RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 C1orf167Q5SNV9 1468 aa22.89■■□□□ 1.26
GCDH-212ENST00000590530 ITSN1Q15811 1721 aa22.89■■□□□ 1.26
GCDH-212ENST00000590530 MST1RQ04912 1400 aa22.89■■□□□ 1.25
GCDH-212ENST00000590530 SSH2Q76I76 1423 aa22.89■■□□□ 1.25
GCDH-212ENST00000590530 FAM9BQ8IZU0 186 aa22.89■■□□□ 1.25
GCDH-212ENST00000590530 NSD2O96028 1365 aa22.88■■□□□ 1.25
GCDH-212ENST00000590530 MSH6P52701 1360 aa22.87■■□□□ 1.25
GCDH-212ENST00000590530 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
GCDH-212ENST00000590530 NRKQ7Z2Y5 1582 aa22.86■■□□□ 1.25
GCDH-212ENST00000590530 FOXO3O43524 673 aa22.85■■□□□ 1.25
GCDH-212ENST00000590530 XPCQ01831 940 aaPredicted RBP22.85■■□□□ 1.25
GCDH-212ENST00000590530 PNISRQ8TF01 805 aaKnown RBP22.85■■□□□ 1.25
GCDH-212ENST00000590530 DCCP43146 1447 aa22.85■■□□□ 1.25
GCDH-212ENST00000590530 CADPS2Q86UW7 1296 aa22.84■■□□□ 1.25
GCDH-212ENST00000590530 DDX17Q92841 729 aaKnown RBP22.84■■□□□ 1.25
GCDH-212ENST00000590530 KIF20BQ96Q89 1820 aa22.82■■□□□ 1.24
GCDH-212ENST00000590530 HNRNPUQ00839 825 aaKnown RBP eCLIP22.81■■□□□ 1.24
GCDH-212ENST00000590530 MTHFSP49914 203 aa22.81■■□□□ 1.24
GCDH-212ENST00000590530 NUTM2GQ5VZR2 741 aa22.81■■□□□ 1.24
GCDH-212ENST00000590530 LTBP4Q8N2S1 1624 aa22.8■■□□□ 1.24
GCDH-212ENST00000590530 PAK3O75914 559 aaPredicted RBP22.79■■□□□ 1.24
GCDH-212ENST00000590530 PSME1Q06323 249 aa22.79■■□□□ 1.24
GCDH-212ENST00000590530 INSRP06213 1382 aa22.78■■□□□ 1.24
GCDH-212ENST00000590530 SENP3-EIF4A1A0A087X0R7 540 aa22.78■■□□□ 1.24
GCDH-212ENST00000590530 COG3Q96JB2 828 aa22.78■■□□□ 1.24
GCDH-212ENST00000590530 ANKRD26Q9UPS8 1709 aa22.77■■□□□ 1.24
GCDH-212ENST00000590530 SLAIN2Q9P270 581 aa22.77■■□□□ 1.24
GCDH-212ENST00000590530 TTC21AQ8NDW8 1320 aa22.76■■□□□ 1.23
GCDH-212ENST00000590530 OVOS2A0A0J9YW53 1432 aa22.76■■□□□ 1.23
GCDH-212ENST00000590530 OVOS2Q6IE36 1432 aa22.76■■□□□ 1.23
GCDH-212ENST00000590530 BRINP3Q76B58 766 aa22.75■■□□□ 1.23
GCDH-212ENST00000590530 SOX12O15370 315 aa22.75■■□□□ 1.23
GCDH-212ENST00000590530 ZBED9Q6R2W3 1325 aa22.74■■□□□ 1.23
GCDH-212ENST00000590530 KRT28Q7Z3Y7 464 aa22.74■■□□□ 1.23
GCDH-212ENST00000590530 ABTB2Q8N961 1025 aa22.74■■□□□ 1.23
GCDH-212ENST00000590530 POLKQ9UBT6 870 aa22.74■■□□□ 1.23
GCDH-212ENST00000590530 PIK3C2AO00443 1686 aa22.74■■□□□ 1.23
GCDH-212ENST00000590530 RRS1Q15050 365 aaKnown RBP22.73■■□□□ 1.23
GCDH-212ENST00000590530 EMILIN1Q9Y6C2 1016 aa22.73■■□□□ 1.23
GCDH-212ENST00000590530 SCAF1Q9H7N4 1312 aaKnown RBP22.73■■□□□ 1.23
GCDH-212ENST00000590530 NLRP6P59044 892 aa22.73■■□□□ 1.23
GCDH-212ENST00000590530 USP31Q70CQ4 1352 aa22.71■■□□□ 1.23
GCDH-212ENST00000590530 PPM1GO15355 546 aaPredicted RBP22.71■■□□□ 1.23
GCDH-212ENST00000590530 PLEKHG5O94827 1062 aa22.71■■□□□ 1.23
GCDH-212ENST00000590530 ADAMTS8Q9UP79 889 aa22.71■■□□□ 1.23
GCDH-212ENST00000590530 KIF1AQ12756 1690 aa22.69■■□□□ 1.22
GCDH-212ENST00000590530 GTF3C3Q9Y5Q9 886 aa22.68■■□□□ 1.22
GCDH-212ENST00000590530 BLMP54132 1417 aaPredicted RBP22.68■■□□□ 1.22
GCDH-212ENST00000590530 LMOD2Q6P5Q4 547 aa22.67■■□□□ 1.22
GCDH-212ENST00000590530 AATKQ6ZMQ8 1374 aa22.67■■□□□ 1.22
GCDH-212ENST00000590530 MARF1Q9Y4F3 1742 aaKnown RBP22.67■■□□□ 1.22
GCDH-212ENST00000590530 TRPM3Q9HCF6 1732 aaPredicted RBP22.66■■□□□ 1.22
GCDH-212ENST00000590530 COL3A1P02461 1466 aaPredicted RBP22.65■■□□□ 1.22
GCDH-212ENST00000590530 NPHP3Q7Z494 1330 aa22.64■■□□□ 1.21
GCDH-212ENST00000590530 WDR43Q15061 677 aaKnown RBP eCLIP22.64■■□□□ 1.21
GCDH-212ENST00000590530 PXDNQ92626 1479 aa22.64■■□□□ 1.21
GCDH-212ENST00000590530 CFAP53Q96M91 514 aa22.63■■□□□ 1.21
GCDH-212ENST00000590530 PNPLA6Q8IY17 1366 aa22.63■■□□□ 1.21
GCDH-212ENST00000590530 MAP2P11137 1827 aaKnown RBP22.62■■□□□ 1.21
GCDH-212ENST00000590530 MAP3K19Q56UN5 1328 aa22.62■■□□□ 1.21
GCDH-212ENST00000590530 SHPRHQ149N8 1683 aa22.62■■□□□ 1.21
GCDH-212ENST00000590530 SMG6Q86US8 1419 aaKnown RBP22.61■■□□□ 1.21
GCDH-212ENST00000590530 CCDC146Q8IYE0 955 aa22.6■■□□□ 1.21
GCDH-212ENST00000590530 HSP90AB2PQ58FF8 381 aa22.58■■□□□ 1.21
GCDH-212ENST00000590530 PEAK1Q9H792 1746 aa22.58■■□□□ 1.21
GCDH-212ENST00000590530 SBNO1A3KN83 1393 aa22.57■■□□□ 1.2
GCDH-212ENST00000590530 DIAPH1O60610 1272 aaKnown RBP22.57■■□□□ 1.2
GCDH-212ENST00000590530 CABLES1Q8TDN4 633 aa22.57■■□□□ 1.2
GCDH-212ENST00000590530 SALL2Q9Y467 1007 aaPredicted RBP22.57■■□□□ 1.2
GCDH-212ENST00000590530 SOS2Q07890 1332 aaPredicted RBP22.57■■□□□ 1.2
GCDH-212ENST00000590530 SPATA31A3Q5VYP0 1347 aa22.57■■□□□ 1.2
GCDH-212ENST00000590530 USP54Q70EL1 1684 aa22.57■■□□□ 1.2
GCDH-212ENST00000590530 ALS2Q96Q42 1657 aa22.56■■□□□ 1.2
GCDH-212ENST00000590530 U2SURPO15042 1029 aaKnown RBP22.56■■□□□ 1.2
GCDH-212ENST00000590530 CDK12Q9NYV4 1490 aaPredicted RBP22.56■■□□□ 1.2
GCDH-212ENST00000590530 GCP02774 474 aa22.55■■□□□ 1.2
GCDH-212ENST00000590530 U2AF1L5P0DN76 240 aaPredicted RBP22.55■■□□□ 1.2
GCDH-212ENST00000590530 IL13P35225 146 aa22.55■■□□□ 1.2
GCDH-212ENST00000590530 U2AF1Q01081 240 aaKnown RBP eCLIP22.55■■□□□ 1.2
GCDH-212ENST00000590530 USP19O94966 1318 aa22.55■■□□□ 1.2
GCDH-212ENST00000590530 TNS3Q68CZ2 1445 aa22.55■■□□□ 1.2
GCDH-212ENST00000590530 NFAT5O94916 1531 aa22.54■■□□□ 1.2
GCDH-212ENST00000590530 MED1Q15648 1581 aaPredicted RBP22.54■■□□□ 1.2
GCDH-212ENST00000590530 ZBTB7CA1YPR0 619 aa22.53■■□□□ 1.2
GCDH-212ENST00000590530 EIF4A2Q14240 407 aaKnown RBP22.52■■□□□ 1.2
GCDH-212ENST00000590530 AMPHP49418 695 aa22.51■■□□□ 1.19
GCDH-212ENST00000590530 SLIT3O75094 1523 aa22.51■■□□□ 1.19
GCDH-212ENST00000590530 ROBO1Q9Y6N7 1651 aa22.51■■□□□ 1.19
GCDH-212ENST00000590530 PIP4K2BP78356 416 aa22.51■■□□□ 1.19
GCDH-212ENST00000590530 HOXC9P31274 260 aa22.5■■□□□ 1.19
GCDH-212ENST00000590530 NUDCQ9Y266 331 aa22.5■■□□□ 1.19
GCDH-212ENST00000590530 NHSL1Q5SYE7 1610 aa22.49■■□□□ 1.19
GCDH-212ENST00000590530 APAF1O14727 1248 aa22.49■■□□□ 1.19
GCDH-212ENST00000590530 ZC3H6P61129 1189 aaKnown RBP22.49■■□□□ 1.19
GCDH-212ENST00000590530 KCNH5Q8NCM2 988 aa22.49■■□□□ 1.19
GCDH-212ENST00000590530 FLT4P35916 1363 aa22.49■■□□□ 1.19
GCDH-212ENST00000590530 HMOX1P09601 288 aa22.48■■□□□ 1.19
GCDH-212ENST00000590530 ARHGEF25Q86VW2 580 aa22.47■■□□□ 1.19
GCDH-212ENST00000590530 UBAP1LF5GYI3 381 aa22.47■■□□□ 1.19
GCDH-212ENST00000590530 PLEKHF1Q96S99 279 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms