RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 PANK3Q9H999 370 aa13.94□□□□□ -0.18
APOC1-205ENST00000589781 FNBP4Q8N3X1 1017 aaPredicted RBP13.93□□□□□ -0.18
APOC1-205ENST00000589781 CABP2Q9NPB3 220 aa13.93□□□□□ -0.18
APOC1-205ENST00000589781 BCL9LQ86UU0 1499 aa13.93□□□□□ -0.18
APOC1-205ENST00000589781 TOPAZ1Q8N9V7 1692 aa13.92□□□□□ -0.18
APOC1-205ENST00000589781 PLEKHG3A1L390 1219 aa13.92□□□□□ -0.18
APOC1-205ENST00000589781 PSME1Q06323 249 aa13.92□□□□□ -0.18
APOC1-205ENST00000589781 POLR3AO14802 1390 aaPredicted RBP13.92□□□□□ -0.18
APOC1-205ENST00000589781 KTN1Q86UP2 1357 aaKnown RBP13.92□□□□□ -0.18
APOC1-205ENST00000589781 EVC2Q86UK5 1308 aa13.91□□□□□ -0.18
APOC1-205ENST00000589781 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
APOC1-205ENST00000589781 CCDC184Q52MB2 194 aa13.91□□□□□ -0.18
APOC1-205ENST00000589781 ZNF772Q68DY9 489 aaPredicted RBP13.91□□□□□ -0.18
APOC1-205ENST00000589781 ALS2Q96Q42 1657 aa13.91□□□□□ -0.18
APOC1-205ENST00000589781 ACEP12821 1306 aa13.9□□□□□ -0.18
APOC1-205ENST00000589781 NGLY1Q96IV0 654 aa13.9□□□□□ -0.18
APOC1-205ENST00000589781 CCDC61Q9Y6R9 512 aa13.9□□□□□ -0.18
APOC1-205ENST00000589781 PARD3Q8TEW0 1356 aa13.9□□□□□ -0.18
APOC1-205ENST00000589781 PER1O15534 1290 aaPredicted RBP13.89□□□□□ -0.19
APOC1-205ENST00000589781 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
APOC1-205ENST00000589781 QTRT2Q9H974 415 aaKnown RBP13.89□□□□□ -0.19
APOC1-205ENST00000589781 ATRNO75882 1429 aa13.89□□□□□ -0.19
APOC1-205ENST00000589781 ABCA3Q99758 1704 aa13.88□□□□□ -0.19
APOC1-205ENST00000589781 NGDNQ8NEJ9 315 aaKnown RBP13.88□□□□□ -0.19
APOC1-205ENST00000589781 SLIT2O94813 1529 aa13.88□□□□□ -0.19
APOC1-205ENST00000589781 CRYBG1Q9Y4K1 1723 aa13.87□□□□□ -0.19
APOC1-205ENST00000589781 CENPBP07199 599 aaPredicted RBP13.87□□□□□ -0.19
APOC1-205ENST00000589781 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
APOC1-205ENST00000589781 USP21Q9UK80 565 aa13.87□□□□□ -0.19
APOC1-205ENST00000589781 FAM83GA6ND36 823 aa13.86□□□□□ -0.19
APOC1-205ENST00000589781 RXRBP28702 533 aa13.86□□□□□ -0.19
APOC1-205ENST00000589781 SRPK2P78362 688 aaKnown RBP13.86□□□□□ -0.19
APOC1-205ENST00000589781 CC2D1BQ5T0F9 858 aaKnown RBP13.86□□□□□ -0.19
APOC1-205ENST00000589781 LMOD2Q6P5Q4 547 aa13.86□□□□□ -0.19
APOC1-205ENST00000589781 CABP1Q9NZU7 370 aa13.86□□□□□ -0.19
APOC1-205ENST00000589781 RGS12O14924 1447 aa13.86□□□□□ -0.19
APOC1-205ENST00000589781 PPIP5K1Q6PFW1 1433 aa13.86□□□□□ -0.19
APOC1-205ENST00000589781 NSD3Q9BZ95 1437 aa13.86□□□□□ -0.19
APOC1-205ENST00000589781 MARF1Q9Y4F3 1742 aaKnown RBP13.86□□□□□ -0.19
APOC1-205ENST00000589781 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
APOC1-205ENST00000589781 ARHGEF10O15013 1369 aa13.85□□□□□ -0.19
APOC1-205ENST00000589781 ATAD2Q6PL18 1390 aa13.85□□□□□ -0.19
APOC1-205ENST00000589781 SSH2Q76I76 1423 aa13.85□□□□□ -0.19
APOC1-205ENST00000589781 TMC1Q8TDI8 760 aa13.85□□□□□ -0.19
APOC1-205ENST00000589781 ITSN1Q15811 1721 aa13.84□□□□□ -0.19
APOC1-205ENST00000589781 RBM6P78332 1123 aaKnown RBP13.84□□□□□ -0.19
APOC1-205ENST00000589781 RALBP1Q15311 655 aa13.84□□□□□ -0.19
APOC1-205ENST00000589781 NUTM2GQ5VZR2 741 aa13.84□□□□□ -0.19
APOC1-205ENST00000589781 KNSTRNQ9Y448 316 aa13.84□□□□□ -0.19
APOC1-205ENST00000589781 KIF20BQ96Q89 1820 aa13.84□□□□□ -0.19
APOC1-205ENST00000589781 CDK12Q9NYV4 1490 aaPredicted RBP13.84□□□□□ -0.19
APOC1-205ENST00000589781 ANKRD26Q9UPS8 1709 aa13.84□□□□□ -0.19
APOC1-205ENST00000589781 ANKRD36BQ8N2N9 1353 aa13.83□□□□□ -0.19
APOC1-205ENST00000589781 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
APOC1-205ENST00000589781 PUS7Q96PZ0 661 aaKnown RBP13.83□□□□□ -0.2
APOC1-205ENST00000589781 SLC12A5Q9H2X9 1139 aa13.83□□□□□ -0.2
APOC1-205ENST00000589781 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.2
APOC1-205ENST00000589781 CD163L1Q9NR16 1453 aa13.82□□□□□ -0.2
APOC1-205ENST00000589781 AKAP12Q02952 1782 aa13.82□□□□□ -0.2
APOC1-205ENST00000589781 PAK3O75914 559 aaPredicted RBP13.82□□□□□ -0.2
APOC1-205ENST00000589781 CARD14Q9BXL6 1004 aa13.82□□□□□ -0.2
APOC1-205ENST00000589781 GLI3P10071 1580 aa13.82□□□□□ -0.2
APOC1-205ENST00000589781 A0A1W2PP64 1363 aa13.82□□□□□ -0.2
APOC1-205ENST00000589781 BRD4O60885 1362 aaPredicted RBP13.82□□□□□ -0.2
APOC1-205ENST00000589781 NPC1L1Q9UHC9 1359 aa13.82□□□□□ -0.2
APOC1-205ENST00000589781 UNC5CLQ8IV45 518 aa13.81□□□□□ -0.2
APOC1-205ENST00000589781 TRPC5Q9UL62 973 aaPredicted RBP13.81□□□□□ -0.2
APOC1-205ENST00000589781 USP6P35125 1406 aa13.81□□□□□ -0.2
APOC1-205ENST00000589781 CPSF1Q10570 1443 aaKnown RBP13.81□□□□□ -0.2
APOC1-205ENST00000589781 MON2Q7Z3U7 1717 aa13.8□□□□□ -0.2
APOC1-205ENST00000589781 USP19O94966 1318 aa13.8□□□□□ -0.2
APOC1-205ENST00000589781 FAM9BQ8IZU0 186 aa13.79□□□□□ -0.2
APOC1-205ENST00000589781 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
APOC1-205ENST00000589781 PLCH1Q4KWH8 1693 aa13.79□□□□□ -0.2
APOC1-205ENST00000589781 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
APOC1-205ENST00000589781 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
APOC1-205ENST00000589781 PHRF1Q9P1Y6 1649 aaKnown RBP13.78□□□□□ -0.2
APOC1-205ENST00000589781 NRAPQ86VF7 1730 aa13.78□□□□□ -0.2
APOC1-205ENST00000589781 CHRNA2Q15822 529 aa13.77□□□□□ -0.21
APOC1-205ENST00000589781 VPS72Q15906 364 aa13.77□□□□□ -0.21
APOC1-205ENST00000589781 NLRP13Q86W25 1043 aa13.77□□□□□ -0.21
APOC1-205ENST00000589781 KIAA0232Q92628 1395 aa13.77□□□□□ -0.21
APOC1-205ENST00000589781 NRKQ7Z2Y5 1582 aa13.76□□□□□ -0.21
APOC1-205ENST00000589781 TTC21BQ7Z4L5 1316 aa13.76□□□□□ -0.21
APOC1-205ENST00000589781 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
APOC1-205ENST00000589781 ZC3H6P61129 1189 aaKnown RBP13.76□□□□□ -0.21
APOC1-205ENST00000589781 ABTB2Q8N961 1025 aa13.76□□□□□ -0.21
APOC1-205ENST00000589781 BTG4Q9NY30 223 aa13.76□□□□□ -0.21
APOC1-205ENST00000589781 ZRANB1Q9UGI0 708 aa13.76□□□□□ -0.21
APOC1-205ENST00000589781 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
APOC1-205ENST00000589781 ONECUT3O60422 494 aaPredicted RBP13.75□□□□□ -0.21
APOC1-205ENST00000589781 NWD2Q9ULI1 1742 aa13.74□□□□□ -0.21
APOC1-205ENST00000589781 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
APOC1-205ENST00000589781 SLIT3O75094 1523 aa13.74□□□□□ -0.21
APOC1-205ENST00000589781 COL14A1Q05707 1796 aaKnown RBP13.73□□□□□ -0.21
APOC1-205ENST00000589781 NSD2O96028 1365 aa13.73□□□□□ -0.21
APOC1-205ENST00000589781 CAMTA1Q9Y6Y1 1673 aa13.73□□□□□ -0.21
APOC1-205ENST00000589781 CGNL1Q0VF96 1302 aa13.73□□□□□ -0.21
APOC1-205ENST00000589781 GCP02774 474 aa13.73□□□□□ -0.21
APOC1-205ENST00000589781 HNRNPUQ00839 825 aaKnown RBP eCLIP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms