RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 CARD14Q9BXL6 1004 aa31.17■■■□□ 2.58
SNRNP70-204ENST00000595231 PANK3Q9H999 370 aa31.17■■■□□ 2.58
SNRNP70-204ENST00000595231 SPATA31A3Q5VYP0 1347 aa31.17■■■□□ 2.58
SNRNP70-204ENST00000595231 BRD4O60885 1362 aaPredicted RBP31.16■■■□□ 2.58
SNRNP70-204ENST00000595231 NRKQ7Z2Y5 1582 aa31.16■■■□□ 2.58
SNRNP70-204ENST00000595231 PAK3O75914 559 aaPredicted RBP31.14■■■□□ 2.58
SNRNP70-204ENST00000595231 TTC21BQ7Z4L5 1316 aa31.14■■■□□ 2.58
SNRNP70-204ENST00000595231 EDC4Q6P2E9 1401 aaKnown RBP31.13■■■□□ 2.57
SNRNP70-204ENST00000595231 TNS3Q68CZ2 1445 aa31.12■■■□□ 2.57
SNRNP70-204ENST00000595231 ALS2Q96Q42 1657 aa31.12■■■□□ 2.57
SNRNP70-204ENST00000595231 ILDR1Q86SU0 546 aaPredicted RBP31.11■■■□□ 2.57
SNRNP70-204ENST00000595231 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.09■■■□□ 2.57
SNRNP70-204ENST00000595231 TTC21AQ8NDW8 1320 aa31.09■■■□□ 2.57
SNRNP70-204ENST00000595231 NSD3Q9BZ95 1437 aa31.07■■■□□ 2.56
SNRNP70-204ENST00000595231 LMOD2Q6P5Q4 547 aa31.06■■■□□ 2.56
SNRNP70-204ENST00000595231 ABTB2Q8N961 1025 aa31.06■■■□□ 2.56
SNRNP70-204ENST00000595231 PNPLA6Q8IY17 1366 aa31.06■■■□□ 2.56
SNRNP70-204ENST00000595231 JCADQ9P266 1359 aa31.06■■■□□ 2.56
SNRNP70-204ENST00000595231 ARHGEF10O15013 1369 aa31.05■■■□□ 2.56
SNRNP70-204ENST00000595231 PER1O15534 1290 aaPredicted RBP31.05■■■□□ 2.56
SNRNP70-204ENST00000595231 PIK3C2AO00443 1686 aa31.05■■■□□ 2.56
SNRNP70-204ENST00000595231 SHPRHQ149N8 1683 aa31.03■■■□□ 2.56
SNRNP70-204ENST00000595231 NUTM2GQ5VZR2 741 aa31.03■■■□□ 2.56
SNRNP70-204ENST00000595231 NME9Q86XW9 330 aa31.03■■■□□ 2.56
SNRNP70-204ENST00000595231 DDX10Q13206 875 aaKnown RBP31.02■■■□□ 2.56
SNRNP70-204ENST00000595231 FYB1O15117 783 aa31.01■■■□□ 2.55
SNRNP70-204ENST00000595231 COL22A1Q8NFW1 1626 aaPredicted RBP31.01■■■□□ 2.55
SNRNP70-204ENST00000595231 ZRANB1Q9UGI0 708 aa31■■■□□ 2.55
SNRNP70-204ENST00000595231 NLRP6P59044 892 aa30.99■■■□□ 2.55
SNRNP70-204ENST00000595231 USP31Q70CQ4 1352 aa30.98■■■□□ 2.55
SNRNP70-204ENST00000595231 NLRP13Q86W25 1043 aa30.97■■■□□ 2.55
SNRNP70-204ENST00000595231 KNSTRNQ9Y448 316 aa30.97■■■□□ 2.55
SNRNP70-204ENST00000595231 MARF1Q9Y4F3 1742 aaKnown RBP30.97■■■□□ 2.55
SNRNP70-204ENST00000595231 CABLES1Q8TDN4 633 aa30.97■■■□□ 2.55
SNRNP70-204ENST00000595231 CGNL1Q0VF96 1302 aa30.96■■■□□ 2.55
SNRNP70-204ENST00000595231 MED1Q15648 1581 aaPredicted RBP30.96■■■□□ 2.55
SNRNP70-204ENST00000595231 CRYBG1Q9Y4K1 1723 aa30.94■■■□□ 2.54
SNRNP70-204ENST00000595231 USP19O94966 1318 aa30.94■■■□□ 2.54
SNRNP70-204ENST00000595231 PLEKHG5O94827 1062 aa30.93■■■□□ 2.54
SNRNP70-204ENST00000595231 AMER1Q5JTC6 1135 aaPredicted RBP30.93■■■□□ 2.54
SNRNP70-204ENST00000595231 GGNBP2Q9H3C7 697 aa30.93■■■□□ 2.54
SNRNP70-204ENST00000595231 KIF20BQ96Q89 1820 aa30.93■■■□□ 2.54
SNRNP70-204ENST00000595231 USP54Q70EL1 1684 aa30.93■■■□□ 2.54
SNRNP70-204ENST00000595231 OVOS2A0A0J9YW53 1432 aa30.93■■■□□ 2.54
SNRNP70-204ENST00000595231 OVOS2Q6IE36 1432 aa30.93■■■□□ 2.54
SNRNP70-204ENST00000595231 SPATA31A6Q5VVP1 1343 aa30.92■■■□□ 2.54
SNRNP70-204ENST00000595231 ABCA3Q99758 1704 aa30.9■■■□□ 2.54
SNRNP70-204ENST00000595231 COG3Q96JB2 828 aa30.88■■■□□ 2.53
SNRNP70-204ENST00000595231 SLIT3O75094 1523 aa30.88■■■□□ 2.53
SNRNP70-204ENST00000595231 PHRF1Q9P1Y6 1649 aaKnown RBP30.88■■■□□ 2.53
SNRNP70-204ENST00000595231 GCP02774 474 aa30.87■■■□□ 2.53
SNRNP70-204ENST00000595231 NUTM2BA6NNL0 878 aaPredicted RBP30.87■■■□□ 2.53
SNRNP70-204ENST00000595231 NUTM2EB1AL46 878 aaPredicted RBP30.87■■■□□ 2.53
SNRNP70-204ENST00000595231 NUTM2AQ8IVF1 878 aaPredicted RBP30.87■■■□□ 2.53
SNRNP70-204ENST00000595231 NSD2O96028 1365 aa30.85■■■□□ 2.53
SNRNP70-204ENST00000595231 LRP6O75581 1613 aa30.85■■■□□ 2.53
SNRNP70-204ENST00000595231 NPC1L1Q9UHC9 1359 aa30.85■■■□□ 2.53
SNRNP70-204ENST00000595231 ANKRD26Q9UPS8 1709 aa30.83■■■□□ 2.53
SNRNP70-204ENST00000595231 HAP1P54257 671 aaPredicted RBP30.82■■■□□ 2.52
SNRNP70-204ENST00000595231 CC2D1BQ5T0F9 858 aaKnown RBP30.81■■■□□ 2.52
SNRNP70-204ENST00000595231 KCNH5Q8NCM2 988 aa30.81■■■□□ 2.52
SNRNP70-204ENST00000595231 SOX12O15370 315 aa30.8■■■□□ 2.52
SNRNP70-204ENST00000595231 NFAT5O94916 1531 aa30.8■■■□□ 2.52
SNRNP70-204ENST00000595231 FBLN1P23142 703 aa30.79■■■□□ 2.52
SNRNP70-204ENST00000595231 ADAMTS2O95450 1211 aa30.78■■■□□ 2.52
SNRNP70-204ENST00000595231 ZC3H6P61129 1189 aaKnown RBP30.78■■■□□ 2.52
SNRNP70-204ENST00000595231 CPDO75976 1380 aa30.75■■■□□ 2.51
SNRNP70-204ENST00000595231 CNGB1Q14028 1251 aaPredicted RBP30.75■■■□□ 2.51
SNRNP70-204ENST00000595231 MORC1Q86VD1 984 aa30.75■■■□□ 2.51
SNRNP70-204ENST00000595231 KIAA0232Q92628 1395 aa30.75■■■□□ 2.51
SNRNP70-204ENST00000595231 ARHGEF25Q86VW2 580 aa30.74■■■□□ 2.51
SNRNP70-204ENST00000595231 FAM83GA6ND36 823 aa30.73■■■□□ 2.51
SNRNP70-204ENST00000595231 TNNT2P45379 298 aaPredicted RBP30.71■■■□□ 2.51
SNRNP70-204ENST00000595231 AATKQ6ZMQ8 1374 aa30.7■■■□□ 2.51
SNRNP70-204ENST00000595231 PRDM11Q9NQV5 511 aa30.7■■■□□ 2.5
SNRNP70-204ENST00000595231 RRS1Q15050 365 aaKnown RBP30.68■■■□□ 2.5
SNRNP70-204ENST00000595231 CHRNA2Q15822 529 aa30.68■■■□□ 2.5
SNRNP70-204ENST00000595231 MEX3CQ5U5Q3 659 aaKnown RBP30.68■■■□□ 2.5
SNRNP70-204ENST00000595231 C8orf37Q96NL8 207 aa30.68■■■□□ 2.5
SNRNP70-204ENST00000595231 MAP3K19Q56UN5 1328 aa30.68■■■□□ 2.5
SNRNP70-204ENST00000595231 LTN1O94822 1766 aa30.67■■■□□ 2.5
SNRNP70-204ENST00000595231 MAP2P11137 1827 aaKnown RBP30.67■■■□□ 2.5
SNRNP70-204ENST00000595231 COL18A1P39060 1754 aa30.65■■■□□ 2.5
SNRNP70-204ENST00000595231 PARD3Q8TEW0 1356 aa30.65■■■□□ 2.5
SNRNP70-204ENST00000595231 COL14A1Q05707 1796 aaKnown RBP30.65■■■□□ 2.5
SNRNP70-204ENST00000595231 ZBTB7CA1YPR0 619 aa30.65■■■□□ 2.5
SNRNP70-204ENST00000595231 NGLY1Q96IV0 654 aa30.65■■■□□ 2.5
SNRNP70-204ENST00000595231 POLKQ9UBT6 870 aa30.65■■■□□ 2.5
SNRNP70-204ENST00000595231 FNBP4Q8N3X1 1017 aaPredicted RBP30.63■■■□□ 2.49
SNRNP70-204ENST00000595231 AXIN2Q9Y2T1 843 aa30.63■■■□□ 2.49
SNRNP70-204ENST00000595231 EMILIN1Q9Y6C2 1016 aa30.63■■■□□ 2.49
SNRNP70-204ENST00000595231 LMO7Q8WWI1 1683 aa30.63■■■□□ 2.49
SNRNP70-204ENST00000595231 SLIT2O94813 1529 aa30.62■■■□□ 2.49
SNRNP70-204ENST00000595231 CAMTA1Q9Y6Y1 1673 aa30.6■■■□□ 2.49
SNRNP70-204ENST00000595231 PLCH1Q4KWH8 1693 aa30.6■■■□□ 2.49
SNRNP70-204ENST00000595231 PEAK1Q9H792 1746 aa30.6■■■□□ 2.49
SNRNP70-204ENST00000595231 IP6K1Q92551 441 aa30.59■■■□□ 2.49
SNRNP70-204ENST00000595231 BTG4Q9NY30 223 aa30.59■■■□□ 2.49
SNRNP70-204ENST00000595231 AMPHP49418 695 aa30.58■■■□□ 2.49
SNRNP70-204ENST00000595231 HOXC9P31274 260 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms