RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 ZRANB1Q9UGI0 708 aa23.65■■□□□ 1.38
MBD3-206ENST00000589901 BLMP54132 1417 aaPredicted RBP23.65■■□□□ 1.38
MBD3-206ENST00000589901 KRT27Q7Z3Y8 459 aa23.63■■□□□ 1.37
MBD3-206ENST00000589901 BRWD3Q6RI45 1802 aa23.63■■□□□ 1.37
MBD3-206ENST00000589901 A0A0G2JS52 829 aa23.62■■□□□ 1.37
MBD3-206ENST00000589901 MYT1Q01538 1121 aa23.62■■□□□ 1.37
MBD3-206ENST00000589901 FAM98CQ17RN3 349 aaKnown RBP23.62■■□□□ 1.37
MBD3-206ENST00000589901 DEFB132Q7Z7B7 95 aa23.61■■□□□ 1.37
MBD3-206ENST00000589901 NRAPQ86VF7 1730 aa23.6■■□□□ 1.37
MBD3-206ENST00000589901 PRDM11Q9NQV5 511 aa23.6■■□□□ 1.37
MBD3-206ENST00000589901 CCDC61Q9Y6R9 512 aa23.6■■□□□ 1.37
MBD3-206ENST00000589901 COL14A1Q05707 1796 aaKnown RBP23.6■■□□□ 1.37
MBD3-206ENST00000589901 ACEP12821 1306 aa23.59■■□□□ 1.37
MBD3-206ENST00000589901 NUTM2GQ5VZR2 741 aa23.59■■□□□ 1.37
MBD3-206ENST00000589901 POLR3AO14802 1390 aaPredicted RBP23.58■■□□□ 1.37
MBD3-206ENST00000589901 NBPF8Q3BBV2 869 aa23.58■■□□□ 1.37
MBD3-206ENST00000589901 ITSN1Q15811 1721 aa23.58■■□□□ 1.37
MBD3-206ENST00000589901 KIAA1210Q9ULL0 1709 aa23.58■■□□□ 1.37
MBD3-206ENST00000589901 CRYBG1Q9Y4K1 1723 aa23.58■■□□□ 1.37
MBD3-206ENST00000589901 KIAA0232Q92628 1395 aa23.57■■□□□ 1.36
MBD3-206ENST00000589901 SF3B2Q13435 895 aaKnown RBP23.57■■□□□ 1.36
MBD3-206ENST00000589901 SPATA31A5Q5VU36 1347 aa23.57■■□□□ 1.36
MBD3-206ENST00000589901 SPATA31A7Q8IWB4 1347 aa23.57■■□□□ 1.36
MBD3-206ENST00000589901 PLEKHG3A1L390 1219 aa23.56■■□□□ 1.36
MBD3-206ENST00000589901 CHRNA2Q15822 529 aa23.56■■□□□ 1.36
MBD3-206ENST00000589901 ZC3H6P61129 1189 aaKnown RBP23.54■■□□□ 1.36
MBD3-206ENST00000589901 CENPJQ9HC77 1338 aaPredicted RBP23.54■■□□□ 1.36
MBD3-206ENST00000589901 TOPAZ1Q8N9V7 1692 aa23.54■■□□□ 1.36
MBD3-206ENST00000589901 SRPK2P78362 688 aaKnown RBP23.53■■□□□ 1.36
MBD3-206ENST00000589901 FAM182BQ5T319 152 aa23.52■■□□□ 1.36
MBD3-206ENST00000589901 L3MBTL2Q969R5 705 aa23.52■■□□□ 1.36
MBD3-206ENST00000589901 CABP2Q9NPB3 220 aa23.52■■□□□ 1.36
MBD3-206ENST00000589901 STRN4Q9NRL3 753 aa23.51■■□□□ 1.35
MBD3-206ENST00000589901 ABTB2Q8N961 1025 aa23.5■■□□□ 1.35
MBD3-206ENST00000589901 SIN3AQ96ST3 1273 aa23.5■■□□□ 1.35
MBD3-206ENST00000589901 PPIP5K1Q6PFW1 1433 aa23.5■■□□□ 1.35
MBD3-206ENST00000589901 PHRF1Q9P1Y6 1649 aaKnown RBP23.49■■□□□ 1.35
MBD3-206ENST00000589901 SPATA31A1Q5TZJ5 1347 aa23.49■■□□□ 1.35
MBD3-206ENST00000589901 THSD7AQ9UPZ6 1657 aa23.45■■□□□ 1.34
MBD3-206ENST00000589901 USP19O94966 1318 aa23.45■■□□□ 1.34
MBD3-206ENST00000589901 BAG6P46379 1132 aa23.45■■□□□ 1.34
MBD3-206ENST00000589901 NEUROD1Q13562 356 aa23.44■■□□□ 1.34
MBD3-206ENST00000589901 CABP1Q9NZU7 370 aa23.44■■□□□ 1.34
MBD3-206ENST00000589901 USP35Q9P2H5 1018 aa23.44■■□□□ 1.34
MBD3-206ENST00000589901 NRKQ7Z2Y5 1582 aa23.44■■□□□ 1.34
MBD3-206ENST00000589901 EVA1CP58658 441 aa23.43■■□□□ 1.34
MBD3-206ENST00000589901 NLRP13Q86W25 1043 aa23.42■■□□□ 1.34
MBD3-206ENST00000589901 SSH2Q76I76 1423 aa23.42■■□□□ 1.34
MBD3-206ENST00000589901 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
MBD3-206ENST00000589901 CPDO75976 1380 aa23.41■■□□□ 1.34
MBD3-206ENST00000589901 GCP02774 474 aa23.41■■□□□ 1.34
MBD3-206ENST00000589901 EN1Q05925 392 aaPredicted RBP23.41■■□□□ 1.34
MBD3-206ENST00000589901 CAMTA1Q9Y6Y1 1673 aa23.41■■□□□ 1.34
MBD3-206ENST00000589901 LARP1Q6PKG0 1096 aaKnown RBP23.4■■□□□ 1.34
MBD3-206ENST00000589901 USP6P35125 1406 aa23.38■■□□□ 1.33
MBD3-206ENST00000589901 PSDA5PKW4 1024 aaPredicted RBP23.37■■□□□ 1.33
MBD3-206ENST00000589901 BARGINQ6ZT62 677 aa23.37■■□□□ 1.33
MBD3-206ENST00000589901 BRD4O60885 1362 aaPredicted RBP23.37■■□□□ 1.33
MBD3-206ENST00000589901 ROCK2O75116 1388 aaKnown RBP23.37■■□□□ 1.33
MBD3-206ENST00000589901 EVC2Q86UK5 1308 aa23.36■■□□□ 1.33
MBD3-206ENST00000589901 NLRP6P59044 892 aa23.36■■□□□ 1.33
MBD3-206ENST00000589901 TRPM1Q7Z4N2 1603 aa23.36■■□□□ 1.33
MBD3-206ENST00000589901 LMO7Q8WWI1 1683 aa23.35■■□□□ 1.33
MBD3-206ENST00000589901 TRIM37O94972 964 aa23.35■■□□□ 1.33
MBD3-206ENST00000589901 FAM196AQ6ZSG2 479 aa23.35■■□□□ 1.33
MBD3-206ENST00000589901 TCP11L2Q8N4U5 519 aa23.35■■□□□ 1.33
MBD3-206ENST00000589901 ZBTB7CA1YPR0 619 aa23.34■■□□□ 1.33
MBD3-206ENST00000589901 RGPD1P0DJD0 1748 aa23.33■■□□□ 1.33
MBD3-206ENST00000589901 PDE3BQ13370 1112 aa23.32■■□□□ 1.32
MBD3-206ENST00000589901 EZH2Q15910 746 aaKnown RBP23.32■■□□□ 1.32
MBD3-206ENST00000589901 DISP2A7MBM2 1401 aa23.32■■□□□ 1.32
MBD3-206ENST00000589901 COL5A2P05997 1499 aaPredicted RBP23.31■■□□□ 1.32
MBD3-206ENST00000589901 TNS1Q9HBL0 1735 aaKnown RBP23.3■■□□□ 1.32
MBD3-206ENST00000589901 THRAP3Q9Y2W1 955 aaKnown RBP23.29■■□□□ 1.32
MBD3-206ENST00000589901 SLIT3O75094 1523 aa23.28■■□□□ 1.32
MBD3-206ENST00000589901 AATKQ6ZMQ8 1374 aa23.28■■□□□ 1.32
MBD3-206ENST00000589901 APBA3O96018 575 aa23.28■■□□□ 1.32
MBD3-206ENST00000589901 CAMKK2Q96RR4 588 aa23.28■■□□□ 1.32
MBD3-206ENST00000589901 R3HDM1Q15032 1099 aaKnown RBP23.27■■□□□ 1.32
MBD3-206ENST00000589901 TTC21BQ7Z4L5 1316 aa23.27■■□□□ 1.32
MBD3-206ENST00000589901 CRB1P82279 1406 aa23.26■■□□□ 1.31
MBD3-206ENST00000589901 PIK3C2AO00443 1686 aa23.26■■□□□ 1.31
MBD3-206ENST00000589901 ZNF692Q9BU19 519 aaPredicted RBP23.26■■□□□ 1.31
MBD3-206ENST00000589901 AXIN2Q9Y2T1 843 aa23.25■■□□□ 1.31
MBD3-206ENST00000589901 SOX12O15370 315 aa23.23■■□□□ 1.31
MBD3-206ENST00000589901 CPSF1Q10570 1443 aaKnown RBP23.23■■□□□ 1.31
MBD3-206ENST00000589901 LRP5O75197 1615 aa23.22■■□□□ 1.31
MBD3-206ENST00000589901 TOM1L2Q6ZVM7 507 aa23.22■■□□□ 1.31
MBD3-206ENST00000589901 ARHGEF25Q86VW2 580 aa23.21■■□□□ 1.31
MBD3-206ENST00000589901 CARD11Q9BXL7 1154 aa23.21■■□□□ 1.31
MBD3-206ENST00000589901 KTN1Q86UP2 1357 aaKnown RBP23.2■■□□□ 1.3
MBD3-206ENST00000589901 PARD3Q8TEW0 1356 aa23.2■■□□□ 1.3
MBD3-206ENST00000589901 TTC21AQ8NDW8 1320 aa23.2■■□□□ 1.3
MBD3-206ENST00000589901 KCNH5Q8NCM2 988 aa23.2■■□□□ 1.3
MBD3-206ENST00000589901 SBNO2Q9Y2G9 1366 aa23.18■■□□□ 1.3
MBD3-206ENST00000589901 WDR17Q8IZU2 1322 aa23.18■■□□□ 1.3
MBD3-206ENST00000589901 COL18A1P39060 1754 aa23.18■■□□□ 1.3
MBD3-206ENST00000589901 PARP4Q9UKK3 1724 aaKnown RBP23.18■■□□□ 1.3
MBD3-206ENST00000589901 AKAP12Q02952 1782 aa23.17■■□□□ 1.3
MBD3-206ENST00000589901 DDB1Q16531 1140 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms