RNA–Protein interactions for RNA: ENST00000590810.5

TCF4-247, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-247ENST00000590810 SIRT1Q96EB6 747 aa12.25□□□□□ -0.45
TCF4-247ENST00000590810 PRR36Q9H6K5 1346 aa12.25□□□□□ -0.45
TCF4-247ENST00000590810 FAM98CQ17RN3 349 aaKnown RBP12.24□□□□□ -0.45
TCF4-247ENST00000590810 GPRASP1Q5JY77 1395 aa12.24□□□□□ -0.45
TCF4-247ENST00000590810 FAM182BQ5T319 152 aa12.24□□□□□ -0.45
TCF4-247ENST00000590810 KRT27Q7Z3Y8 459 aa12.24□□□□□ -0.45
TCF4-247ENST00000590810 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
TCF4-247ENST00000590810 PHRF1Q9P1Y6 1649 aaKnown RBP12.23□□□□□ -0.45
TCF4-247ENST00000590810 RGPD1P0DJD0 1748 aa12.23□□□□□ -0.45
TCF4-247ENST00000590810 PSDA5PKW4 1024 aaPredicted RBP12.22□□□□□ -0.45
TCF4-247ENST00000590810 NGDNQ8NEJ9 315 aaKnown RBP12.22□□□□□ -0.45
TCF4-247ENST00000590810 EIF3AQ14152 1382 aaKnown RBP12.21□□□□□ -0.45
TCF4-247ENST00000590810 NUTM2GQ5VZR2 741 aa12.21□□□□□ -0.45
TCF4-247ENST00000590810 ATP7BP35670 1465 aa12.21□□□□□ -0.46
TCF4-247ENST00000590810 TNS1Q9HBL0 1735 aaKnown RBP12.2□□□□□ -0.46
TCF4-247ENST00000590810 TOPAZ1Q8N9V7 1692 aa12.2□□□□□ -0.46
TCF4-247ENST00000590810 WASLO00401 505 aaPredicted RBP12.2□□□□□ -0.46
TCF4-247ENST00000590810 PRDM11Q9NQV5 511 aa12.2□□□□□ -0.46
TCF4-247ENST00000590810 THSD7AQ9UPZ6 1657 aa12.19□□□□□ -0.46
TCF4-247ENST00000590810 CHRNA2Q15822 529 aa12.19□□□□□ -0.46
TCF4-247ENST00000590810 STRN4Q9NRL3 753 aa12.19□□□□□ -0.46
TCF4-247ENST00000590810 LRP5O75197 1615 aa12.19□□□□□ -0.46
TCF4-247ENST00000590810 KIAA0232Q92628 1395 aa12.18□□□□□ -0.46
TCF4-247ENST00000590810 BAG6P46379 1132 aa12.17□□□□□ -0.46
TCF4-247ENST00000590810 CCER1Q8TC90 406 aaPredicted RBP12.17□□□□□ -0.46
TCF4-247ENST00000590810 USP35Q9P2H5 1018 aa12.17□□□□□ -0.46
TCF4-247ENST00000590810 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
TCF4-247ENST00000590810 ZC3H6P61129 1189 aaKnown RBP12.16□□□□□ -0.46
TCF4-247ENST00000590810 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
TCF4-247ENST00000590810 NUDT16Q96DE0 195 aaKnown RBP12.16□□□□□ -0.46
TCF4-247ENST00000590810 NRKQ7Z2Y5 1582 aa12.16□□□□□ -0.46
TCF4-247ENST00000590810 SPATA31A5Q5VU36 1347 aa12.15□□□□□ -0.46
TCF4-247ENST00000590810 SPATA31A7Q8IWB4 1347 aa12.15□□□□□ -0.46
TCF4-247ENST00000590810 QRICH2Q9H0J4 1663 aa12.15□□□□□ -0.46
TCF4-247ENST00000590810 CDK19Q9BWU1 502 aa12.14□□□□□ -0.47
TCF4-247ENST00000590810 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
TCF4-247ENST00000590810 ZBTB7CA1YPR0 619 aa12.13□□□□□ -0.47
TCF4-247ENST00000590810 NEUROD1Q13562 356 aa12.13□□□□□ -0.47
TCF4-247ENST00000590810 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
TCF4-247ENST00000590810 SIN3AQ96ST3 1273 aa12.12□□□□□ -0.47
TCF4-247ENST00000590810 ACEP12821 1306 aa12.11□□□□□ -0.47
TCF4-247ENST00000590810 SPATA31A1Q5TZJ5 1347 aa12.11□□□□□ -0.47
TCF4-247ENST00000590810 TRIM37O94972 964 aa12.11□□□□□ -0.47
TCF4-247ENST00000590810 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
TCF4-247ENST00000590810 EVA1CP58658 441 aa12.1□□□□□ -0.47
TCF4-247ENST00000590810 SRPK2P78362 688 aaKnown RBP12.1□□□□□ -0.47
TCF4-247ENST00000590810 EZH2Q15910 746 aaKnown RBP12.1□□□□□ -0.47
TCF4-247ENST00000590810 NBPF1Q3BBV0 1214 aa12.1□□□□□ -0.47
TCF4-247ENST00000590810 ABTB2Q8N961 1025 aa12.1□□□□□ -0.47
TCF4-247ENST00000590810 NUP188Q5SRE5 1749 aa12.1□□□□□ -0.47
TCF4-247ENST00000590810 PPIP5K1Q6PFW1 1433 aa12.1□□□□□ -0.47
TCF4-247ENST00000590810 LMO7Q8WWI1 1683 aa12.1□□□□□ -0.47
TCF4-247ENST00000590810 CAMTA1Q9Y6Y1 1673 aa12.1□□□□□ -0.47
TCF4-247ENST00000590810 NBPF8Q3BBV2 869 aa12.09□□□□□ -0.47
TCF4-247ENST00000590810 RREB1Q92766 1687 aa12.09□□□□□ -0.47
TCF4-247ENST00000590810 POLR3AO14802 1390 aaPredicted RBP12.08□□□□□ -0.48
TCF4-247ENST00000590810 LARP1Q6PKG0 1096 aaKnown RBP12.08□□□□□ -0.48
TCF4-247ENST00000590810 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
TCF4-247ENST00000590810 APBA3O96018 575 aa12.07□□□□□ -0.48
TCF4-247ENST00000590810 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
TCF4-247ENST00000590810 CLSPNQ9HAW4 1339 aa12.07□□□□□ -0.48
TCF4-247ENST00000590810 PARP4Q9UKK3 1724 aaKnown RBP12.06□□□□□ -0.48
TCF4-247ENST00000590810 DISP2A7MBM2 1401 aa12.06□□□□□ -0.48
TCF4-247ENST00000590810 RGPD5Q99666 1765 aa12.06□□□□□ -0.48
TCF4-247ENST00000590810 PDE3BQ13370 1112 aa12.06□□□□□ -0.48
TCF4-247ENST00000590810 FAM196AQ6ZSG2 479 aa12.06□□□□□ -0.48
TCF4-247ENST00000590810 STAC3Q96MF2 364 aa12.06□□□□□ -0.48
TCF4-247ENST00000590810 WNK3Q9BYP7 1800 aa12.06□□□□□ -0.48
TCF4-247ENST00000590810 PIK3C2AO00443 1686 aa12.06□□□□□ -0.48
TCF4-247ENST00000590810 CENPJQ9HC77 1338 aaPredicted RBP12.06□□□□□ -0.48
TCF4-247ENST00000590810 LRRC37A3O60309 1634 aa12.05□□□□□ -0.48
TCF4-247ENST00000590810 COL5A2P05997 1499 aaPredicted RBP12.05□□□□□ -0.48
TCF4-247ENST00000590810 SOX12O15370 315 aa12.04□□□□□ -0.48
TCF4-247ENST00000590810 USP19O94966 1318 aa12.04□□□□□ -0.48
TCF4-247ENST00000590810 SBF2Q86WG5 1849 aa12.04□□□□□ -0.48
TCF4-247ENST00000590810 AKAP12Q02952 1782 aa12.03□□□□□ -0.48
TCF4-247ENST00000590810 PLEKHG3A1L390 1219 aa12.03□□□□□ -0.48
TCF4-247ENST00000590810 TCP11L2Q8N4U5 519 aa12.03□□□□□ -0.48
TCF4-247ENST00000590810 CAMKK2Q96RR4 588 aa12.03□□□□□ -0.48
TCF4-247ENST00000590810 TRPM1Q7Z4N2 1603 aa12.03□□□□□ -0.48
TCF4-247ENST00000590810 CPDO75976 1380 aa12.03□□□□□ -0.48
TCF4-247ENST00000590810 GCP02774 474 aa12.02□□□□□ -0.49
TCF4-247ENST00000590810 BARGINQ6ZT62 677 aa12.02□□□□□ -0.49
TCF4-247ENST00000590810 NLRP13Q86W25 1043 aa12.02□□□□□ -0.49
TCF4-247ENST00000590810 L3MBTL2Q969R5 705 aa12.02□□□□□ -0.49
TCF4-247ENST00000590810 CABP1Q9NZU7 370 aa12.02□□□□□ -0.49
TCF4-247ENST00000590810 USP6P35125 1406 aa12.02□□□□□ -0.49
TCF4-247ENST00000590810 PEAK1Q9H792 1746 aa12.01□□□□□ -0.49
TCF4-247ENST00000590810 NLRP6P59044 892 aa12.01□□□□□ -0.49
TCF4-247ENST00000590810 TONSLQ96HA7 1378 aa12.01□□□□□ -0.49
TCF4-247ENST00000590810 CRB1P82279 1406 aa12.01□□□□□ -0.49
TCF4-247ENST00000590810 SLIT3O75094 1523 aa12.01□□□□□ -0.49
TCF4-247ENST00000590810 COL18A1P39060 1754 aa12□□□□□ -0.49
TCF4-247ENST00000590810 TOM1L2Q6ZVM7 507 aa11.99□□□□□ -0.49
TCF4-247ENST00000590810 PARD3Q8TEW0 1356 aa11.99□□□□□ -0.49
TCF4-247ENST00000590810 OVOS2A0A0G2JMS6 1433 aa11.99□□□□□ -0.49
TCF4-247ENST00000590810 OVOS2A0A0J9YW53 1432 aa11.99□□□□□ -0.49
TCF4-247ENST00000590810 OVOS2Q6IE36 1432 aa11.99□□□□□ -0.49
TCF4-247ENST00000590810 KAT6BQ8WYB5 2073 aa11.98□□□□□ -0.49
TCF4-247ENST00000590810 CPSF1Q10570 1443 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms