0.93
AC003973.2-201ENST00000596778 CRYBG1Q9Y4K1 1723 aa9.22□□□□□ -0.93
AC003973.2-201ENST00000596778 SLC12A5Q9H2X9 1139 aa9.22□□□□□ -0.93
AC003973.2-201ENST00000596778 CCDC7Q96M83 1385 aa9.21□□□□□ -0.94
AC003973.2-201ENST00000596778 USP19O94966 1318 aa9.21□□□□□ -0.94
AC003973.2-201ENST00000596778 KIF7Q2M1P5 1343 aa9.21□□□□□ -0.94
AC003973.2-201ENST00000596778 TTC21BQ7Z4L5 1316 aa9.21□□□□□ -0.94
AC003973.2-201ENST00000596778 KLHL34Q8N239 644 aa9.21□□□□□ -0.94
AC003973.2-201ENST00000596778 DDX17Q92841 729 aaKnown RBP9.21□□□□□ -0.94
AC003973.2-201ENST00000596778 SLIT3O75094 1523 aa9.2□□□□□ -0.94
AC003973.2-201ENST00000596778 C11orf95C9JLR9 678 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms