RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TPM2P07951 284 aa16.14■□□□□ 0.17
SMARCA4-216ENST00000591545 SETQ01105 290 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-216ENST00000591545 TPD52L1Q16890 204 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-216ENST00000591545 NUCB2P80303 420 aa16.14■□□□□ 0.17
SMARCA4-216ENST00000591545 XPCQ01831 940 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-216ENST00000591545 SULT6B1Q6IMI4 303 aa16.14■□□□□ 0.17
SMARCA4-216ENST00000591545 RNF20Q5VTR2 975 aa16.13■□□□□ 0.17
SMARCA4-216ENST00000591545 PLIN1O60240 522 aa16.13■□□□□ 0.17
SMARCA4-216ENST00000591545 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-216ENST00000591545 NUDT16Q96DE0 195 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-216ENST00000591545 ERICH2A1L162 156 aa16.12■□□□□ 0.17
SMARCA4-216ENST00000591545 ZC3H6P61129 1189 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-216ENST00000591545 FOXD4L5Q5VV16 416 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-216ENST00000591545 FOXD4L4Q8WXT5 416 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-216ENST00000591545 CNTLNQ9NXG0 1405 aa16.12■□□□□ 0.17
SMARCA4-216ENST00000591545 CEBPAP49715 358 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-216ENST00000591545 GNAI3P08754 354 aa16.11■□□□□ 0.17
SMARCA4-216ENST00000591545 TCP11L2Q8N4U5 519 aa16.11■□□□□ 0.17
SMARCA4-216ENST00000591545 TRIM29Q14134 588 aa16.11■□□□□ 0.17
SMARCA4-216ENST00000591545 CCDC27Q2M243 656 aa16.11■□□□□ 0.17
SMARCA4-216ENST00000591545 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-216ENST00000591545 KIF14Q15058 1648 aa16.1■□□□□ 0.17
SMARCA4-216ENST00000591545 CPLX1O14810 134 aa16.1■□□□□ 0.17
SMARCA4-216ENST00000591545 SLC4A3P48751 1232 aa16.1■□□□□ 0.17
SMARCA4-216ENST00000591545 PTPN23Q9H3S7 1636 aa16.09■□□□□ 0.17
SMARCA4-216ENST00000591545 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
SMARCA4-216ENST00000591545 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
SMARCA4-216ENST00000591545 INTS3Q68E01 1043 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-216ENST00000591545 BRD4O60885 1362 aaPredicted RBP16.08■□□□□ 0.17
SMARCA4-216ENST00000591545 HOOK1Q9UJC3 728 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-216ENST00000591545 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
SMARCA4-216ENST00000591545 AMOTL2Q9Y2J4 779 aa16.08■□□□□ 0.16
SMARCA4-216ENST00000591545 WASHC4Q2M389 1173 aa16.08■□□□□ 0.16
SMARCA4-216ENST00000591545 HDGFL1Q5TGJ6 251 aa16.08■□□□□ 0.16
SMARCA4-216ENST00000591545 ANO8Q9HCE9 1232 aaPredicted RBP16.08■□□□□ 0.16
SMARCA4-216ENST00000591545 ANKRD20A12PQ8NF67 263 aa16.08■□□□□ 0.16
SMARCA4-216ENST00000591545 TEX14Q8IWB6 1497 aa16.08■□□□□ 0.16
SMARCA4-216ENST00000591545 IPO7O95373 1038 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-216ENST00000591545 NFXL1Q6ZNB6 911 aa16.07■□□□□ 0.16
SMARCA4-216ENST00000591545 FANCAO15360 1455 aa16.07■□□□□ 0.16
SMARCA4-216ENST00000591545 CCDC47Q96A33 483 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-216ENST00000591545 PHF8Q9UPP1 1060 aa16.07■□□□□ 0.16
SMARCA4-216ENST00000591545 NGLY1Q96IV0 654 aa16.06■□□□□ 0.16
SMARCA4-216ENST00000591545 LRPPRCP42704 1394 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-216ENST00000591545 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
SMARCA4-216ENST00000591545 GNL3LQ9NVN8 582 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-216ENST00000591545 ANO2Q9NQ90 1003 aa16.06■□□□□ 0.16
SMARCA4-216ENST00000591545 ADAMTS8Q9UP79 889 aa16.06■□□□□ 0.16
SMARCA4-216ENST00000591545 TEX35Q5T0J7 233 aa16.06■□□□□ 0.16
SMARCA4-216ENST00000591545 FBXO31Q5XUX0 539 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-216ENST00000591545 CLASRPQ8N2M8 674 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-216ENST00000591545 PES1O00541 588 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-216ENST00000591545 RALYLQ86SE5 291 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-216ENST00000591545 ADAMTS2O95450 1211 aa16.05■□□□□ 0.16
SMARCA4-216ENST00000591545 TWISTNBQ3B726 338 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-216ENST00000591545 SAMD1Q6SPF0 538 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-216ENST00000591545 CNNM1Q9NRU3 951 aa16.05■□□□□ 0.16
SMARCA4-216ENST00000591545 FYB1O15117 783 aa16.04■□□□□ 0.16
SMARCA4-216ENST00000591545 CADPS2Q86UW7 1296 aa16.04■□□□□ 0.16
SMARCA4-216ENST00000591545 CAMSAP2Q08AD1 1489 aa16.04■□□□□ 0.16
SMARCA4-216ENST00000591545 MCTP1Q6DN14 999 aa16.03■□□□□ 0.16
SMARCA4-216ENST00000591545 FAM43AQ8N2R8 423 aa16.03■□□□□ 0.16
SMARCA4-216ENST00000591545 IDI1Q13907 227 aa16.03■□□□□ 0.16
SMARCA4-216ENST00000591545 WAPLQ7Z5K2 1190 aa16.03■□□□□ 0.16
SMARCA4-216ENST00000591545 CCAR2Q8N163 923 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-216ENST00000591545 MRE11P49959 708 aa16.03■□□□□ 0.16
SMARCA4-216ENST00000591545 MTERF4Q7Z6M4 381 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-216ENST00000591545 CCDC43Q96MW1 224 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-216ENST00000591545 C22orf23Q9BZE7 217 aa16.02■□□□□ 0.16
SMARCA4-216ENST00000591545 FOXO3O43524 673 aa16.02■□□□□ 0.15
SMARCA4-216ENST00000591545 TOM1O60784 492 aa16.02■□□□□ 0.15
SMARCA4-216ENST00000591545 RRS1Q15050 365 aaKnown RBP16.02■□□□□ 0.15
SMARCA4-216ENST00000591545 ZNF771Q7L3S4 317 aaPredicted RBP16.02■□□□□ 0.15
SMARCA4-216ENST00000591545 VSIG10Q8N0Z9 540 aa16.02■□□□□ 0.15
SMARCA4-216ENST00000591545 BICD2Q8TD16 824 aa16.02■□□□□ 0.15
SMARCA4-216ENST00000591545 SMC3Q9UQE7 1217 aa16.02■□□□□ 0.15
SMARCA4-216ENST00000591545 SURF6O75683 361 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-216ENST00000591545 STARD3NLO95772 234 aa16.01■□□□□ 0.15
SMARCA4-216ENST00000591545 ERC1Q8IUD2 1116 aa16.01■□□□□ 0.15
SMARCA4-216ENST00000591545 MAP7D2Q96T17 732 aa16.01■□□□□ 0.15
SMARCA4-216ENST00000591545 CCAR1Q8IX12 1150 aaKnown RBP16■□□□□ 0.15
SMARCA4-216ENST00000591545 SASS6Q6UVJ0 657 aa16■□□□□ 0.15
SMARCA4-216ENST00000591545 ARGLU1Q9NWB6 273 aaPredicted RBP16■□□□□ 0.15
SMARCA4-216ENST00000591545 TNRQ92752 1358 aa16■□□□□ 0.15
SMARCA4-216ENST00000591545 CDC45O75419 566 aa15.99■□□□□ 0.15
SMARCA4-216ENST00000591545 MPHOSPH8Q99549 860 aa15.99■□□□□ 0.15
SMARCA4-216ENST00000591545 SLC3A2P08195 630 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-216ENST00000591545 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-216ENST00000591545 BTBD11A6QL63 1104 aa15.99■□□□□ 0.15
SMARCA4-216ENST00000591545 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
SMARCA4-216ENST00000591545 IKQ13123 557 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-216ENST00000591545 ZNF592Q92610 1267 aa15.99■□□□□ 0.15
SMARCA4-216ENST00000591545 ACBD3Q9H3P7 528 aa15.99■□□□□ 0.15
SMARCA4-216ENST00000591545 CCDC39Q9UFE4 941 aa15.99■□□□□ 0.15
SMARCA4-216ENST00000591545 MAPKBP1O60336 1514 aa15.99■□□□□ 0.15
SMARCA4-216ENST00000591545 NINLQ9Y2I6 1382 aa15.99■□□□□ 0.15
SMARCA4-216ENST00000591545 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
SMARCA4-216ENST00000591545 CCDC158Q5M9N0 1113 aa15.98■□□□□ 0.15
SMARCA4-216ENST00000591545 CCDC73Q6ZRK6 1079 aa15.98■□□□□ 0.15
SMARCA4-216ENST00000591545 DHX29Q7Z478 1369 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms