RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 SLC12A5Q9H2X9 1139 aa13.31□□□□□ -0.28
PTPN2-210ENST00000591115 NSD3Q9BZ95 1437 aa13.31□□□□□ -0.28
PTPN2-210ENST00000591115 NUDT16Q96DE0 195 aaKnown RBP13.31□□□□□ -0.28
PTPN2-210ENST00000591115 CD163L1Q9NR16 1453 aa13.31□□□□□ -0.28
PTPN2-210ENST00000591115 KIF1AQ12756 1690 aa13.31□□□□□ -0.28
PTPN2-210ENST00000591115 NRKQ7Z2Y5 1582 aa13.3□□□□□ -0.28
PTPN2-210ENST00000591115 C1orf167Q5SNV9 1468 aa13.3□□□□□ -0.28
PTPN2-210ENST00000591115 ATF3P18847 181 aa13.3□□□□□ -0.28
PTPN2-210ENST00000591115 CGNL1Q0VF96 1302 aa13.3□□□□□ -0.28
PTPN2-210ENST00000591115 PDE3BQ13370 1112 aa13.29□□□□□ -0.28
PTPN2-210ENST00000591115 FKBP8Q14318 412 aa13.29□□□□□ -0.28
PTPN2-210ENST00000591115 ERICH6BQ5W0A0 696 aa13.28□□□□□ -0.28
PTPN2-210ENST00000591115 NUDCQ9Y266 331 aa13.28□□□□□ -0.28
PTPN2-210ENST00000591115 A0A1W2PP64 1363 aa13.28□□□□□ -0.28
PTPN2-210ENST00000591115 CADPS2Q86UW7 1296 aa13.28□□□□□ -0.28
PTPN2-210ENST00000591115 KIF20BQ96Q89 1820 aa13.27□□□□□ -0.28
PTPN2-210ENST00000591115 ROBO1Q9Y6N7 1651 aa13.27□□□□□ -0.29
PTPN2-210ENST00000591115 WDR43Q15061 677 aaKnown RBP eCLIP13.27□□□□□ -0.29
PTPN2-210ENST00000591115 TERF2IPQ9NYB0 399 aa13.27□□□□□ -0.29
PTPN2-210ENST00000591115 CABP1Q9NZU7 370 aa13.27□□□□□ -0.29
PTPN2-210ENST00000591115 POLR3AO14802 1390 aaPredicted RBP13.26□□□□□ -0.29
PTPN2-210ENST00000591115 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
PTPN2-210ENST00000591115 IQSEC2Q5JU85 1478 aa13.26□□□□□ -0.29
PTPN2-210ENST00000591115 MORC1Q86VD1 984 aa13.25□□□□□ -0.29
PTPN2-210ENST00000591115 PMFBP1Q8TBY8 1022 aa13.25□□□□□ -0.29
PTPN2-210ENST00000591115 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
PTPN2-210ENST00000591115 NHSL1Q5SYE7 1610 aa13.25□□□□□ -0.29
PTPN2-210ENST00000591115 ESCO1Q5FWF5 840 aa13.24□□□□□ -0.29
PTPN2-210ENST00000591115 CPSF1Q10570 1443 aaKnown RBP13.24□□□□□ -0.29
PTPN2-210ENST00000591115 TRPM3Q9HCF6 1732 aaPredicted RBP13.24□□□□□ -0.29
PTPN2-210ENST00000591115 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
PTPN2-210ENST00000591115 ADAMTS8Q9UP79 889 aa13.24□□□□□ -0.29
PTPN2-210ENST00000591115 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
PTPN2-210ENST00000591115 ANKRD26Q9UPS8 1709 aa13.23□□□□□ -0.29
PTPN2-210ENST00000591115 ACEP12821 1306 aa13.23□□□□□ -0.29
PTPN2-210ENST00000591115 PIK3C2AO00443 1686 aa13.22□□□□□ -0.29
PTPN2-210ENST00000591115 NGEFQ8N5V2 710 aa13.22□□□□□ -0.29
PTPN2-210ENST00000591115 CERKQ8TCT0 537 aa13.22□□□□□ -0.29
PTPN2-210ENST00000591115 SLAIN2Q9P270 581 aa13.22□□□□□ -0.29
PTPN2-210ENST00000591115 PHF8Q9UPP1 1060 aa13.22□□□□□ -0.29
PTPN2-210ENST00000591115 USP6P35125 1406 aa13.22□□□□□ -0.29
PTPN2-210ENST00000591115 PLEKHG3A1L390 1219 aa13.21□□□□□ -0.29
PTPN2-210ENST00000591115 RNF123Q5XPI4 1314 aa13.21□□□□□ -0.29
PTPN2-210ENST00000591115 MARF1Q9Y4F3 1742 aaKnown RBP13.21□□□□□ -0.29
PTPN2-210ENST00000591115 BRINP3Q76B58 766 aa13.21□□□□□ -0.3
PTPN2-210ENST00000591115 PXDNQ92626 1479 aa13.2□□□□□ -0.3
PTPN2-210ENST00000591115 EDC4Q6P2E9 1401 aaKnown RBP13.2□□□□□ -0.3
PTPN2-210ENST00000591115 NGDNQ8NEJ9 315 aaKnown RBP13.2□□□□□ -0.3
PTPN2-210ENST00000591115 DDX17Q92841 729 aaKnown RBP13.2□□□□□ -0.3
PTPN2-210ENST00000591115 ALS2Q96Q42 1657 aa13.19□□□□□ -0.3
PTPN2-210ENST00000591115 XPCQ01831 940 aaPredicted RBP13.19□□□□□ -0.3
PTPN2-210ENST00000591115 PHLPP1O60346 1717 aa13.18□□□□□ -0.3
PTPN2-210ENST00000591115 FOXO3O43524 673 aa13.18□□□□□ -0.3
PTPN2-210ENST00000591115 CFAP53Q96M91 514 aa13.18□□□□□ -0.3
PTPN2-210ENST00000591115 AHDC1Q5TGY3 1603 aaPredicted RBP13.18□□□□□ -0.3
PTPN2-210ENST00000591115 SSH2Q76I76 1423 aa13.18□□□□□ -0.3
PTPN2-210ENST00000591115 UBAP1LF5GYI3 381 aa13.17□□□□□ -0.3
PTPN2-210ENST00000591115 USP54Q70EL1 1684 aa13.17□□□□□ -0.3
PTPN2-210ENST00000591115 PIP4K2BP78356 416 aa13.17□□□□□ -0.3
PTPN2-210ENST00000591115 COL16A1Q07092 1604 aaPredicted RBP13.16□□□□□ -0.3
PTPN2-210ENST00000591115 FYB1O15117 783 aa13.16□□□□□ -0.3
PTPN2-210ENST00000591115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.16□□□□□ -0.31e-6■□□□□ 10.9
PTPN2-210ENST00000591115 ZNF521Q96K83 1311 aa13.15□□□□□ -0.3
PTPN2-210ENST00000591115 TOM1O60784 492 aa13.15□□□□□ -0.3
PTPN2-210ENST00000591115 MTHFSP49914 203 aa13.15□□□□□ -0.3
PTPN2-210ENST00000591115 ABCA3Q99758 1704 aa13.15□□□□□ -0.3
PTPN2-210ENST00000591115 CRYBG1Q9Y4K1 1723 aa13.15□□□□□ -0.3
PTPN2-210ENST00000591115 SHPRHQ149N8 1683 aa13.15□□□□□ -0.31
PTPN2-210ENST00000591115 NPHP3Q7Z494 1330 aa13.14□□□□□ -0.31
PTPN2-210ENST00000591115 PSME1Q06323 249 aa13.14□□□□□ -0.31
PTPN2-210ENST00000591115 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
PTPN2-210ENST00000591115 POTEHQ6S545 545 aa13.13□□□□□ -0.31
PTPN2-210ENST00000591115 NME9Q86XW9 330 aa13.13□□□□□ -0.31
PTPN2-210ENST00000591115 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
PTPN2-210ENST00000591115 PHRF1Q9P1Y6 1649 aaKnown RBP13.13□□□□□ -0.31
PTPN2-210ENST00000591115 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
PTPN2-210ENST00000591115 TNS3Q68CZ2 1445 aa13.13□□□□□ -0.31
PTPN2-210ENST00000591115 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
PTPN2-210ENST00000591115 SALL2Q9Y467 1007 aaPredicted RBP13.13□□□□□ -0.31
PTPN2-210ENST00000591115 OVOS2A0A0J9YW53 1432 aa13.12□□□□□ -0.31
PTPN2-210ENST00000591115 OVOS2Q6IE36 1432 aa13.12□□□□□ -0.31
PTPN2-210ENST00000591115 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
PTPN2-210ENST00000591115 TNNT2P45379 298 aaPredicted RBP13.12□□□□□ -0.31
PTPN2-210ENST00000591115 KRT28Q7Z3Y7 464 aa13.12□□□□□ -0.31
PTPN2-210ENST00000591115 GGNBP2Q9H3C7 697 aa13.12□□□□□ -0.31
PTPN2-210ENST00000591115 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
PTPN2-210ENST00000591115 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
PTPN2-210ENST00000591115 RCAN3Q9UKA8 241 aa13.11□□□□□ -0.31
PTPN2-210ENST00000591115 TTC21AQ8NDW8 1320 aa13.11□□□□□ -0.31
PTPN2-210ENST00000591115 MED1Q15648 1581 aaPredicted RBP13.1□□□□□ -0.31
PTPN2-210ENST00000591115 SENP3-EIF4A1A0A087X0R7 540 aa13.1□□□□□ -0.31
PTPN2-210ENST00000591115 APAF1O14727 1248 aa13.1□□□□□ -0.31
PTPN2-210ENST00000591115 RUNDC1Q96C34 613 aa13.1□□□□□ -0.31
PTPN2-210ENST00000591115 CDCA7LQ96GN5 454 aa13.1□□□□□ -0.31
PTPN2-210ENST00000591115 SOS2Q07890 1332 aaPredicted RBP13.1□□□□□ -0.31
PTPN2-210ENST00000591115 LTN1O94822 1766 aa13.1□□□□□ -0.31
PTPN2-210ENST00000591115 SBNO1A3KN83 1393 aa13.1□□□□□ -0.31
PTPN2-210ENST00000591115 PNPLA6Q8IY17 1366 aa13.1□□□□□ -0.31
PTPN2-210ENST00000591115 NUTM2GQ5VZR2 741 aa13.1□□□□□ -0.31
PTPN2-210ENST00000591115 COL3A1P02461 1466 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms