RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 EDC4Q6P2E9 1401 aaKnown RBP23.91■■□□□ 1.42
AP3D1-211ENST00000591650 KRT28Q7Z3Y7 464 aa23.91■■□□□ 1.42
AP3D1-211ENST00000591650 MARF1Q9Y4F3 1742 aaKnown RBP23.91■■□□□ 1.42
AP3D1-211ENST00000591650 TNS3Q68CZ2 1445 aa23.9■■□□□ 1.42
AP3D1-211ENST00000591650 NSD3Q9BZ95 1437 aa23.9■■□□□ 1.42
AP3D1-211ENST00000591650 PSME1Q06323 249 aa23.9■■□□□ 1.42
AP3D1-211ENST00000591650 SBNO1A3KN83 1393 aa23.89■■□□□ 1.41
AP3D1-211ENST00000591650 USP54Q70EL1 1684 aa23.89■■□□□ 1.41
AP3D1-211ENST00000591650 ABCA3Q99758 1704 aa23.88■■□□□ 1.41
AP3D1-211ENST00000591650 PANK3Q9H999 370 aa23.88■■□□□ 1.41
AP3D1-211ENST00000591650 CRYBG1Q9Y4K1 1723 aa23.88■■□□□ 1.41
AP3D1-211ENST00000591650 CARD14Q9BXL6 1004 aa23.87■■□□□ 1.41
AP3D1-211ENST00000591650 SHPRHQ149N8 1683 aa23.87■■□□□ 1.41
AP3D1-211ENST00000591650 ZNF692Q9BU19 519 aaPredicted RBP23.86■■□□□ 1.41
AP3D1-211ENST00000591650 BRD4O60885 1362 aaPredicted RBP23.86■■□□□ 1.41
AP3D1-211ENST00000591650 COL22A1Q8NFW1 1626 aaPredicted RBP23.85■■□□□ 1.41
AP3D1-211ENST00000591650 ANKRD26Q9UPS8 1709 aa23.85■■□□□ 1.41
AP3D1-211ENST00000591650 TTC21BQ7Z4L5 1316 aa23.85■■□□□ 1.41
AP3D1-211ENST00000591650 MED1Q15648 1581 aaPredicted RBP23.84■■□□□ 1.41
AP3D1-211ENST00000591650 SPATA31A3Q5VYP0 1347 aa23.84■■□□□ 1.41
AP3D1-211ENST00000591650 PHRF1Q9P1Y6 1649 aaKnown RBP23.83■■□□□ 1.41
AP3D1-211ENST00000591650 PAK3O75914 559 aaPredicted RBP23.83■■□□□ 1.4
AP3D1-211ENST00000591650 LRRC59Q96AG4 307 aaKnown RBP23.83■■□□□ 1.4
AP3D1-211ENST00000591650 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.82■■□□□ 1.4
AP3D1-211ENST00000591650 DDX10Q13206 875 aaKnown RBP23.81■■□□□ 1.4
AP3D1-211ENST00000591650 TTC21AQ8NDW8 1320 aa23.81■■□□□ 1.4
AP3D1-211ENST00000591650 PNPLA6Q8IY17 1366 aa23.8■■□□□ 1.4
AP3D1-211ENST00000591650 ARHGEF10O15013 1369 aa23.79■■□□□ 1.4
AP3D1-211ENST00000591650 NME9Q86XW9 330 aa23.79■■□□□ 1.4
AP3D1-211ENST00000591650 JCADQ9P266 1359 aa23.79■■□□□ 1.4
AP3D1-211ENST00000591650 OVOS2A0A0J9YW53 1432 aa23.78■■□□□ 1.4
AP3D1-211ENST00000591650 OVOS2Q6IE36 1432 aa23.78■■□□□ 1.4
AP3D1-211ENST00000591650 LMOD2Q6P5Q4 547 aa23.77■■□□□ 1.4
AP3D1-211ENST00000591650 NUTM2GQ5VZR2 741 aa23.76■■□□□ 1.39
AP3D1-211ENST00000591650 SLIT3O75094 1523 aa23.76■■□□□ 1.39
AP3D1-211ENST00000591650 PER1O15534 1290 aaPredicted RBP23.76■■□□□ 1.39
AP3D1-211ENST00000591650 ZRANB1Q9UGI0 708 aa23.76■■□□□ 1.39
AP3D1-211ENST00000591650 ABTB2Q8N961 1025 aa23.75■■□□□ 1.39
AP3D1-211ENST00000591650 KNSTRNQ9Y448 316 aa23.74■■□□□ 1.39
AP3D1-211ENST00000591650 CGNL1Q0VF96 1302 aa23.74■■□□□ 1.39
AP3D1-211ENST00000591650 USP31Q70CQ4 1352 aa23.74■■□□□ 1.39
AP3D1-211ENST00000591650 USP19O94966 1318 aa23.72■■□□□ 1.39
AP3D1-211ENST00000591650 FYB1O15117 783 aa23.72■■□□□ 1.39
AP3D1-211ENST00000591650 AMER1Q5JTC6 1135 aaPredicted RBP23.72■■□□□ 1.39
AP3D1-211ENST00000591650 GGNBP2Q9H3C7 697 aa23.72■■□□□ 1.39
AP3D1-211ENST00000591650 NFAT5O94916 1531 aa23.71■■□□□ 1.39
AP3D1-211ENST00000591650 PLEKHG5O94827 1062 aa23.71■■□□□ 1.39
AP3D1-211ENST00000591650 NSD2O96028 1365 aa23.7■■□□□ 1.39
AP3D1-211ENST00000591650 NLRP6P59044 892 aa23.7■■□□□ 1.38
AP3D1-211ENST00000591650 LTN1O94822 1766 aa23.69■■□□□ 1.38
AP3D1-211ENST00000591650 CABLES1Q8TDN4 633 aa23.68■■□□□ 1.38
AP3D1-211ENST00000591650 LRP6O75581 1613 aa23.68■■□□□ 1.38
AP3D1-211ENST00000591650 NPC1L1Q9UHC9 1359 aa23.67■■□□□ 1.38
AP3D1-211ENST00000591650 SPATA31A6Q5VVP1 1343 aa23.67■■□□□ 1.38
AP3D1-211ENST00000591650 NLRP13Q86W25 1043 aa23.67■■□□□ 1.38
AP3D1-211ENST00000591650 NUTM2BA6NNL0 878 aaPredicted RBP23.66■■□□□ 1.38
AP3D1-211ENST00000591650 NUTM2EB1AL46 878 aaPredicted RBP23.66■■□□□ 1.38
AP3D1-211ENST00000591650 NUTM2AQ8IVF1 878 aaPredicted RBP23.66■■□□□ 1.38
AP3D1-211ENST00000591650 CC2D1BQ5T0F9 858 aaKnown RBP23.65■■□□□ 1.38
AP3D1-211ENST00000591650 COG3Q96JB2 828 aa23.65■■□□□ 1.38
AP3D1-211ENST00000591650 CNGB1Q14028 1251 aaPredicted RBP23.64■■□□□ 1.37
AP3D1-211ENST00000591650 MAP2P11137 1827 aaKnown RBP23.62■■□□□ 1.37
AP3D1-211ENST00000591650 SOX12O15370 315 aa23.61■■□□□ 1.37
AP3D1-211ENST00000591650 PLCH1Q4KWH8 1693 aa23.61■■□□□ 1.37
AP3D1-211ENST00000591650 PEAK1Q9H792 1746 aa23.6■■□□□ 1.37
AP3D1-211ENST00000591650 GCP02774 474 aa23.59■■□□□ 1.37
AP3D1-211ENST00000591650 COL18A1P39060 1754 aa23.58■■□□□ 1.37
AP3D1-211ENST00000591650 LMO7Q8WWI1 1683 aa23.58■■□□□ 1.37
AP3D1-211ENST00000591650 ADAMTS2O95450 1211 aa23.58■■□□□ 1.36
AP3D1-211ENST00000591650 HAP1P54257 671 aaPredicted RBP23.58■■□□□ 1.36
AP3D1-211ENST00000591650 MORC1Q86VD1 984 aa23.58■■□□□ 1.36
AP3D1-211ENST00000591650 COL14A1Q05707 1796 aaKnown RBP23.57■■□□□ 1.36
AP3D1-211ENST00000591650 PARD3Q8TEW0 1356 aa23.57■■□□□ 1.36
AP3D1-211ENST00000591650 RGPD5Q99666 1765 aa23.57■■□□□ 1.36
AP3D1-211ENST00000591650 FBLN1P23142 703 aa23.57■■□□□ 1.36
AP3D1-211ENST00000591650 KIAA0232Q92628 1395 aa23.56■■□□□ 1.36
AP3D1-211ENST00000591650 TNNT2P45379 298 aaPredicted RBP23.56■■□□□ 1.36
AP3D1-211ENST00000591650 KCNH5Q8NCM2 988 aa23.56■■□□□ 1.36
AP3D1-211ENST00000591650 CPDO75976 1380 aa23.55■■□□□ 1.36
AP3D1-211ENST00000591650 ZC3H6P61129 1189 aaKnown RBP23.54■■□□□ 1.36
AP3D1-211ENST00000591650 AATKQ6ZMQ8 1374 aa23.54■■□□□ 1.36
AP3D1-211ENST00000591650 ABCC6O95255 1503 aa23.53■■□□□ 1.36
AP3D1-211ENST00000591650 NRAPQ86VF7 1730 aa23.53■■□□□ 1.36
AP3D1-211ENST00000591650 SMG6Q86US8 1419 aaKnown RBP23.53■■□□□ 1.36
AP3D1-211ENST00000591650 NWD2Q9ULI1 1742 aa23.52■■□□□ 1.36
AP3D1-211ENST00000591650 RRS1Q15050 365 aaKnown RBP23.51■■□□□ 1.35
AP3D1-211ENST00000591650 MEX3CQ5U5Q3 659 aaKnown RBP23.51■■□□□ 1.35
AP3D1-211ENST00000591650 ZBTB7CA1YPR0 619 aa23.5■■□□□ 1.35
AP3D1-211ENST00000591650 ARHGEF25Q86VW2 580 aa23.5■■□□□ 1.35
AP3D1-211ENST00000591650 MAP3K19Q56UN5 1328 aa23.5■■□□□ 1.35
AP3D1-211ENST00000591650 C8orf37Q96NL8 207 aa23.5■■□□□ 1.35
AP3D1-211ENST00000591650 PRDM11Q9NQV5 511 aa23.5■■□□□ 1.35
AP3D1-211ENST00000591650 CHRNA2Q15822 529 aa23.49■■□□□ 1.35
AP3D1-211ENST00000591650 EMILIN1Q9Y6C2 1016 aa23.49■■□□□ 1.35
AP3D1-211ENST00000591650 RTL1A6NKG5 1358 aa23.48■■□□□ 1.35
AP3D1-211ENST00000591650 FAM83GA6ND36 823 aa23.48■■□□□ 1.35
AP3D1-211ENST00000591650 CAMTA1Q9Y6Y1 1673 aa23.48■■□□□ 1.35
AP3D1-211ENST00000591650 CDK12Q9NYV4 1490 aaPredicted RBP23.47■■□□□ 1.35
AP3D1-211ENST00000591650 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.47■■□□□ 1.35
AP3D1-211ENST00000591650 PRKRIP1Q9H875 184 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms