RNA–Protein interactions for RNA: ENST00000596655.1

C19orf48-207, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 1,639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-207ENST00000596655 ALS2Q96Q42 1657 aa26.42■■□□□ 1.82
C19orf48-207ENST00000596655 NGDNQ8NEJ9 315 aaKnown RBP26.41■■□□□ 1.82
C19orf48-207ENST00000596655 NGLY1Q96IV0 654 aa26.41■■□□□ 1.82
C19orf48-207ENST00000596655 ARHGEF10O15013 1369 aa26.39■■□□□ 1.81
C19orf48-207ENST00000596655 LMOD2Q6P5Q4 547 aa26.39■■□□□ 1.81
C19orf48-207ENST00000596655 SRPK2P78362 688 aaKnown RBP26.38■■□□□ 1.81
C19orf48-207ENST00000596655 CCDC61Q9Y6R9 512 aa26.37■■□□□ 1.81
C19orf48-207ENST00000596655 TESK2Q96S53 571 aa26.36■■□□□ 1.81
C19orf48-207ENST00000596655 PLEKHG5O94827 1062 aa26.35■■□□□ 1.81
C19orf48-207ENST00000596655 CABP2Q9NPB3 220 aa26.35■■□□□ 1.81
C19orf48-207ENST00000596655 CABLES1Q8TDN4 633 aa26.34■■□□□ 1.81
C19orf48-207ENST00000596655 POLR3AO14802 1390 aaPredicted RBP26.34■■□□□ 1.81
C19orf48-207ENST00000596655 PPIP5K1Q6PFW1 1433 aa26.33■■□□□ 1.8
C19orf48-207ENST00000596655 ACEP12821 1306 aa26.32■■□□□ 1.8
C19orf48-207ENST00000596655 CRYBG1Q9Y4K1 1723 aa26.32■■□□□ 1.8
C19orf48-207ENST00000596655 PLEKHG3A1L390 1219 aa26.32■■□□□ 1.8
C19orf48-207ENST00000596655 HAP1P54257 671 aaPredicted RBP26.32■■□□□ 1.8
C19orf48-207ENST00000596655 FNBP4Q8N3X1 1017 aaPredicted RBP26.32■■□□□ 1.8
C19orf48-207ENST00000596655 USP21Q9UK80 565 aa26.32■■□□□ 1.8
C19orf48-207ENST00000596655 EVC2Q86UK5 1308 aa26.31■■□□□ 1.8
C19orf48-207ENST00000596655 KTN1Q86UP2 1357 aaKnown RBP26.31■■□□□ 1.8
C19orf48-207ENST00000596655 RXRBP28702 533 aa26.31■■□□□ 1.8
C19orf48-207ENST00000596655 QTRT2Q9H974 415 aaKnown RBP26.31■■□□□ 1.8
C19orf48-207ENST00000596655 PAK3O75914 559 aaPredicted RBP26.3■■□□□ 1.8
C19orf48-207ENST00000596655 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.28■■□□□ 1.8
C19orf48-207ENST00000596655 BCL9LQ86UU0 1499 aa26.27■■□□□ 1.8
C19orf48-207ENST00000596655 PLCH1Q4KWH8 1693 aa26.27■■□□□ 1.8
C19orf48-207ENST00000596655 SBNO2Q9Y2G9 1366 aa26.26■■□□□ 1.8
C19orf48-207ENST00000596655 CDK12Q9NYV4 1490 aaPredicted RBP26.26■■□□□ 1.79
C19orf48-207ENST00000596655 SLIT2O94813 1529 aa26.25■■□□□ 1.79
C19orf48-207ENST00000596655 RBM6P78332 1123 aaKnown RBP26.25■■□□□ 1.79
C19orf48-207ENST00000596655 ATRNO75882 1429 aa26.24■■□□□ 1.79
C19orf48-207ENST00000596655 TRPC5Q9UL62 973 aaPredicted RBP26.24■■□□□ 1.79
C19orf48-207ENST00000596655 PHRF1Q9P1Y6 1649 aaKnown RBP26.23■■□□□ 1.79
C19orf48-207ENST00000596655 NWD2Q9ULI1 1742 aa26.23■■□□□ 1.79
C19orf48-207ENST00000596655 CCDC184Q52MB2 194 aa26.23■■□□□ 1.79
C19orf48-207ENST00000596655 CABP1Q9NZU7 370 aa26.23■■□□□ 1.79
C19orf48-207ENST00000596655 TMF1P82094 1093 aa26.21■■□□□ 1.79
C19orf48-207ENST00000596655 RGS12O14924 1447 aa26.21■■□□□ 1.79
C19orf48-207ENST00000596655 POLR3GLQ9BT43 218 aa26.21■■□□□ 1.79
C19orf48-207ENST00000596655 AKAP12Q02952 1782 aa26.2■■□□□ 1.78
C19orf48-207ENST00000596655 MRS2Q9HD23 443 aa26.19■■□□□ 1.78
C19orf48-207ENST00000596655 NUTM2GQ5VZR2 741 aa26.18■■□□□ 1.78
C19orf48-207ENST00000596655 COL14A1Q05707 1796 aaKnown RBP26.18■■□□□ 1.78
C19orf48-207ENST00000596655 USP6P35125 1406 aa26.18■■□□□ 1.78
C19orf48-207ENST00000596655 ATAD2Q6PL18 1390 aa26.18■■□□□ 1.78
C19orf48-207ENST00000596655 UNC5CLQ8IV45 518 aa26.17■■□□□ 1.78
C19orf48-207ENST00000596655 NRAPQ86VF7 1730 aa26.16■■□□□ 1.78
C19orf48-207ENST00000596655 FAM83GA6ND36 823 aa26.16■■□□□ 1.78
C19orf48-207ENST00000596655 PER1O15534 1290 aaPredicted RBP26.16■■□□□ 1.78
C19orf48-207ENST00000596655 RALBP1Q15311 655 aa26.15■■□□□ 1.78
C19orf48-207ENST00000596655 ABTB2Q8N961 1025 aa26.15■■□□□ 1.78
C19orf48-207ENST00000596655 BRD4O60885 1362 aaPredicted RBP26.15■■□□□ 1.78
C19orf48-207ENST00000596655 SLC24A1O60721 1099 aa26.14■■□□□ 1.77
C19orf48-207ENST00000596655 GLI3P10071 1580 aa26.13■■□□□ 1.77
C19orf48-207ENST00000596655 NRKQ7Z2Y5 1582 aa26.13■■□□□ 1.77
C19orf48-207ENST00000596655 PELP1Q8IZL8 1130 aaKnown RBP26.13■■□□□ 1.77
C19orf48-207ENST00000596655 PARD3Q8TEW0 1356 aa26.13■■□□□ 1.77
C19orf48-207ENST00000596655 GJD4Q96KN9 370 aaPredicted RBP26.12■■□□□ 1.77
C19orf48-207ENST00000596655 PIK3C2AO00443 1686 aa26.12■■□□□ 1.77
C19orf48-207ENST00000596655 MON2Q7Z3U7 1717 aa26.11■■□□□ 1.77
C19orf48-207ENST00000596655 SSH2Q76I76 1423 aa26.11■■□□□ 1.77
C19orf48-207ENST00000596655 HNRNPUQ00839 825 aaKnown RBP eCLIP26.1■■□□□ 1.77
C19orf48-207ENST00000596655 CDCA8Q53HL2 280 aa26.1■■□□□ 1.77
C19orf48-207ENST00000596655 PRDM11Q9NQV5 511 aa26.1■■□□□ 1.77
C19orf48-207ENST00000596655 USP19O94966 1318 aa26.09■■□□□ 1.77
C19orf48-207ENST00000596655 KIAA0232Q92628 1395 aa26.09■■□□□ 1.77
C19orf48-207ENST00000596655 CPSF1Q10570 1443 aaKnown RBP26.09■■□□□ 1.77
C19orf48-207ENST00000596655 MYBBP1AQ9BQG0 1328 aaKnown RBP26.09■■□□□ 1.77
C19orf48-207ENST00000596655 BTG4Q9NY30 223 aa26.08■■□□□ 1.77
C19orf48-207ENST00000596655 MYOM1P52179 1685 aa26.08■■□□□ 1.76
C19orf48-207ENST00000596655 VPS72Q15906 364 aa26.07■■□□□ 1.76
C19orf48-207ENST00000596655 NLRP13Q86W25 1043 aa26.07■■□□□ 1.76
C19orf48-207ENST00000596655 ZNF692Q9BU19 519 aaPredicted RBP26.07■■□□□ 1.76
C19orf48-207ENST00000596655 ZC3H6P61129 1189 aaKnown RBP26.06■■□□□ 1.76
C19orf48-207ENST00000596655 CD163L1Q9NR16 1453 aa26.04■■□□□ 1.76
C19orf48-207ENST00000596655 CCDC9Q9Y3X0 531 aaKnown RBP26.04■■□□□ 1.76
C19orf48-207ENST00000596655 ZBED9Q6R2W3 1325 aa26.04■■□□□ 1.76
C19orf48-207ENST00000596655 NLRP6P59044 892 aa26.03■■□□□ 1.76
C19orf48-207ENST00000596655 CHRNA2Q15822 529 aa26.03■■□□□ 1.76
C19orf48-207ENST00000596655 TMC1Q8TDI8 760 aa26.03■■□□□ 1.76
C19orf48-207ENST00000596655 TTC21BQ7Z4L5 1316 aa26.03■■□□□ 1.76
C19orf48-207ENST00000596655 SLIT3O75094 1523 aa26.03■■□□□ 1.76
C19orf48-207ENST00000596655 BRWD3Q6RI45 1802 aa26.02■■□□□ 1.76
C19orf48-207ENST00000596655 FAM9BQ8IZU0 186 aa26.02■■□□□ 1.76
C19orf48-207ENST00000596655 PUS7Q96PZ0 661 aaKnown RBP26.02■■□□□ 1.76
C19orf48-207ENST00000596655 SUPT16HQ9Y5B9 1047 aaKnown RBP26.02■■□□□ 1.76
C19orf48-207ENST00000596655 SLC12A5Q9H2X9 1139 aa26.01■■□□□ 1.75
C19orf48-207ENST00000596655 LMO7Q8WWI1 1683 aa26■■□□□ 1.75
C19orf48-207ENST00000596655 CPDO75976 1380 aa26■■□□□ 1.75
C19orf48-207ENST00000596655 TTC21AQ8NDW8 1320 aa26■■□□□ 1.75
C19orf48-207ENST00000596655 GCP02774 474 aa26■■□□□ 1.75
C19orf48-207ENST00000596655 PNISRQ8TF01 805 aaKnown RBP26■■□□□ 1.75
C19orf48-207ENST00000596655 UPF1Q92900 1129 aaKnown RBP eCLIP26■■□□□ 1.75not detected■■■■■ 31.6
C19orf48-207ENST00000596655 PANK3Q9H999 370 aa26■■□□□ 1.75
C19orf48-207ENST00000596655 NPC1L1Q9UHC9 1359 aa25.97■■□□□ 1.75
C19orf48-207ENST00000596655 HDGFL2Q7Z4V5 671 aaPredicted RBP25.96■■□□□ 1.75
C19orf48-207ENST00000596655 CAMTA1Q9Y6Y1 1673 aa25.96■■□□□ 1.75
C19orf48-207ENST00000596655 A0A1W2PP64 1363 aa25.96■■□□□ 1.75
C19orf48-207ENST00000596655 NINLQ9Y2I6 1382 aa25.95■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms