RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ZRANB1Q9UGI0 708 aa19.97■□□□□ 0.79
HDAC5-208ENST00000588419 BLMP54132 1417 aaPredicted RBP19.96■□□□□ 0.79
HDAC5-208ENST00000588419 FAM83GA6ND36 823 aa19.96■□□□□ 0.79
HDAC5-208ENST00000588419 CCDC125Q86Z20 511 aa19.95■□□□□ 0.78
HDAC5-208ENST00000588419 BTG4Q9NY30 223 aa19.95■□□□□ 0.78
HDAC5-208ENST00000588419 SF3B2Q13435 895 aaKnown RBP19.94■□□□□ 0.78
HDAC5-208ENST00000588419 STAC3Q96MF2 364 aa19.93■□□□□ 0.78
HDAC5-208ENST00000588419 QRICH2Q9H0J4 1663 aa19.93■□□□□ 0.78
HDAC5-208ENST00000588419 HRCP23327 699 aa19.92■□□□□ 0.78
HDAC5-208ENST00000588419 FAM98CQ17RN3 349 aaKnown RBP19.92■□□□□ 0.78
HDAC5-208ENST00000588419 KRT27Q7Z3Y8 459 aa19.92■□□□□ 0.78
HDAC5-208ENST00000588419 DEFB132Q7Z7B7 95 aa19.92■□□□□ 0.78
HDAC5-208ENST00000588419 NUDT16Q96DE0 195 aaKnown RBP19.92■□□□□ 0.78
HDAC5-208ENST00000588419 RGPD1P0DJD0 1748 aa19.9■□□□□ 0.78
HDAC5-208ENST00000588419 NUTM2GQ5VZR2 741 aa19.9■□□□□ 0.78
HDAC5-208ENST00000588419 PRDM11Q9NQV5 511 aa19.9■□□□□ 0.78
HDAC5-208ENST00000588419 CDK19Q9BWU1 502 aa19.89■□□□□ 0.77
HDAC5-208ENST00000588419 THSD7AQ9UPZ6 1657 aa19.87■□□□□ 0.77
HDAC5-208ENST00000588419 NRKQ7Z2Y5 1582 aa19.87■□□□□ 0.77
HDAC5-208ENST00000588419 KIAA0232Q92628 1395 aa19.86■□□□□ 0.77
HDAC5-208ENST00000588419 CHRNA2Q15822 529 aa19.86■□□□□ 0.77
HDAC5-208ENST00000588419 NBPF1Q3BBV0 1214 aa19.85■□□□□ 0.77
HDAC5-208ENST00000588419 STRN4Q9NRL3 753 aa19.85■□□□□ 0.77
HDAC5-208ENST00000588419 ACEP12821 1306 aa19.84■□□□□ 0.77
HDAC5-208ENST00000588419 ONECUT3O60422 494 aaPredicted RBP19.84■□□□□ 0.77
HDAC5-208ENST00000588419 ZC3H6P61129 1189 aaKnown RBP19.84■□□□□ 0.77
HDAC5-208ENST00000588419 FAM182BQ5T319 152 aa19.84■□□□□ 0.77
HDAC5-208ENST00000588419 TNS1Q9HBL0 1735 aaKnown RBP19.84■□□□□ 0.77
HDAC5-208ENST00000588419 SPATA31A5Q5VU36 1347 aa19.83■□□□□ 0.77
HDAC5-208ENST00000588419 SPATA31A7Q8IWB4 1347 aa19.83■□□□□ 0.77
HDAC5-208ENST00000588419 SRPK2P78362 688 aaKnown RBP19.83■□□□□ 0.77
HDAC5-208ENST00000588419 BAG6P46379 1132 aa19.81■□□□□ 0.76
HDAC5-208ENST00000588419 PPIP5K1Q6PFW1 1433 aa19.81■□□□□ 0.76
HDAC5-208ENST00000588419 POLR3AO14802 1390 aaPredicted RBP19.81■□□□□ 0.76
HDAC5-208ENST00000588419 TRPM1Q7Z4N2 1603 aa19.8■□□□□ 0.76
HDAC5-208ENST00000588419 CENPJQ9HC77 1338 aaPredicted RBP19.8■□□□□ 0.76
HDAC5-208ENST00000588419 USP35Q9P2H5 1018 aa19.8■□□□□ 0.76
HDAC5-208ENST00000588419 CCDC61Q9Y6R9 512 aa19.8■□□□□ 0.76
HDAC5-208ENST00000588419 NBPF8Q3BBV2 869 aa19.79■□□□□ 0.76
HDAC5-208ENST00000588419 ABTB2Q8N961 1025 aa19.79■□□□□ 0.76
HDAC5-208ENST00000588419 CABP2Q9NPB3 220 aa19.78■□□□□ 0.76
HDAC5-208ENST00000588419 ZBTB7CA1YPR0 619 aa19.77■□□□□ 0.76
HDAC5-208ENST00000588419 LMO7Q8WWI1 1683 aa19.77■□□□□ 0.76
HDAC5-208ENST00000588419 SPATA31A1Q5TZJ5 1347 aa19.76■□□□□ 0.75
HDAC5-208ENST00000588419 PSDA5PKW4 1024 aaPredicted RBP19.76■□□□□ 0.75
HDAC5-208ENST00000588419 EVA1CP58658 441 aa19.76■□□□□ 0.75
HDAC5-208ENST00000588419 PLEKHG3A1L390 1219 aa19.75■□□□□ 0.75
HDAC5-208ENST00000588419 LRP5O75197 1615 aa19.75■□□□□ 0.75
HDAC5-208ENST00000588419 SSH2Q76I76 1423 aa19.75■□□□□ 0.75
HDAC5-208ENST00000588419 CAMTA1Q9Y6Y1 1673 aa19.75■□□□□ 0.75
HDAC5-208ENST00000588419 EN1Q05925 392 aaPredicted RBP19.74■□□□□ 0.75
HDAC5-208ENST00000588419 AKAP12Q02952 1782 aa19.72■□□□□ 0.75
HDAC5-208ENST00000588419 PIK3C2AO00443 1686 aa19.72■□□□□ 0.75
HDAC5-208ENST00000588419 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
HDAC5-208ENST00000588419 SRCAPQ6ZRS2 3230 aa19.72■□□□□ 0.75
HDAC5-208ENST00000588419 L3MBTL2Q969R5 705 aa19.72■□□□□ 0.75
HDAC5-208ENST00000588419 SIN3AQ96ST3 1273 aa19.72■□□□□ 0.75
HDAC5-208ENST00000588419 RGPD5Q99666 1765 aa19.71■□□□□ 0.75
HDAC5-208ENST00000588419 NLRP13Q86W25 1043 aa19.71■□□□□ 0.75
HDAC5-208ENST00000588419 USP19O94966 1318 aa19.71■□□□□ 0.75
HDAC5-208ENST00000588419 WNK3Q9BYP7 1800 aa19.7■□□□□ 0.74
HDAC5-208ENST00000588419 LARP1Q6PKG0 1096 aaKnown RBP19.7■□□□□ 0.74
HDAC5-208ENST00000588419 USP6P35125 1406 aa19.69■□□□□ 0.74
HDAC5-208ENST00000588419 PARP4Q9UKK3 1724 aaKnown RBP19.69■□□□□ 0.74
HDAC5-208ENST00000588419 TRIM37O94972 964 aa19.69■□□□□ 0.74
HDAC5-208ENST00000588419 CABP1Q9NZU7 370 aa19.69■□□□□ 0.74
HDAC5-208ENST00000588419 ROCK2O75116 1388 aaKnown RBP19.69■□□□□ 0.74
HDAC5-208ENST00000588419 CPDO75976 1380 aa19.68■□□□□ 0.74
HDAC5-208ENST00000588419 COL5A2P05997 1499 aaPredicted RBP19.67■□□□□ 0.74
HDAC5-208ENST00000588419 GCP02774 474 aa19.67■□□□□ 0.74
HDAC5-208ENST00000588419 PDE3BQ13370 1112 aa19.67■□□□□ 0.74
HDAC5-208ENST00000588419 EZH2Q15910 746 aaKnown RBP19.67■□□□□ 0.74
HDAC5-208ENST00000588419 RREB1Q92766 1687 aa19.67■□□□□ 0.74
HDAC5-208ENST00000588419 NUP188Q5SRE5 1749 aa19.66■□□□□ 0.74
HDAC5-208ENST00000588419 NLRP6P59044 892 aa19.66■□□□□ 0.74
HDAC5-208ENST00000588419 FAM196AQ6ZSG2 479 aa19.66■□□□□ 0.74
HDAC5-208ENST00000588419 EVC2Q86UK5 1308 aa19.66■□□□□ 0.74
HDAC5-208ENST00000588419 SLIT3O75094 1523 aa19.66■□□□□ 0.74
HDAC5-208ENST00000588419 R3HDM1Q15032 1099 aaKnown RBP19.65■□□□□ 0.74
HDAC5-208ENST00000588419 TCP11L2Q8N4U5 519 aa19.65■□□□□ 0.74
HDAC5-208ENST00000588419 DISP2A7MBM2 1401 aa19.65■□□□□ 0.74
HDAC5-208ENST00000588419 LRRC37A3O60309 1634 aa19.65■□□□□ 0.74
HDAC5-208ENST00000588419 BARGINQ6ZT62 677 aa19.64■□□□□ 0.73
HDAC5-208ENST00000588419 SBF2Q86WG5 1849 aa19.63■□□□□ 0.73
HDAC5-208ENST00000588419 COL18A1P39060 1754 aa19.63■□□□□ 0.73
HDAC5-208ENST00000588419 BRD4O60885 1362 aaPredicted RBP19.63■□□□□ 0.73
HDAC5-208ENST00000588419 SOX12O15370 315 aa19.63■□□□□ 0.73
HDAC5-208ENST00000588419 APBA3O96018 575 aa19.63■□□□□ 0.73
HDAC5-208ENST00000588419 MON2Q7Z3U7 1717 aa19.62■□□□□ 0.73
HDAC5-208ENST00000588419 CRB1P82279 1406 aa19.61■□□□□ 0.73
HDAC5-208ENST00000588419 LTN1O94822 1766 aa19.58■□□□□ 0.73
HDAC5-208ENST00000588419 TOM1L2Q6ZVM7 507 aa19.58■□□□□ 0.72
HDAC5-208ENST00000588419 THRAP3Q9Y2W1 955 aaKnown RBP19.58■□□□□ 0.72
HDAC5-208ENST00000588419 CPSF1Q10570 1443 aaKnown RBP19.58■□□□□ 0.72
HDAC5-208ENST00000588419 PEAK1Q9H792 1746 aa19.57■□□□□ 0.72
HDAC5-208ENST00000588419 CAMKK2Q96RR4 588 aa19.57■□□□□ 0.72
HDAC5-208ENST00000588419 AATKQ6ZMQ8 1374 aa19.57■□□□□ 0.72
HDAC5-208ENST00000588419 TTC21BQ7Z4L5 1316 aa19.55■□□□□ 0.72
HDAC5-208ENST00000588419 OVOS2A0A0G2JMS6 1433 aa19.55■□□□□ 0.72
HDAC5-208ENST00000588419 OVOS2A0A0J9YW53 1432 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms