RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 PUS7Q96PZ0 661 aaKnown RBP20.54■□□□□ 0.88
CXXC1-213ENST00000590234 BRD4O60885 1362 aaPredicted RBP20.54■□□□□ 0.88
CXXC1-213ENST00000590234 AKAP12Q02952 1782 aa20.54■□□□□ 0.88
CXXC1-213ENST00000590234 AFF2P51816 1311 aa20.53■□□□□ 0.88
CXXC1-213ENST00000590234 TMF1P82094 1093 aa20.53■□□□□ 0.88
CXXC1-213ENST00000590234 ZNF772Q68DY9 489 aaPredicted RBP20.53■□□□□ 0.88
CXXC1-213ENST00000590234 CABLES1Q8TDN4 633 aa20.53■□□□□ 0.88
CXXC1-213ENST00000590234 NGLY1Q96IV0 654 aa20.52■□□□□ 0.88
CXXC1-213ENST00000590234 CRYBG1Q9Y4K1 1723 aa20.51■□□□□ 0.87
CXXC1-213ENST00000590234 TMC1Q8TDI8 760 aa20.51■□□□□ 0.87
CXXC1-213ENST00000590234 ZNF692Q9BU19 519 aaPredicted RBP20.51■□□□□ 0.87
CXXC1-213ENST00000590234 POTEAQ6S8J7 498 aa20.5■□□□□ 0.87
CXXC1-213ENST00000590234 CPSF1Q10570 1443 aaKnown RBP20.5■□□□□ 0.87
CXXC1-213ENST00000590234 EIF4G2P78344 907 aaKnown RBP eCLIP20.49■□□□□ 0.87
CXXC1-213ENST00000590234 ABTB2Q8N961 1025 aa20.49■□□□□ 0.87
CXXC1-213ENST00000590234 KTN1Q86UP2 1357 aaKnown RBP20.48■□□□□ 0.87
CXXC1-213ENST00000590234 NINLQ9Y2I6 1382 aa20.48■□□□□ 0.87
CXXC1-213ENST00000590234 MON2Q7Z3U7 1717 aa20.48■□□□□ 0.87
CXXC1-213ENST00000590234 SSH2Q76I76 1423 aa20.48■□□□□ 0.87
CXXC1-213ENST00000590234 NUTM2GQ5VZR2 741 aa20.48■□□□□ 0.87
CXXC1-213ENST00000590234 PHRF1Q9P1Y6 1649 aaKnown RBP20.48■□□□□ 0.87
CXXC1-213ENST00000590234 CD163L1Q9NR16 1453 aa20.48■□□□□ 0.87
CXXC1-213ENST00000590234 NRKQ7Z2Y5 1582 aa20.47■□□□□ 0.87
CXXC1-213ENST00000590234 CDCA8Q53HL2 280 aa20.47■□□□□ 0.87
CXXC1-213ENST00000590234 SLC12A5Q9H2X9 1139 aa20.47■□□□□ 0.87
CXXC1-213ENST00000590234 FNBP4Q8N3X1 1017 aaPredicted RBP20.46■□□□□ 0.87
CXXC1-213ENST00000590234 HSPA5P11021 654 aaKnown RBP20.45■□□□□ 0.86
CXXC1-213ENST00000590234 HDGFL2Q7Z4V5 671 aaPredicted RBP20.45■□□□□ 0.86
CXXC1-213ENST00000590234 TERF2IPQ9NYB0 399 aa20.45■□□□□ 0.86
CXXC1-213ENST00000590234 USP21Q9UK80 565 aa20.45■□□□□ 0.86
CXXC1-213ENST00000590234 PIK3C2AO00443 1686 aa20.45■□□□□ 0.86
CXXC1-213ENST00000590234 NLRP13Q86W25 1043 aa20.44■□□□□ 0.86
CXXC1-213ENST00000590234 TTC21BQ7Z4L5 1316 aa20.44■□□□□ 0.86
CXXC1-213ENST00000590234 A0A1W2PP64 1363 aa20.44■□□□□ 0.86
CXXC1-213ENST00000590234 PLCH1Q4KWH8 1693 aa20.43■□□□□ 0.86
CXXC1-213ENST00000590234 SOCS7O14512 581 aa20.43■□□□□ 0.86
CXXC1-213ENST00000590234 TTC21AQ8NDW8 1320 aa20.43■□□□□ 0.86
CXXC1-213ENST00000590234 SLIT2O94813 1529 aa20.43■□□□□ 0.86
CXXC1-213ENST00000590234 USP19O94966 1318 aa20.42■□□□□ 0.86
CXXC1-213ENST00000590234 BCL9LQ86UU0 1499 aa20.42■□□□□ 0.86
CXXC1-213ENST00000590234 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.41■□□□□ 0.86
CXXC1-213ENST00000590234 NLRP6P59044 892 aa20.41■□□□□ 0.86
CXXC1-213ENST00000590234 QTRT2Q9H974 415 aaKnown RBP20.41■□□□□ 0.86
CXXC1-213ENST00000590234 NWD2Q9ULI1 1742 aa20.41■□□□□ 0.86
CXXC1-213ENST00000590234 COL14A1Q05707 1796 aaKnown RBP20.41■□□□□ 0.86
CXXC1-213ENST00000590234 EDC4Q6P2E9 1401 aaKnown RBP20.4■□□□□ 0.86
CXXC1-213ENST00000590234 ANKRD36BQ8N2N9 1353 aa20.39■□□□□ 0.85
CXXC1-213ENST00000590234 FAM83GA6ND36 823 aa20.39■□□□□ 0.85
CXXC1-213ENST00000590234 RXRBP28702 533 aa20.39■□□□□ 0.85
CXXC1-213ENST00000590234 TRPC5Q9UL62 973 aaPredicted RBP20.39■□□□□ 0.85
CXXC1-213ENST00000590234 MYOM1P52179 1685 aa20.38■□□□□ 0.85
CXXC1-213ENST00000590234 SLIT3O75094 1523 aa20.38■□□□□ 0.85
CXXC1-213ENST00000590234 ATRNO75882 1429 aa20.38■□□□□ 0.85
CXXC1-213ENST00000590234 UNC5CLQ8IV45 518 aa20.38■□□□□ 0.85
CXXC1-213ENST00000590234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.38■□□□□ 0.85
CXXC1-213ENST00000590234 PRDM11Q9NQV5 511 aa20.38■□□□□ 0.85
CXXC1-213ENST00000590234 KIAA0232Q92628 1395 aa20.37■□□□□ 0.85
CXXC1-213ENST00000590234 GCP02774 474 aa20.36■□□□□ 0.85
CXXC1-213ENST00000590234 ZC3H6P61129 1189 aaKnown RBP20.36■□□□□ 0.85
CXXC1-213ENST00000590234 RBM6P78332 1123 aaKnown RBP20.36■□□□□ 0.85
CXXC1-213ENST00000590234 NRAPQ86VF7 1730 aa20.35■□□□□ 0.85
CXXC1-213ENST00000590234 USP54Q70EL1 1684 aa20.35■□□□□ 0.85
CXXC1-213ENST00000590234 CPDO75976 1380 aa20.34■□□□□ 0.85
CXXC1-213ENST00000590234 BTG4Q9NY30 223 aa20.34■□□□□ 0.85
CXXC1-213ENST00000590234 USP31Q70CQ4 1352 aa20.34■□□□□ 0.85
CXXC1-213ENST00000590234 CDK12Q9NYV4 1490 aaPredicted RBP20.33■□□□□ 0.85
CXXC1-213ENST00000590234 NME9Q86XW9 330 aa20.33■□□□□ 0.85
CXXC1-213ENST00000590234 POLR3GLQ9BT43 218 aa20.33■□□□□ 0.85
CXXC1-213ENST00000590234 CHRNA2Q15822 529 aa20.32■□□□□ 0.84
CXXC1-213ENST00000590234 KCNH5Q8NCM2 988 aa20.31■□□□□ 0.84
CXXC1-213ENST00000590234 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
CXXC1-213ENST00000590234 VPS72Q15906 364 aa20.3■□□□□ 0.84
CXXC1-213ENST00000590234 GJD4Q96KN9 370 aaPredicted RBP20.3■□□□□ 0.84
CXXC1-213ENST00000590234 LMO7Q8WWI1 1683 aa20.29■□□□□ 0.84
CXXC1-213ENST00000590234 RGS12O14924 1447 aa20.29■□□□□ 0.84
CXXC1-213ENST00000590234 GLI3P10071 1580 aa20.29■□□□□ 0.84
CXXC1-213ENST00000590234 OVOS2A0A0J9YW53 1432 aa20.28■□□□□ 0.84
CXXC1-213ENST00000590234 OVOS2Q6IE36 1432 aa20.28■□□□□ 0.84
CXXC1-213ENST00000590234 NFAT5O94916 1531 aa20.28■□□□□ 0.84
CXXC1-213ENST00000590234 ZBTB7CA1YPR0 619 aa20.28■□□□□ 0.84
CXXC1-213ENST00000590234 SOX12O15370 315 aa20.28■□□□□ 0.84
CXXC1-213ENST00000590234 CCDC9Q9Y3X0 531 aaKnown RBP20.28■□□□□ 0.84
CXXC1-213ENST00000590234 CAMTA1Q9Y6Y1 1673 aa20.26■□□□□ 0.83
CXXC1-213ENST00000590234 C11orf95C9JLR9 678 aaPredicted RBP20.26■□□□□ 0.83
CXXC1-213ENST00000590234 NSD3Q9BZ95 1437 aa20.26■□□□□ 0.83
CXXC1-213ENST00000590234 AATKQ6ZMQ8 1374 aa20.25■□□□□ 0.83
CXXC1-213ENST00000590234 KIF20BQ96Q89 1820 aa20.25■□□□□ 0.83
CXXC1-213ENST00000590234 ARHGEF25Q86VW2 580 aa20.24■□□□□ 0.83
CXXC1-213ENST00000590234 COG3Q96JB2 828 aa20.24■□□□□ 0.83
CXXC1-213ENST00000590234 CARD14Q9BXL6 1004 aa20.24■□□□□ 0.83
CXXC1-213ENST00000590234 STRN4Q9NRL3 753 aa20.24■□□□□ 0.83
CXXC1-213ENST00000590234 COL18A1P39060 1754 aa20.23■□□□□ 0.83
CXXC1-213ENST00000590234 FYB1O15117 783 aa20.22■□□□□ 0.83
CXXC1-213ENST00000590234 EVA1CP58658 441 aa20.22■□□□□ 0.83
CXXC1-213ENST00000590234 COL5A2P05997 1499 aaPredicted RBP20.22■□□□□ 0.83
CXXC1-213ENST00000590234 KIF7Q2M1P5 1343 aa20.22■□□□□ 0.83
CXXC1-213ENST00000590234 ABCC6O95255 1503 aa20.22■□□□□ 0.83
CXXC1-213ENST00000590234 LTN1O94822 1766 aa20.21■□□□□ 0.83
CXXC1-213ENST00000590234 GGNBP2Q9H3C7 697 aa20.21■□□□□ 0.83
CXXC1-213ENST00000590234 SPATA31A5Q5VU36 1347 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms