RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 C11orf95C9JLR9 678 aaPredicted RBP27.11■■□□□ 1.93
CIRBP-220ENST00000588917 PNPLA6Q8IY17 1366 aa27.1■■□□□ 1.93
CIRBP-220ENST00000588917 SBNO1A3KN83 1393 aa27.08■■□□□ 1.93
CIRBP-220ENST00000588917 XPCQ01831 940 aaPredicted RBP27.07■■□□□ 1.92
CIRBP-220ENST00000588917 C8orf37Q96NL8 207 aa27.07■■□□□ 1.92
CIRBP-220ENST00000588917 KIF7Q2M1P5 1343 aa27.07■■□□□ 1.92
CIRBP-220ENST00000588917 UPF1Q92900 1129 aaKnown RBP eCLIP27.06■■□□□ 1.92
CIRBP-220ENST00000588917 CPSF1Q10570 1443 aaKnown RBP27.06■■□□□ 1.92
CIRBP-220ENST00000588917 PAK3O75914 559 aaPredicted RBP27.05■■□□□ 1.92
CIRBP-220ENST00000588917 KTN1Q86UP2 1357 aaKnown RBP27.05■■□□□ 1.92
CIRBP-220ENST00000588917 PXDNQ92626 1479 aa27.05■■□□□ 1.92
CIRBP-220ENST00000588917 SPATA31A3Q5VYP0 1347 aa27.04■■□□□ 1.92
CIRBP-220ENST00000588917 CDK12Q9NYV4 1490 aaPredicted RBP27.04■■□□□ 1.92
CIRBP-220ENST00000588917 QTRT2Q9H974 415 aaKnown RBP27.03■■□□□ 1.92
CIRBP-220ENST00000588917 ANKRD36BQ8N2N9 1353 aa27.02■■□□□ 1.92
CIRBP-220ENST00000588917 USP6P35125 1406 aa27.01■■□□□ 1.91
CIRBP-220ENST00000588917 CCDC7Q96M83 1385 aa27.01■■□□□ 1.91
CIRBP-220ENST00000588917 WASHC2AQ641Q2 1341 aa27.01■■□□□ 1.91
CIRBP-220ENST00000588917 NGLY1Q96IV0 654 aa27.01■■□□□ 1.91
CIRBP-220ENST00000588917 ARHGEF10O15013 1369 aa27■■□□□ 1.91
CIRBP-220ENST00000588917 ADAMTS2O95450 1211 aa27■■□□□ 1.91
CIRBP-220ENST00000588917 LMOD2Q6P5Q4 547 aa27■■□□□ 1.91
CIRBP-220ENST00000588917 TTC21AQ8NDW8 1320 aa26.99■■□□□ 1.91
CIRBP-220ENST00000588917 RBM6P78332 1123 aaKnown RBP26.99■■□□□ 1.91
CIRBP-220ENST00000588917 A0A1W2PP64 1363 aa26.98■■□□□ 1.91
CIRBP-220ENST00000588917 CD163L1Q9NR16 1453 aa26.98■■□□□ 1.91
CIRBP-220ENST00000588917 TNS3Q68CZ2 1445 aa26.98■■□□□ 1.91
CIRBP-220ENST00000588917 TTC21BQ7Z4L5 1316 aa26.97■■□□□ 1.91
CIRBP-220ENST00000588917 ABTB2Q8N961 1025 aa26.97■■□□□ 1.91
CIRBP-220ENST00000588917 PANK3Q9H999 370 aa26.95■■□□□ 1.9
CIRBP-220ENST00000588917 EDC4Q6P2E9 1401 aaKnown RBP26.95■■□□□ 1.9
CIRBP-220ENST00000588917 SSH2Q76I76 1423 aa26.95■■□□□ 1.9
CIRBP-220ENST00000588917 NLRP13Q86W25 1043 aa26.94■■□□□ 1.9
CIRBP-220ENST00000588917 AKAP12Q02952 1782 aa26.92■■□□□ 1.9
CIRBP-220ENST00000588917 ZNF316A6NFI3 1004 aaPredicted RBP26.91■■□□□ 1.9
CIRBP-220ENST00000588917 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.91■■□□□ 1.9
CIRBP-220ENST00000588917 TRPM3Q9HCF6 1732 aaPredicted RBP26.9■■□□□ 1.9
CIRBP-220ENST00000588917 NLRP6P59044 892 aa26.9■■□□□ 1.9
CIRBP-220ENST00000588917 USP21Q9UK80 565 aa26.9■■□□□ 1.9
CIRBP-220ENST00000588917 CARD14Q9BXL6 1004 aa26.89■■□□□ 1.9
CIRBP-220ENST00000588917 RGS12O14924 1447 aa26.89■■□□□ 1.89
CIRBP-220ENST00000588917 MYOM1P52179 1685 aa26.89■■□□□ 1.89
CIRBP-220ENST00000588917 FNBP4Q8N3X1 1017 aaPredicted RBP26.88■■□□□ 1.89
CIRBP-220ENST00000588917 MON2Q7Z3U7 1717 aa26.87■■□□□ 1.89
CIRBP-220ENST00000588917 TRPC5Q9UL62 973 aaPredicted RBP26.87■■□□□ 1.89
CIRBP-220ENST00000588917 KNSTRNQ9Y448 316 aa26.87■■□□□ 1.89
CIRBP-220ENST00000588917 HAP1P54257 671 aaPredicted RBP26.86■■□□□ 1.89
CIRBP-220ENST00000588917 CGNL1Q0VF96 1302 aa26.85■■□□□ 1.89
CIRBP-220ENST00000588917 NUTM2GQ5VZR2 741 aa26.84■■□□□ 1.89
CIRBP-220ENST00000588917 ALS2Q96Q42 1657 aa26.84■■□□□ 1.89
CIRBP-220ENST00000588917 USP31Q70CQ4 1352 aa26.84■■□□□ 1.89
CIRBP-220ENST00000588917 NSD3Q9BZ95 1437 aa26.83■■□□□ 1.89
CIRBP-220ENST00000588917 NME9Q86XW9 330 aa26.83■■□□□ 1.89
CIRBP-220ENST00000588917 FYB1O15117 783 aa26.82■■□□□ 1.88
CIRBP-220ENST00000588917 KCNH5Q8NCM2 988 aa26.82■■□□□ 1.88
CIRBP-220ENST00000588917 COG3Q96JB2 828 aa26.82■■□□□ 1.88
CIRBP-220ENST00000588917 COL22A1Q8NFW1 1626 aaPredicted RBP26.82■■□□□ 1.88
CIRBP-220ENST00000588917 NRKQ7Z2Y5 1582 aa26.81■■□□□ 1.88
CIRBP-220ENST00000588917 CABLES1Q8TDN4 633 aa26.8■■□□□ 1.88
CIRBP-220ENST00000588917 PER1O15534 1290 aaPredicted RBP26.79■■□□□ 1.88
CIRBP-220ENST00000588917 PLEKHG5O94827 1062 aa26.78■■□□□ 1.88
CIRBP-220ENST00000588917 GCP02774 474 aa26.78■■□□□ 1.88
CIRBP-220ENST00000588917 USP19O94966 1318 aa26.78■■□□□ 1.88
CIRBP-220ENST00000588917 ATRNO75882 1429 aa26.77■■□□□ 1.88
CIRBP-220ENST00000588917 GGNBP2Q9H3C7 697 aa26.76■■□□□ 1.87
CIRBP-220ENST00000588917 DDX10Q13206 875 aaKnown RBP26.75■■□□□ 1.87
CIRBP-220ENST00000588917 ZRANB1Q9UGI0 708 aa26.75■■□□□ 1.87
CIRBP-220ENST00000588917 NSD2O96028 1365 aa26.74■■□□□ 1.87
CIRBP-220ENST00000588917 PIK3C2AO00443 1686 aa26.74■■□□□ 1.87
CIRBP-220ENST00000588917 BCL9LQ86UU0 1499 aa26.74■■□□□ 1.87
CIRBP-220ENST00000588917 AMER1Q5JTC6 1135 aaPredicted RBP26.7■■□□□ 1.86
CIRBP-220ENST00000588917 OVOS2A0A0J9YW53 1432 aa26.7■■□□□ 1.86
CIRBP-220ENST00000588917 OVOS2Q6IE36 1432 aa26.7■■□□□ 1.86
CIRBP-220ENST00000588917 ZC3H6P61129 1189 aaKnown RBP26.69■■□□□ 1.86
CIRBP-220ENST00000588917 GJD4Q96KN9 370 aaPredicted RBP26.69■■□□□ 1.86
CIRBP-220ENST00000588917 NPC1L1Q9UHC9 1359 aa26.69■■□□□ 1.86
CIRBP-220ENST00000588917 SLIT3O75094 1523 aa26.68■■□□□ 1.86
CIRBP-220ENST00000588917 MORC1Q86VD1 984 aa26.67■■□□□ 1.86
CIRBP-220ENST00000588917 PRDM11Q9NQV5 511 aa26.67■■□□□ 1.86
CIRBP-220ENST00000588917 CPDO75976 1380 aa26.67■■□□□ 1.86
CIRBP-220ENST00000588917 USP54Q70EL1 1684 aa26.66■■□□□ 1.86
CIRBP-220ENST00000588917 UNC5CLQ8IV45 518 aa26.66■■□□□ 1.86
CIRBP-220ENST00000588917 SOX12O15370 315 aa26.65■■□□□ 1.86
CIRBP-220ENST00000588917 FAM83GA6ND36 823 aa26.64■■□□□ 1.86
CIRBP-220ENST00000588917 ARHGEF25Q86VW2 580 aa26.64■■□□□ 1.86
CIRBP-220ENST00000588917 KIF20BQ96Q89 1820 aa26.63■■□□□ 1.85
CIRBP-220ENST00000588917 KIAA0232Q92628 1395 aa26.63■■□□□ 1.85
CIRBP-220ENST00000588917 PHRF1Q9P1Y6 1649 aaKnown RBP26.63■■□□□ 1.85
CIRBP-220ENST00000588917 CC2D1BQ5T0F9 858 aaKnown RBP26.62■■□□□ 1.85
CIRBP-220ENST00000588917 MARF1Q9Y4F3 1742 aaKnown RBP26.62■■□□□ 1.85
CIRBP-220ENST00000588917 CRYBG1Q9Y4K1 1723 aa26.62■■□□□ 1.85
CIRBP-220ENST00000588917 SLIT2O94813 1529 aa26.61■■□□□ 1.85
CIRBP-220ENST00000588917 CCDC125Q86Z20 511 aa26.61■■□□□ 1.85
CIRBP-220ENST00000588917 ABCA3Q99758 1704 aa26.6■■□□□ 1.85
CIRBP-220ENST00000588917 ZBTB7CA1YPR0 619 aa26.59■■□□□ 1.85
CIRBP-220ENST00000588917 AATKQ6ZMQ8 1374 aa26.58■■□□□ 1.85
CIRBP-220ENST00000588917 NFAT5O94916 1531 aa26.57■■□□□ 1.84
CIRBP-220ENST00000588917 CHRNA2Q15822 529 aa26.57■■□□□ 1.84
CIRBP-220ENST00000588917 AMPHP49418 695 aa26.56■■□□□ 1.84
CIRBP-220ENST00000588917 BTG4Q9NY30 223 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms