RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 DEFB132Q7Z7B7 95 aa27.13■■□□□ 1.93
CCDC43-204ENST00000588687 KDM2AQ9Y2K7 1162 aa27.11■■□□□ 1.93
CCDC43-204ENST00000588687 KRT27Q7Z3Y8 459 aa27.1■■□□□ 1.93
CCDC43-204ENST00000588687 STAC3Q96MF2 364 aa27.1■■□□□ 1.93
CCDC43-204ENST00000588687 KIAA1210Q9ULL0 1709 aa27.09■■□□□ 1.93
CCDC43-204ENST00000588687 BTG4Q9NY30 223 aa27.08■■□□□ 1.93
CCDC43-204ENST00000588687 CCDC9Q9Y3X0 531 aaKnown RBP27.08■■□□□ 1.93
CCDC43-204ENST00000588687 LRP5O75197 1615 aa27.07■■□□□ 1.92
CCDC43-204ENST00000588687 HRCP23327 699 aa27.06■■□□□ 1.92
CCDC43-204ENST00000588687 RGPD1P0DJD0 1748 aa27.05■■□□□ 1.92
CCDC43-204ENST00000588687 TNS1Q9HBL0 1735 aaKnown RBP27.05■■□□□ 1.92
CCDC43-204ENST00000588687 FAM98CQ17RN3 349 aaKnown RBP27.04■■□□□ 1.92
CCDC43-204ENST00000588687 SPATA31A5Q5VU36 1347 aa27.03■■□□□ 1.92
CCDC43-204ENST00000588687 SPATA31A7Q8IWB4 1347 aa27.03■■□□□ 1.92
CCDC43-204ENST00000588687 NRKQ7Z2Y5 1582 aa27.01■■□□□ 1.92
CCDC43-204ENST00000588687 POLR3AO14802 1390 aaPredicted RBP27.01■■□□□ 1.91
CCDC43-204ENST00000588687 NGDNQ8NEJ9 315 aaKnown RBP27.01■■□□□ 1.91
CCDC43-204ENST00000588687 NUDT16Q96DE0 195 aaKnown RBP27■■□□□ 1.91
CCDC43-204ENST00000588687 SF3B2Q13435 895 aaKnown RBP26.99■■□□□ 1.91
CCDC43-204ENST00000588687 KIAA0232Q92628 1395 aa26.98■■□□□ 1.91
CCDC43-204ENST00000588687 DISP2A7MBM2 1401 aa26.98■■□□□ 1.91
CCDC43-204ENST00000588687 LMO7Q8WWI1 1683 aa26.96■■□□□ 1.91
CCDC43-204ENST00000588687 PAK3O75914 559 aaPredicted RBP26.96■■□□□ 1.91
CCDC43-204ENST00000588687 PRDM11Q9NQV5 511 aa26.96■■□□□ 1.91
CCDC43-204ENST00000588687 A0A0G2JS52 829 aa26.95■■□□□ 1.9
CCDC43-204ENST00000588687 MYT1Q01538 1121 aa26.95■■□□□ 1.9
CCDC43-204ENST00000588687 SPATA31A1Q5TZJ5 1347 aa26.93■■□□□ 1.9
CCDC43-204ENST00000588687 CDK19Q9BWU1 502 aa26.93■■□□□ 1.9
CCDC43-204ENST00000588687 FAM182BQ5T319 152 aa26.92■■□□□ 1.9
CCDC43-204ENST00000588687 BAG6P46379 1132 aa26.91■■□□□ 1.9
CCDC43-204ENST00000588687 ACEP12821 1306 aa26.9■■□□□ 1.9
CCDC43-204ENST00000588687 CHRNA2Q15822 529 aa26.9■■□□□ 1.9
CCDC43-204ENST00000588687 CAMTA1Q9Y6Y1 1673 aa26.89■■□□□ 1.9
CCDC43-204ENST00000588687 PLEKHG3A1L390 1219 aa26.89■■□□□ 1.9
CCDC43-204ENST00000588687 USP19O94966 1318 aa26.89■■□□□ 1.89
CCDC43-204ENST00000588687 CCDC61Q9Y6R9 512 aa26.88■■□□□ 1.89
CCDC43-204ENST00000588687 SSH2Q76I76 1423 aa26.88■■□□□ 1.89
CCDC43-204ENST00000588687 QRICH2Q9H0J4 1663 aa26.88■■□□□ 1.89
CCDC43-204ENST00000588687 NBPF1Q3BBV0 1214 aa26.87■■□□□ 1.89
CCDC43-204ENST00000588687 NBPF8Q3BBV2 869 aa26.87■■□□□ 1.89
CCDC43-204ENST00000588687 CPDO75976 1380 aa26.86■■□□□ 1.89
CCDC43-204ENST00000588687 EN1Q05925 392 aaPredicted RBP26.85■■□□□ 1.89
CCDC43-204ENST00000588687 NUTM2GQ5VZR2 741 aa26.85■■□□□ 1.89
CCDC43-204ENST00000588687 PSDA5PKW4 1024 aaPredicted RBP26.84■■□□□ 1.89
CCDC43-204ENST00000588687 ZC3H6P61129 1189 aaKnown RBP26.84■■□□□ 1.89
CCDC43-204ENST00000588687 RREB1Q92766 1687 aa26.84■■□□□ 1.89
CCDC43-204ENST00000588687 PPIP5K1Q6PFW1 1433 aa26.82■■□□□ 1.88
CCDC43-204ENST00000588687 STRN4Q9NRL3 753 aa26.82■■□□□ 1.88
CCDC43-204ENST00000588687 PARP4Q9UKK3 1724 aaKnown RBP26.81■■□□□ 1.88
CCDC43-204ENST00000588687 BARGINQ6ZT62 677 aa26.79■■□□□ 1.88
CCDC43-204ENST00000588687 COL5A2P05997 1499 aaPredicted RBP26.79■■□□□ 1.88
CCDC43-204ENST00000588687 SLIT3O75094 1523 aa26.79■■□□□ 1.88
CCDC43-204ENST00000588687 CENPJQ9HC77 1338 aaPredicted RBP26.78■■□□□ 1.88
CCDC43-204ENST00000588687 NUP188Q5SRE5 1749 aa26.78■■□□□ 1.88
CCDC43-204ENST00000588687 PIK3C2AO00443 1686 aa26.77■■□□□ 1.88
CCDC43-204ENST00000588687 TRPM1Q7Z4N2 1603 aa26.76■■□□□ 1.87
CCDC43-204ENST00000588687 USP6P35125 1406 aa26.76■■□□□ 1.87
CCDC43-204ENST00000588687 LARP1Q6PKG0 1096 aaKnown RBP26.76■■□□□ 1.87
CCDC43-204ENST00000588687 ABTB2Q8N961 1025 aa26.76■■□□□ 1.87
CCDC43-204ENST00000588687 CAMKK2Q96RR4 588 aa26.76■■□□□ 1.87
CCDC43-204ENST00000588687 BRD4O60885 1362 aaPredicted RBP26.75■■□□□ 1.87
CCDC43-204ENST00000588687 EZH2Q15910 746 aaKnown RBP26.75■■□□□ 1.87
CCDC43-204ENST00000588687 FAM196AQ6ZSG2 479 aa26.75■■□□□ 1.87
CCDC43-204ENST00000588687 PEAK1Q9H792 1746 aa26.74■■□□□ 1.87
CCDC43-204ENST00000588687 TRIM37O94972 964 aa26.74■■□□□ 1.87
CCDC43-204ENST00000588687 PARD3Q8TEW0 1356 aa26.73■■□□□ 1.87
CCDC43-204ENST00000588687 R3HDM1Q15032 1099 aaKnown RBP26.73■■□□□ 1.87
CCDC43-204ENST00000588687 CABP2Q9NPB3 220 aa26.73■■□□□ 1.87
CCDC43-204ENST00000588687 USP35Q9P2H5 1018 aa26.73■■□□□ 1.87
CCDC43-204ENST00000588687 COL18A1P39060 1754 aa26.73■■□□□ 1.87
CCDC43-204ENST00000588687 LRRC37A3O60309 1634 aa26.72■■□□□ 1.87
CCDC43-204ENST00000588687 GCP02774 474 aa26.72■■□□□ 1.87
CCDC43-204ENST00000588687 SRPK2P78362 688 aaKnown RBP26.72■■□□□ 1.87
CCDC43-204ENST00000588687 WNK3Q9BYP7 1800 aa26.72■■□□□ 1.87
CCDC43-204ENST00000588687 TCP11L2Q8N4U5 519 aa26.7■■□□□ 1.86
CCDC43-204ENST00000588687 NLRP13Q86W25 1043 aa26.69■■□□□ 1.86
CCDC43-204ENST00000588687 CRB1P82279 1406 aa26.68■■□□□ 1.86
CCDC43-204ENST00000588687 EVA1CP58658 441 aa26.68■■□□□ 1.86
CCDC43-204ENST00000588687 AKAP12Q02952 1782 aa26.68■■□□□ 1.86
CCDC43-204ENST00000588687 THRAP3Q9Y2W1 955 aaKnown RBP26.67■■□□□ 1.86
CCDC43-204ENST00000588687 RGPD3A6NKT7 1758 aaPredicted RBP26.66■■□□□ 1.86
CCDC43-204ENST00000588687 RGPD4Q7Z3J3 1758 aa26.66■■□□□ 1.86
CCDC43-204ENST00000588687 AATKQ6ZMQ8 1374 aa26.66■■□□□ 1.86
CCDC43-204ENST00000588687 SBF2Q86WG5 1849 aa26.65■■□□□ 1.86
CCDC43-204ENST00000588687 APBA3O96018 575 aa26.65■■□□□ 1.86
CCDC43-204ENST00000588687 L3MBTL2Q969R5 705 aa26.65■■□□□ 1.86
CCDC43-204ENST00000588687 CABP1Q9NZU7 370 aa26.65■■□□□ 1.86
CCDC43-204ENST00000588687 PDE3BQ13370 1112 aa26.64■■□□□ 1.86
CCDC43-204ENST00000588687 CPSF1Q10570 1443 aaKnown RBP26.61■■□□□ 1.85
CCDC43-204ENST00000588687 OVOS2A0A0G2JMS6 1433 aa26.6■■□□□ 1.85
CCDC43-204ENST00000588687 OVOS2A0A0J9YW53 1432 aa26.6■■□□□ 1.85
CCDC43-204ENST00000588687 OVOS2Q6IE36 1432 aa26.6■■□□□ 1.85
CCDC43-204ENST00000588687 NFAT5O94916 1531 aa26.59■■□□□ 1.85
CCDC43-204ENST00000588687 RGPD5Q99666 1765 aa26.58■■□□□ 1.85
CCDC43-204ENST00000588687 NLRP6P59044 892 aa26.58■■□□□ 1.85
CCDC43-204ENST00000588687 MON2Q7Z3U7 1717 aa26.58■■□□□ 1.85
CCDC43-204ENST00000588687 EVC2Q86UK5 1308 aa26.57■■□□□ 1.84
CCDC43-204ENST00000588687 USP54Q70EL1 1684 aa26.56■■□□□ 1.84
CCDC43-204ENST00000588687 AXIN2Q9Y2T1 843 aa26.55■■□□□ 1.84
CCDC43-204ENST00000588687 SIN3AQ96ST3 1273 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms