RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CENPJQ9HC77 1338 aaPredicted RBP24.55■■□□□ 1.52
CCDC9-202ENST00000595659 A0A0G2JS52 829 aa24.54■■□□□ 1.52
CCDC9-202ENST00000595659 MYT1Q01538 1121 aa24.54■■□□□ 1.52
CCDC9-202ENST00000595659 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.54■■□□□ 1.52
CCDC9-202ENST00000595659 PRDM11Q9NQV5 511 aa24.53■■□□□ 1.52
CCDC9-202ENST00000595659 PLEKHG3A1L390 1219 aa24.52■■□□□ 1.52
CCDC9-202ENST00000595659 FAM98CQ17RN3 349 aaKnown RBP24.52■■□□□ 1.52
CCDC9-202ENST00000595659 ABCA3Q99758 1704 aa24.52■■□□□ 1.52
CCDC9-202ENST00000595659 ALS2Q96Q42 1657 aa24.51■■□□□ 1.51
CCDC9-202ENST00000595659 ONECUT3O60422 494 aaPredicted RBP24.51■■□□□ 1.51
CCDC9-202ENST00000595659 CHRNA2Q15822 529 aa24.51■■□□□ 1.51
CCDC9-202ENST00000595659 POLR3AO14802 1390 aaPredicted RBP24.5■■□□□ 1.51
CCDC9-202ENST00000595659 PLCH1Q4KWH8 1693 aa24.5■■□□□ 1.51
CCDC9-202ENST00000595659 KIAA1210Q9ULL0 1709 aa24.49■■□□□ 1.51
CCDC9-202ENST00000595659 ZC3H6P61129 1189 aaKnown RBP24.49■■□□□ 1.51
CCDC9-202ENST00000595659 CCDC125Q86Z20 511 aa24.49■■□□□ 1.51
CCDC9-202ENST00000595659 KRT27Q7Z3Y8 459 aa24.48■■□□□ 1.51
CCDC9-202ENST00000595659 KIAA0232Q92628 1395 aa24.48■■□□□ 1.51
CCDC9-202ENST00000595659 ABTB2Q8N961 1025 aa24.47■■□□□ 1.51
CCDC9-202ENST00000595659 EP400Q96L91 3159 aa24.46■■□□□ 1.51
CCDC9-202ENST00000595659 PPIP5K1Q6PFW1 1433 aa24.45■■□□□ 1.51
CCDC9-202ENST00000595659 NWD2Q9ULI1 1742 aa24.45■■□□□ 1.5
CCDC9-202ENST00000595659 DEFB132Q7Z7B7 95 aa24.45■■□□□ 1.5
CCDC9-202ENST00000595659 STRN4Q9NRL3 753 aa24.45■■□□□ 1.5
CCDC9-202ENST00000595659 CABP1Q9NZU7 370 aa24.44■■□□□ 1.5
CCDC9-202ENST00000595659 SPATA31A5Q5VU36 1347 aa24.43■■□□□ 1.5
CCDC9-202ENST00000595659 SPATA31A7Q8IWB4 1347 aa24.43■■□□□ 1.5
CCDC9-202ENST00000595659 ZRANB1Q9UGI0 708 aa24.43■■□□□ 1.5
CCDC9-202ENST00000595659 ITSN1Q15811 1721 aa24.43■■□□□ 1.5
CCDC9-202ENST00000595659 FAM182BQ5T319 152 aa24.42■■□□□ 1.5
CCDC9-202ENST00000595659 BLMP54132 1417 aaPredicted RBP24.42■■□□□ 1.5
CCDC9-202ENST00000595659 COL14A1Q05707 1796 aaKnown RBP24.42■■□□□ 1.5
CCDC9-202ENST00000595659 ROCK2O75116 1388 aaKnown RBP24.42■■□□□ 1.5
CCDC9-202ENST00000595659 SF3B2Q13435 895 aaKnown RBP24.4■■□□□ 1.5
CCDC9-202ENST00000595659 NRAPQ86VF7 1730 aa24.39■■□□□ 1.5
CCDC9-202ENST00000595659 TOPAZ1Q8N9V7 1692 aa24.39■■□□□ 1.49
CCDC9-202ENST00000595659 EVA1CP58658 441 aa24.38■■□□□ 1.49
CCDC9-202ENST00000595659 USP35Q9P2H5 1018 aa24.38■■□□□ 1.49
CCDC9-202ENST00000595659 CRYBG1Q9Y4K1 1723 aa24.38■■□□□ 1.49
CCDC9-202ENST00000595659 BRWD3Q6RI45 1802 aa24.38■■□□□ 1.49
CCDC9-202ENST00000595659 EVC2Q86UK5 1308 aa24.37■■□□□ 1.49
CCDC9-202ENST00000595659 NLRP13Q86W25 1043 aa24.37■■□□□ 1.49
CCDC9-202ENST00000595659 ZBTB7CA1YPR0 619 aa24.36■■□□□ 1.49
CCDC9-202ENST00000595659 SPATA31A1Q5TZJ5 1347 aa24.35■■□□□ 1.49
CCDC9-202ENST00000595659 GCP02774 474 aa24.35■■□□□ 1.49
CCDC9-202ENST00000595659 USP19O94966 1318 aa24.35■■□□□ 1.49
CCDC9-202ENST00000595659 QRICH2Q9H0J4 1663 aa24.34■■□□□ 1.49
CCDC9-202ENST00000595659 NLRP6P59044 892 aa24.33■■□□□ 1.49
CCDC9-202ENST00000595659 LARP1Q6PKG0 1096 aaKnown RBP24.33■■□□□ 1.49
CCDC9-202ENST00000595659 TRPM1Q7Z4N2 1603 aa24.32■■□□□ 1.48
CCDC9-202ENST00000595659 PHRF1Q9P1Y6 1649 aaKnown RBP24.32■■□□□ 1.48
CCDC9-202ENST00000595659 USP6P35125 1406 aa24.31■■□□□ 1.48
CCDC9-202ENST00000595659 CPDO75976 1380 aa24.29■■□□□ 1.48
CCDC9-202ENST00000595659 SSH2Q76I76 1423 aa24.29■■□□□ 1.48
CCDC9-202ENST00000595659 CARD11Q9BXL7 1154 aa24.28■■□□□ 1.48
CCDC9-202ENST00000595659 NRKQ7Z2Y5 1582 aa24.28■■□□□ 1.48
CCDC9-202ENST00000595659 CAMTA1Q9Y6Y1 1673 aa24.27■■□□□ 1.48
CCDC9-202ENST00000595659 BAG6P46379 1132 aa24.27■■□□□ 1.48
CCDC9-202ENST00000595659 BRD4O60885 1362 aaPredicted RBP24.27■■□□□ 1.48
CCDC9-202ENST00000595659 EN1Q05925 392 aaPredicted RBP24.26■■□□□ 1.47
CCDC9-202ENST00000595659 SOX12O15370 315 aa24.25■■□□□ 1.47
CCDC9-202ENST00000595659 TTC21BQ7Z4L5 1316 aa24.25■■□□□ 1.47
CCDC9-202ENST00000595659 TONSLQ96HA7 1378 aa24.25■■□□□ 1.47
CCDC9-202ENST00000595659 SRCAPQ6ZRS2 3230 aa24.24■■□□□ 1.47
CCDC9-202ENST00000595659 TCP11L2Q8N4U5 519 aa24.24■■□□□ 1.47
CCDC9-202ENST00000595659 ZNF692Q9BU19 519 aaPredicted RBP24.24■■□□□ 1.47
CCDC9-202ENST00000595659 BARGINQ6ZT62 677 aa24.23■■□□□ 1.47
CCDC9-202ENST00000595659 THSD7AQ9UPZ6 1657 aa24.23■■□□□ 1.47
CCDC9-202ENST00000595659 TRIM37O94972 964 aa24.22■■□□□ 1.47
CCDC9-202ENST00000595659 PDE3BQ13370 1112 aa24.22■■□□□ 1.47
CCDC9-202ENST00000595659 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.46
CCDC9-202ENST00000595659 FAM196AQ6ZSG2 479 aa24.2■■□□□ 1.46
CCDC9-202ENST00000595659 PSDA5PKW4 1024 aaPredicted RBP24.19■■□□□ 1.46
CCDC9-202ENST00000595659 COL5A2P05997 1499 aaPredicted RBP24.19■■□□□ 1.46
CCDC9-202ENST00000595659 KTN1Q86UP2 1357 aaKnown RBP24.18■■□□□ 1.46
CCDC9-202ENST00000595659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.18■■□□□ 1.46
CCDC9-202ENST00000595659 TMC1Q8TDI8 760 aa24.18■■□□□ 1.46
CCDC9-202ENST00000595659 AXIN2Q9Y2T1 843 aa24.18■■□□□ 1.46
CCDC9-202ENST00000595659 LMO7Q8WWI1 1683 aa24.18■■□□□ 1.46
CCDC9-202ENST00000595659 AATKQ6ZMQ8 1374 aa24.17■■□□□ 1.46
CCDC9-202ENST00000595659 EZH2Q15910 746 aaKnown RBP24.16■■□□□ 1.46
CCDC9-202ENST00000595659 THRAP3Q9Y2W1 955 aaKnown RBP24.16■■□□□ 1.46
CCDC9-202ENST00000595659 CPSF1Q10570 1443 aaKnown RBP24.16■■□□□ 1.46
CCDC9-202ENST00000595659 SLIT3O75094 1523 aa24.15■■□□□ 1.46
CCDC9-202ENST00000595659 TTC21AQ8NDW8 1320 aa24.15■■□□□ 1.46
CCDC9-202ENST00000595659 TOM1L2Q6ZVM7 507 aa24.15■■□□□ 1.46
CCDC9-202ENST00000595659 ARHGEF25Q86VW2 580 aa24.15■■□□□ 1.46
CCDC9-202ENST00000595659 SLC12A5Q9H2X9 1139 aa24.15■■□□□ 1.46
CCDC9-202ENST00000595659 APBA3O96018 575 aa24.14■■□□□ 1.45
CCDC9-202ENST00000595659 PIK3C2AO00443 1686 aa24.14■■□□□ 1.45
CCDC9-202ENST00000595659 CRB1P82279 1406 aa24.13■■□□□ 1.45
CCDC9-202ENST00000595659 KCNH5Q8NCM2 988 aa24.13■■□□□ 1.45
CCDC9-202ENST00000595659 SBNO2Q9Y2G9 1366 aa24.13■■□□□ 1.45
CCDC9-202ENST00000595659 NME9Q86XW9 330 aa24.11■■□□□ 1.45
CCDC9-202ENST00000595659 CSB-PGBD3P0DP91 1061 aa24.1■■□□□ 1.45
CCDC9-202ENST00000595659 CAMKK2Q96RR4 588 aa24.1■■□□□ 1.45
CCDC9-202ENST00000595659 R3HDM1Q15032 1099 aaKnown RBP24.09■■□□□ 1.45
CCDC9-202ENST00000595659 WDR17Q8IZU2 1322 aa24.09■■□□□ 1.45
CCDC9-202ENST00000595659 ST20-MTHFSA0A0A6YYL1 179 aa24.08■■□□□ 1.45
CCDC9-202ENST00000595659 HDGFL2Q7Z4V5 671 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms