RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 BRINP3Q76B58 766 aa30.84■■■□□ 2.53
ACTN4-210ENST00000588618 PARD3Q8TEW0 1356 aa30.84■■■□□ 2.53
ACTN4-210ENST00000588618 NPHP3Q7Z494 1330 aa30.82■■■□□ 2.52
ACTN4-210ENST00000588618 TTC21BQ7Z4L5 1316 aa30.82■■■□□ 2.52
ACTN4-210ENST00000588618 FYB1O15117 783 aa30.81■■■□□ 2.52
ACTN4-210ENST00000588618 TRPM3Q9HCF6 1732 aaPredicted RBP30.81■■■□□ 2.52
ACTN4-210ENST00000588618 PIK3C2AO00443 1686 aa30.79■■■□□ 2.52
ACTN4-210ENST00000588618 PAK3O75914 559 aaPredicted RBP30.79■■■□□ 2.52
ACTN4-210ENST00000588618 DDX17Q92841 729 aaKnown RBP30.79■■■□□ 2.52
ACTN4-210ENST00000588618 BRD4O60885 1362 aaPredicted RBP30.79■■■□□ 2.52
ACTN4-210ENST00000588618 UBAP1LF5GYI3 381 aa30.78■■■□□ 2.52
ACTN4-210ENST00000588618 NME9Q86XW9 330 aa30.78■■■□□ 2.52
ACTN4-210ENST00000588618 NSD2O96028 1365 aa30.78■■■□□ 2.52
ACTN4-210ENST00000588618 GGNBP2Q9H3C7 697 aa30.78■■■□□ 2.52
ACTN4-210ENST00000588618 XPCQ01831 940 aaPredicted RBP30.77■■■□□ 2.52
ACTN4-210ENST00000588618 TTC21AQ8NDW8 1320 aa30.77■■■□□ 2.52
ACTN4-210ENST00000588618 KRT28Q7Z3Y7 464 aa30.76■■■□□ 2.52
ACTN4-210ENST00000588618 ZRANB1Q9UGI0 708 aa30.76■■■□□ 2.52
ACTN4-210ENST00000588618 ROBO1Q9Y6N7 1651 aa30.75■■■□□ 2.51
ACTN4-210ENST00000588618 MARF1Q9Y4F3 1742 aaKnown RBP30.75■■■□□ 2.51
ACTN4-210ENST00000588618 NHSL1Q5SYE7 1610 aa30.74■■■□□ 2.51
ACTN4-210ENST00000588618 SCAF1Q9H7N4 1312 aaKnown RBP30.74■■■□□ 2.51
ACTN4-210ENST00000588618 RALBP1Q15311 655 aa30.73■■■□□ 2.51
ACTN4-210ENST00000588618 PXDNQ92626 1479 aa30.73■■■□□ 2.51
ACTN4-210ENST00000588618 PIP4K2BP78356 416 aa30.72■■■□□ 2.51
ACTN4-210ENST00000588618 MORC1Q86VD1 984 aa30.71■■■□□ 2.51
ACTN4-210ENST00000588618 OVOS2A0A0J9YW53 1432 aa30.7■■■□□ 2.5
ACTN4-210ENST00000588618 OVOS2Q6IE36 1432 aa30.7■■■□□ 2.5
ACTN4-210ENST00000588618 USP54Q70EL1 1684 aa30.7■■■□□ 2.5
ACTN4-210ENST00000588618 ALS2Q96Q42 1657 aa30.7■■■□□ 2.5
ACTN4-210ENST00000588618 ABTB2Q8N961 1025 aa30.7■■■□□ 2.5
ACTN4-210ENST00000588618 COG3Q96JB2 828 aa30.69■■■□□ 2.5
ACTN4-210ENST00000588618 LMOD2Q6P5Q4 547 aa30.68■■■□□ 2.5
ACTN4-210ENST00000588618 CCDC184Q52MB2 194 aa30.67■■■□□ 2.5
ACTN4-210ENST00000588618 MYBBP1AQ9BQG0 1328 aaKnown RBP30.66■■■□□ 2.5
ACTN4-210ENST00000588618 SBNO1A3KN83 1393 aa30.65■■■□□ 2.5
ACTN4-210ENST00000588618 TNNT2P45379 298 aaPredicted RBP30.64■■■□□ 2.5
ACTN4-210ENST00000588618 NLRP6P59044 892 aa30.64■■■□□ 2.5
ACTN4-210ENST00000588618 USP31Q70CQ4 1352 aa30.64■■■□□ 2.5
ACTN4-210ENST00000588618 PPP2R1AP30153 589 aa30.64■■■□□ 2.5
ACTN4-210ENST00000588618 SOS2Q07890 1332 aaPredicted RBP30.63■■■□□ 2.49
ACTN4-210ENST00000588618 NUTM2GQ5VZR2 741 aa30.62■■■□□ 2.49
ACTN4-210ENST00000588618 AHDC1Q5TGY3 1603 aaPredicted RBP30.61■■■□□ 2.49
ACTN4-210ENST00000588618 MAP2P11137 1827 aaKnown RBP30.6■■■□□ 2.49
ACTN4-210ENST00000588618 CCER2I3L3R5 266 aa30.6■■■□□ 2.49
ACTN4-210ENST00000588618 FBLN1P23142 703 aa30.6■■■□□ 2.49
ACTN4-210ENST00000588618 NLRP13Q86W25 1043 aa30.6■■■□□ 2.49
ACTN4-210ENST00000588618 TNS3Q68CZ2 1445 aa30.6■■■□□ 2.49
ACTN4-210ENST00000588618 SPATA31A3Q5VYP0 1347 aa30.58■■■□□ 2.49
ACTN4-210ENST00000588618 ARHGEF10O15013 1369 aa30.57■■■□□ 2.49
ACTN4-210ENST00000588618 CRYBG1Q9Y4K1 1723 aa30.54■■■□□ 2.48
ACTN4-210ENST00000588618 MED1Q15648 1581 aaPredicted RBP30.53■■■□□ 2.48
ACTN4-210ENST00000588618 LRRC59Q96AG4 307 aaKnown RBP30.53■■■□□ 2.48
ACTN4-210ENST00000588618 PHLPP1O60346 1717 aa30.52■■■□□ 2.48
ACTN4-210ENST00000588618 SOX12O15370 315 aa30.52■■■□□ 2.48
ACTN4-210ENST00000588618 PLEKHG5O94827 1062 aa30.52■■■□□ 2.48
ACTN4-210ENST00000588618 SLIT3O75094 1523 aa30.51■■■□□ 2.47
ACTN4-210ENST00000588618 AATKQ6ZMQ8 1374 aa30.51■■■□□ 2.47
ACTN4-210ENST00000588618 COL16A1Q07092 1604 aaPredicted RBP30.5■■■□□ 2.47
ACTN4-210ENST00000588618 MRS2Q9HD23 443 aa30.5■■■□□ 2.47
ACTN4-210ENST00000588618 NFAT5O94916 1531 aa30.5■■■□□ 2.47
ACTN4-210ENST00000588618 USP19O94966 1318 aa30.49■■■□□ 2.47
ACTN4-210ENST00000588618 KCNH5Q8NCM2 988 aa30.49■■■□□ 2.47
ACTN4-210ENST00000588618 PHRF1Q9P1Y6 1649 aaKnown RBP30.49■■■□□ 2.47
ACTN4-210ENST00000588618 MTHFSP49914 203 aa30.48■■■□□ 2.47
ACTN4-210ENST00000588618 POLKQ9UBT6 870 aa30.47■■■□□ 2.47
ACTN4-210ENST00000588618 PEAK1Q9H792 1746 aa30.47■■■□□ 2.47
ACTN4-210ENST00000588618 SMG6Q86US8 1419 aaKnown RBP30.47■■■□□ 2.47
ACTN4-210ENST00000588618 RRS1Q15050 365 aaKnown RBP30.47■■■□□ 2.47
ACTN4-210ENST00000588618 EMILIN1Q9Y6C2 1016 aa30.46■■■□□ 2.47
ACTN4-210ENST00000588618 LTN1O94822 1766 aa30.45■■■□□ 2.46
ACTN4-210ENST00000588618 ABCA3Q99758 1704 aa30.45■■■□□ 2.46
ACTN4-210ENST00000588618 PPM1GO15355 546 aaPredicted RBP30.43■■■□□ 2.46
ACTN4-210ENST00000588618 HAP1P54257 671 aaPredicted RBP30.43■■■□□ 2.46
ACTN4-210ENST00000588618 GCP02774 474 aa30.42■■■□□ 2.46
ACTN4-210ENST00000588618 COL3A1P02461 1466 aaPredicted RBP30.42■■■□□ 2.46
ACTN4-210ENST00000588618 SHPRHQ149N8 1683 aa30.42■■■□□ 2.46
ACTN4-210ENST00000588618 CABLES1Q8TDN4 633 aa30.42■■■□□ 2.46
ACTN4-210ENST00000588618 CFAP53Q96M91 514 aa30.41■■■□□ 2.46
ACTN4-210ENST00000588618 MAP3K19Q56UN5 1328 aa30.4■■■□□ 2.46
ACTN4-210ENST00000588618 PNPLA6Q8IY17 1366 aa30.38■■■□□ 2.45
ACTN4-210ENST00000588618 CDK12Q9NYV4 1490 aaPredicted RBP30.38■■■□□ 2.45
ACTN4-210ENST00000588618 COL22A1Q8NFW1 1626 aaPredicted RBP30.37■■■□□ 2.45
ACTN4-210ENST00000588618 PNISRQ8TF01 805 aaKnown RBP30.37■■■□□ 2.45
ACTN4-210ENST00000588618 ZBTB7CA1YPR0 619 aa30.36■■■□□ 2.45
ACTN4-210ENST00000588618 AMPHP49418 695 aa30.36■■■□□ 2.45
ACTN4-210ENST00000588618 INSRP06213 1382 aa30.34■■■□□ 2.45
ACTN4-210ENST00000588618 ZC3H6P61129 1189 aaKnown RBP30.32■■■□□ 2.44
ACTN4-210ENST00000588618 HSPA1LP34931 641 aa30.3■■■□□ 2.44
ACTN4-210ENST00000588618 ARHGEF25Q86VW2 580 aa30.3■■■□□ 2.44
ACTN4-210ENST00000588618 FAM9BQ8IZU0 186 aa30.3■■■□□ 2.44
ACTN4-210ENST00000588618 FLT4P35916 1363 aa30.3■■■□□ 2.44
ACTN4-210ENST00000588618 KIF24Q5T7B8 1368 aa30.3■■■□□ 2.44
ACTN4-210ENST00000588618 JCADQ9P266 1359 aa30.29■■■□□ 2.44
ACTN4-210ENST00000588618 HSP90AB2PQ58FF8 381 aa30.29■■■□□ 2.44
ACTN4-210ENST00000588618 COL18A1P39060 1754 aa30.28■■■□□ 2.44
ACTN4-210ENST00000588618 RGPD5Q99666 1765 aa30.28■■■□□ 2.44
ACTN4-210ENST00000588618 RTL1A6NKG5 1358 aa30.27■■■□□ 2.44
ACTN4-210ENST00000588618 HOXC9P31274 260 aa30.26■■■□□ 2.43
ACTN4-210ENST00000588618 WDR43Q15061 677 aaKnown RBP eCLIP30.25■■■□□ 2.433e-7■□□□□ 10.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms