RNA–Protein interactions for RNA: ENST00000588858.5

C19orf53-204, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 3

Gene C19orf53, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-204ENST00000588858 NPC1L1Q9UHC9 1359 aa11.17□□□□□ -0.62
C19orf53-204ENST00000588858 PIP4K2BP78356 416 aa11.17□□□□□ -0.62
C19orf53-204ENST00000588858 TMC1Q8TDI8 760 aa11.17□□□□□ -0.62
C19orf53-204ENST00000588858 USP54Q70EL1 1684 aa11.17□□□□□ -0.62
C19orf53-204ENST00000588858 ALS2Q96Q42 1657 aa11.17□□□□□ -0.62
C19orf53-204ENST00000588858 MED1Q15648 1581 aaPredicted RBP11.16□□□□□ -0.62
C19orf53-204ENST00000588858 TTC21BQ7Z4L5 1316 aa11.16□□□□□ -0.62
C19orf53-204ENST00000588858 PER1O15534 1290 aaPredicted RBP11.16□□□□□ -0.62
C19orf53-204ENST00000588858 COL22A1Q8NFW1 1626 aaPredicted RBP11.16□□□□□ -0.62
C19orf53-204ENST00000588858 NSD2O96028 1365 aa11.16□□□□□ -0.62
C19orf53-204ENST00000588858 JCADQ9P266 1359 aa11.16□□□□□ -0.62
C19orf53-204ENST00000588858 PHLPP1O60346 1717 aa11.15□□□□□ -0.62
C19orf53-204ENST00000588858 CARD14Q9BXL6 1004 aa11.15□□□□□ -0.62
C19orf53-204ENST00000588858 USP19O94966 1318 aa11.14□□□□□ -0.63
C19orf53-204ENST00000588858 HSPA1LP34931 641 aa11.14□□□□□ -0.63
C19orf53-204ENST00000588858 PANK3Q9H999 370 aa11.14□□□□□ -0.63
C19orf53-204ENST00000588858 PNPLA6Q8IY17 1366 aa11.14□□□□□ -0.63
C19orf53-204ENST00000588858 SHPRHQ149N8 1683 aa11.14□□□□□ -0.63
C19orf53-204ENST00000588858 OVOS2A0A0J9YW53 1432 aa11.13□□□□□ -0.63
C19orf53-204ENST00000588858 OVOS2Q6IE36 1432 aa11.13□□□□□ -0.63
C19orf53-204ENST00000588858 NSD3Q9BZ95 1437 aa11.13□□□□□ -0.63
C19orf53-204ENST00000588858 CGNL1Q0VF96 1302 aa11.12□□□□□ -0.63
C19orf53-204ENST00000588858 SCAF1Q9H7N4 1312 aaKnown RBP11.12□□□□□ -0.63
C19orf53-204ENST00000588858 DDX17Q92841 729 aaKnown RBP11.12□□□□□ -0.63
C19orf53-204ENST00000588858 SPATA31A6Q5VVP1 1343 aa11.11□□□□□ -0.63
C19orf53-204ENST00000588858 PIK3C2AO00443 1686 aa11.11□□□□□ -0.63
C19orf53-204ENST00000588858 SLIT3O75094 1523 aa11.11□□□□□ -0.63
C19orf53-204ENST00000588858 FYB1O15117 783 aa11.11□□□□□ -0.63
C19orf53-204ENST00000588858 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
C19orf53-204ENST00000588858 NLRP13Q86W25 1043 aa11.11□□□□□ -0.63
C19orf53-204ENST00000588858 KNSTRNQ9Y448 316 aa11.1□□□□□ -0.63
C19orf53-204ENST00000588858 CRYBG1Q9Y4K1 1723 aa11.09□□□□□ -0.63
C19orf53-204ENST00000588858 CPDO75976 1380 aa11.09□□□□□ -0.63
C19orf53-204ENST00000588858 XPCQ01831 940 aaPredicted RBP11.09□□□□□ -0.63
C19orf53-204ENST00000588858 ABTB2Q8N961 1025 aa11.09□□□□□ -0.63
C19orf53-204ENST00000588858 POLR3GLQ9BT43 218 aa11.09□□□□□ -0.63
C19orf53-204ENST00000588858 AATKQ6ZMQ8 1374 aa11.08□□□□□ -0.64
C19orf53-204ENST00000588858 NLRP6P59044 892 aa11.08□□□□□ -0.64
C19orf53-204ENST00000588858 NME9Q86XW9 330 aa11.08□□□□□ -0.64
C19orf53-204ENST00000588858 KCNH5Q8NCM2 988 aa11.08□□□□□ -0.64
C19orf53-204ENST00000588858 MARF1Q9Y4F3 1742 aaKnown RBP11.08□□□□□ -0.64
C19orf53-204ENST00000588858 ABCC6O95255 1503 aa11.08□□□□□ -0.64
C19orf53-204ENST00000588858 KIF24Q5T7B8 1368 aa11.07□□□□□ -0.64
C19orf53-204ENST00000588858 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
C19orf53-204ENST00000588858 COG3Q96JB2 828 aa11.07□□□□□ -0.64
C19orf53-204ENST00000588858 KIF20BQ96Q89 1820 aa11.07□□□□□ -0.64
C19orf53-204ENST00000588858 ANKRD26Q9UPS8 1709 aa11.06□□□□□ -0.64
C19orf53-204ENST00000588858 NFAT5O94916 1531 aa11.06□□□□□ -0.64
C19orf53-204ENST00000588858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.06□□□□□ -0.64
C19orf53-204ENST00000588858 ABCA3Q99758 1704 aa11.06□□□□□ -0.64
C19orf53-204ENST00000588858 PHRF1Q9P1Y6 1649 aaKnown RBP11.06□□□□□ -0.64
C19orf53-204ENST00000588858 GCP02774 474 aa11.05□□□□□ -0.64
C19orf53-204ENST00000588858 DDX10Q13206 875 aaKnown RBP11.05□□□□□ -0.64
C19orf53-204ENST00000588858 SMG6Q86US8 1419 aaKnown RBP11.04□□□□□ -0.64
C19orf53-204ENST00000588858 ILDR1Q86SU0 546 aaPredicted RBP11.04□□□□□ -0.64
C19orf53-204ENST00000588858 GGNBP2Q9H3C7 697 aa11.04□□□□□ -0.64
C19orf53-204ENST00000588858 RTL1A6NKG5 1358 aa11.03□□□□□ -0.64
C19orf53-204ENST00000588858 PARD3Q8TEW0 1356 aa11.03□□□□□ -0.64
C19orf53-204ENST00000588858 ARHGEF25Q86VW2 580 aa11.03□□□□□ -0.64
C19orf53-204ENST00000588858 LRP6O75581 1613 aa11.02□□□□□ -0.64
C19orf53-204ENST00000588858 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
C19orf53-204ENST00000588858 ZRANB1Q9UGI0 708 aa11.02□□□□□ -0.65
C19orf53-204ENST00000588858 INSRP06213 1382 aa11.02□□□□□ -0.65
C19orf53-204ENST00000588858 RALBP1Q15311 655 aa11.01□□□□□ -0.65
C19orf53-204ENST00000588858 SLIT2O94813 1529 aa11□□□□□ -0.65
C19orf53-204ENST00000588858 NUTM2GQ5VZR2 741 aa11□□□□□ -0.65
C19orf53-204ENST00000588858 MORC1Q86VD1 984 aa11□□□□□ -0.65
C19orf53-204ENST00000588858 FNBP4Q8N3X1 1017 aaPredicted RBP11□□□□□ -0.65
C19orf53-204ENST00000588858 CABLES1Q8TDN4 633 aa11□□□□□ -0.65
C19orf53-204ENST00000588858 KIAA0232Q92628 1395 aa11□□□□□ -0.65
C19orf53-204ENST00000588858 BLMP54132 1417 aaPredicted RBP11□□□□□ -0.65
C19orf53-204ENST00000588858 LMO7Q8WWI1 1683 aa10.99□□□□□ -0.65
C19orf53-204ENST00000588858 COL18A1P39060 1754 aa10.99□□□□□ -0.65
C19orf53-204ENST00000588858 COL14A1Q05707 1796 aaKnown RBP10.99□□□□□ -0.65
C19orf53-204ENST00000588858 MAP3K19Q56UN5 1328 aa10.99□□□□□ -0.65
C19orf53-204ENST00000588858 IP6K1Q92551 441 aa10.98□□□□□ -0.65
C19orf53-204ENST00000588858 PRKRIP1Q9H875 184 aaPredicted RBP10.98□□□□□ -0.65
C19orf53-204ENST00000588858 POLKQ9UBT6 870 aa10.98□□□□□ -0.65
C19orf53-204ENST00000588858 FLT4P35916 1363 aa10.98□□□□□ -0.65
C19orf53-204ENST00000588858 CDK12Q9NYV4 1490 aaPredicted RBP10.98□□□□□ -0.65
C19orf53-204ENST00000588858 NWD2Q9ULI1 1742 aa10.98□□□□□ -0.65
C19orf53-204ENST00000588858 FAM83GA6ND36 823 aa10.97□□□□□ -0.65
C19orf53-204ENST00000588858 HAP1P54257 671 aaPredicted RBP10.97□□□□□ -0.65
C19orf53-204ENST00000588858 PRDM11Q9NQV5 511 aa10.97□□□□□ -0.65
C19orf53-204ENST00000588858 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.96□□□□□ -0.65
C19orf53-204ENST00000588858 CC2D1BQ5T0F9 858 aaKnown RBP10.96□□□□□ -0.65
C19orf53-204ENST00000588858 CAMTA1Q9Y6Y1 1673 aa10.95□□□□□ -0.66
C19orf53-204ENST00000588858 BCL9LQ86UU0 1499 aa10.95□□□□□ -0.66
C19orf53-204ENST00000588858 PLEKHG2Q9H7P9 1386 aa10.95□□□□□ -0.66
C19orf53-204ENST00000588858 MYBBP1AQ9BQG0 1328 aaKnown RBP10.95□□□□□ -0.66
C19orf53-204ENST00000588858 HOXC9P31274 260 aa10.95□□□□□ -0.66
C19orf53-204ENST00000588858 ZC3H6P61129 1189 aaKnown RBP10.95□□□□□ -0.66
C19orf53-204ENST00000588858 COL5A2P05997 1499 aaPredicted RBP10.94□□□□□ -0.66
C19orf53-204ENST00000588858 NCAPD2Q15021 1401 aa10.94□□□□□ -0.66
C19orf53-204ENST00000588858 ERBB3P21860 1342 aa10.94□□□□□ -0.66
C19orf53-204ENST00000588858 NUTM2BA6NNL0 878 aaPredicted RBP10.94□□□□□ -0.66
C19orf53-204ENST00000588858 NUTM2EB1AL46 878 aaPredicted RBP10.94□□□□□ -0.66
C19orf53-204ENST00000588858 PPP2R1AP30153 589 aa10.94□□□□□ -0.66
C19orf53-204ENST00000588858 NUTM2AQ8IVF1 878 aaPredicted RBP10.94□□□□□ -0.66
C19orf53-204ENST00000588858 LTN1O94822 1766 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms