RNA–Protein interactions for RNA: ENST00000590526.5

RTN2-208, Transcript of reticulon 2, human

TSL 5 BASIC

Gene RTN2, Length 2,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN2-208	ENST00000590526	FAM135B	Q49AJ0	1406 aa		32.26	■■■□□ 2.75
RTN2-208	ENST00000590526	EID1	Q9Y6B2	187 aa		32.26	■■■□□ 2.75
RTN2-208	ENST00000590526	ATP7B	P35670	1465 aa		32.26	■■■□□ 2.75
RTN2-208	ENST00000590526	BCAR3	O75815	825 aa		32.24	■■■□□ 2.75
RTN2-208	ENST00000590526	RIMS1	Q86UR5	1692 aa	Known RBP	32.23	■■■□□ 2.75
RTN2-208	ENST00000590526	CPSF1	Q10570	1443 aa	Known RBP	32.22	■■■□□ 2.75
RTN2-208	ENST00000590526	CCDC61	Q9Y6R9	512 aa		32.22	■■■□□ 2.75
RTN2-208	ENST00000590526		E9PSI1	815 aa		32.21	■■■□□ 2.75
RTN2-208	ENST00000590526	AMOTL2	Q9Y2J4	779 aa		32.21	■■■□□ 2.75
RTN2-208	ENST00000590526	MED14	O60244	1454 aa		32.21	■■■□□ 2.75
RTN2-208	ENST00000590526	NKTR	P30414	1462 aa	Known RBP	32.2	■■■□□ 2.75
RTN2-208	ENST00000590526	EMILIN1	Q9Y6C2	1016 aa		32.19	■■■□□ 2.74
RTN2-208	ENST00000590526	POLK	Q9UBT6	870 aa		32.19	■■■□□ 2.74
RTN2-208	ENST00000590526	SLIT1	O75093	1534 aa		32.18	■■■□□ 2.74
RTN2-208	ENST00000590526	ARHGAP23	Q9P227	1491 aa		32.17	■■■□□ 2.74
RTN2-208	ENST00000590526	ITSN1	Q15811	1721 aa		32.17	■■■□□ 2.74
RTN2-208	ENST00000590526	CDC42BPG	Q6DT37	1551 aa		32.17	■■■□□ 2.74
RTN2-208	ENST00000590526	SIRT1	Q96EB6	747 aa		32.17	■■■□□ 2.74
RTN2-208	ENST00000590526	MON2	Q7Z3U7	1717 aa		32.16	■■■□□ 2.74
RTN2-208	ENST00000590526	SKAP1	Q86WV1	359 aa		32.16	■■■□□ 2.74
RTN2-208	ENST00000590526	AKAP12	Q02952	1782 aa		32.16	■■■□□ 2.74
RTN2-208	ENST00000590526	RGPD8	O14715	1765 aa	Predicted RBP	32.15	■■■□□ 2.74
RTN2-208	ENST00000590526	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.15	■■■□□ 2.74
RTN2-208	ENST00000590526	PLEKHF1	Q96S99	279 aa		32.15	■■■□□ 2.74
RTN2-208	ENST00000590526	DIAPH1	O60610	1272 aa	Known RBP	32.14	■■■□□ 2.74
RTN2-208	ENST00000590526	RRS1	Q15050	365 aa	Known RBP	32.14	■■■□□ 2.74
RTN2-208	ENST00000590526	EDC4	Q6P2E9	1401 aa	Known RBP	32.14	■■■□□ 2.74
RTN2-208	ENST00000590526	PHF23	Q9BUL5	403 aa	Predicted RBP	32.12	■■■□□ 2.73
RTN2-208	ENST00000590526	ADGRB2	O60241	1585 aa		32.1	■■■□□ 2.73
RTN2-208	ENST00000590526	PMFBP1	Q8TBY8	1022 aa		32.1	■■■□□ 2.73
RTN2-208	ENST00000590526	RBM33	Q96EV2	1170 aa	Known RBP	32.09	■■■□□ 2.73
RTN2-208	ENST00000590526	ACE	P12821	1306 aa		32.09	■■■□□ 2.73
RTN2-208	ENST00000590526	HMOX1	P09601	288 aa		32.08	■■■□□ 2.73
RTN2-208	ENST00000590526	PNPLA6	Q8IY17	1366 aa		32.08	■■■□□ 2.73
RTN2-208	ENST00000590526	BCL2L13	Q9BXK5	485 aa		32.07	■■■□□ 2.72
RTN2-208	ENST00000590526	TBX22	Q9Y458	520 aa		32.07	■■■□□ 2.72
RTN2-208	ENST00000590526	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.06	■■■□□ 2.72
RTN2-208	ENST00000590526	TMPO	P42166	694 aa	Known RBP	32.06	■■■□□ 2.72
RTN2-208	ENST00000590526	TSR2	Q969E8	191 aa	Known RBP	32.06	■■■□□ 2.72
RTN2-208	ENST00000590526	SOX12	O15370	315 aa		32.05	■■■□□ 2.72
RTN2-208	ENST00000590526	NGEF	Q8N5V2	710 aa		32.05	■■■□□ 2.72
RTN2-208	ENST00000590526	COG3	Q96JB2	828 aa		32.04	■■■□□ 2.72
RTN2-208	ENST00000590526	KCNA6	P17658	529 aa		32.04	■■■□□ 2.72
RTN2-208	ENST00000590526	TRIM35	Q9UPQ4	493 aa		32.04	■■■□□ 2.72
RTN2-208	ENST00000590526	TOPAZ1	Q8N9V7	1692 aa		32.04	■■■□□ 2.72
RTN2-208	ENST00000590526	MAPK8IP3	Q9UPT6	1336 aa		32.03	■■■□□ 2.72
RTN2-208	ENST00000590526	LRRC7	Q96NW7	1537 aa		32.02	■■■□□ 2.72
RTN2-208	ENST00000590526	WDR63	Q8IWG1	891 aa		32.01	■■■□□ 2.72
RTN2-208	ENST00000590526	TNN	Q9UQP3	1299 aa		32.01	■■■□□ 2.72
RTN2-208	ENST00000590526	PRKAR2B	P31323	418 aa		32.01	■■■□□ 2.71
RTN2-208	ENST00000590526	TTC21B	Q7Z4L5	1316 aa		31.99	■■■□□ 2.71
RTN2-208	ENST00000590526	CCDC27	Q2M243	656 aa		31.99	■■■□□ 2.71
RTN2-208	ENST00000590526	FRAT1	Q92837	279 aa	Predicted RBP	31.99	■■■□□ 2.71
RTN2-208	ENST00000590526	RIPK4	P57078	832 aa		31.99	■■■□□ 2.71
RTN2-208	ENST00000590526	PHACTR3	Q96KR7	559 aa		31.99	■■■□□ 2.71
RTN2-208	ENST00000590526	RSPH6A	Q9H0K4	717 aa		31.97	■■■□□ 2.71
RTN2-208	ENST00000590526	NRK	Q7Z2Y5	1582 aa		31.96	■■■□□ 2.71
RTN2-208	ENST00000590526	PANK1	Q8TE04	598 aa		31.96	■■■□□ 2.71
RTN2-208	ENST00000590526	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	31.96	■■■□□ 2.71
RTN2-208	ENST00000590526	ZNF692	Q9BU19	519 aa	Predicted RBP	31.96	■■■□□ 2.71
RTN2-208	ENST00000590526	DIP2A	Q14689	1571 aa		31.96	■■■□□ 2.71
RTN2-208	ENST00000590526	RARS	P54136	660 aa	Known RBP	31.94	■■■□□ 2.7
RTN2-208	ENST00000590526	XRN1	Q8IZH2	1706 aa	Known RBP	31.94	■■■□□ 2.7
RTN2-208	ENST00000590526	IL13	P35225	146 aa		31.94	■■■□□ 2.7
RTN2-208	ENST00000590526	PLEKHG3	A1L390	1219 aa		31.93	■■■□□ 2.7
RTN2-208	ENST00000590526	THUMPD2	Q9BTF0	503 aa	Known RBP	31.93	■■■□□ 2.7
RTN2-208	ENST00000590526	USP6	P35125	1406 aa		31.92	■■■□□ 2.7
RTN2-208	ENST00000590526	FANCI	Q9NVI1	1328 aa		31.92	■■■□□ 2.7
RTN2-208	ENST00000590526	CANX	P27824	592 aa	Known RBP	31.92	■■■□□ 2.7
RTN2-208	ENST00000590526	PTCH1	Q13635	1447 aa		31.91	■■■□□ 2.7
RTN2-208	ENST00000590526	ADAMTSL3	P82987	1691 aa		31.9	■■■□□ 2.7
RTN2-208	ENST00000590526	ERICH6	Q7L0X2	663 aa		31.89	■■■□□ 2.7
RTN2-208	ENST00000590526	COG6	Q9Y2V7	657 aa		31.89	■■■□□ 2.7
RTN2-208	ENST00000590526	FCHSD2	O94868	740 aa		31.89	■■■□□ 2.7
RTN2-208	ENST00000590526	EXOSC9	Q06265	439 aa	Known RBP	31.89	■■■□□ 2.7
RTN2-208	ENST00000590526	NGDN	Q8NEJ9	315 aa	Known RBP	31.88	■■■□□ 2.69
RTN2-208	ENST00000590526	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.88	■■■□□ 2.69
RTN2-208	ENST00000590526	MYH16	Q9H6N6	1097 aa		31.87	■■■□□ 2.69
RTN2-208	ENST00000590526	AATK	Q6ZMQ8	1374 aa		31.87	■■■□□ 2.69
RTN2-208	ENST00000590526	NUTM2G	Q5VZR2	741 aa		31.87	■■■□□ 2.69
RTN2-208	ENST00000590526	CLUAP1	Q96AJ1	413 aa		31.86	■■■□□ 2.69
RTN2-208	ENST00000590526	RLBP1	P12271	317 aa		31.86	■■■□□ 2.69
RTN2-208	ENST00000590526	LAS1L	Q9Y4W2	734 aa	Known RBP	31.86	■■■□□ 2.69
RTN2-208	ENST00000590526	DLG5	Q8TDM6	1919 aa		31.86	■■■□□ 2.69
RTN2-208	ENST00000590526	AEBP1	Q8IUX7	1158 aa		31.85	■■■□□ 2.69
RTN2-208	ENST00000590526	ANKLE2	Q86XL3	938 aa		31.85	■■■□□ 2.69
RTN2-208	ENST00000590526	PEAK1	Q9H792	1746 aa		31.84	■■■□□ 2.69
RTN2-208	ENST00000590526	OVOS2	A0A0J9YW53	1432 aa		31.84	■■■□□ 2.69
RTN2-208	ENST00000590526	OVOS2	Q6IE36	1432 aa		31.84	■■■□□ 2.69
RTN2-208	ENST00000590526	SETD1B	Q9UPS6	1966 aa	Known RBP	31.83	■■■□□ 2.69
RTN2-208	ENST00000590526	HSP90AB2P	Q58FF8	381 aa		31.82	■■■□□ 2.69
RTN2-208	ENST00000590526	DNAJC5	Q9H3Z4	198 aa		31.81	■■■□□ 2.68
RTN2-208	ENST00000590526	CHD2	O14647	1828 aa	Known RBP	31.81	■■■□□ 2.68
RTN2-208	ENST00000590526	KDM2B	Q8NHM5	1336 aa		31.81	■■■□□ 2.68
RTN2-208	ENST00000590526	MSH5	O43196	834 aa		31.8	■■■□□ 2.68
RTN2-208	ENST00000590526	EIF4A2	Q14240	407 aa	Known RBP	31.8	■■■□□ 2.68
RTN2-208	ENST00000590526	SSH2	Q76I76	1423 aa		31.8	■■■□□ 2.68
RTN2-208	ENST00000590526	NALCN	Q8IZF0	1738 aa		31.79	■■■□□ 2.68
RTN2-208	ENST00000590526	ZNF142	P52746	1687 aa	Predicted RBP	31.79	■■■□□ 2.68
RTN2-208	ENST00000590526	FAM83G	A6ND36	823 aa		31.78	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms