RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 LMOD2Q6P5Q4 547 aa21.31■■□□□ 1
HDAC5-207ENST00000588261 NRAPQ86VF7 1730 aa21.31■■□□□ 1
HDAC5-207ENST00000588261 BLMP54132 1417 aaPredicted RBP21.29■■□□□ 1
HDAC5-207ENST00000588261 SF3B2Q13435 895 aaKnown RBP21.29■■□□□ 1
HDAC5-207ENST00000588261 KIAA1210Q9ULL0 1709 aa21.29■■□□□ 1
HDAC5-207ENST00000588261 ONECUT3O60422 494 aaPredicted RBP21.28■■□□□ 1
HDAC5-207ENST00000588261 NBPF1Q3BBV0 1214 aa21.27■■□□□ 1
HDAC5-207ENST00000588261 SEPT12Q8IYM1 358 aa21.27■■□□□ 1
HDAC5-207ENST00000588261 EIF3AQ14152 1382 aaKnown RBP21.25■□□□□ 0.99
HDAC5-207ENST00000588261 NUDT16Q96DE0 195 aaKnown RBP21.25■□□□□ 0.99
HDAC5-207ENST00000588261 TOPAZ1Q8N9V7 1692 aa21.24■□□□□ 0.99
HDAC5-207ENST00000588261 GPRASP1Q5JY77 1395 aa21.24■□□□□ 0.99
HDAC5-207ENST00000588261 CDK19Q9BWU1 502 aa21.22■□□□□ 0.99
HDAC5-207ENST00000588261 BTG4Q9NY30 223 aa21.22■□□□□ 0.99
HDAC5-207ENST00000588261 CCDC9Q9Y3X0 531 aaKnown RBP21.22■□□□□ 0.99
HDAC5-207ENST00000588261 COL14A1Q05707 1796 aaKnown RBP21.21■□□□□ 0.99
HDAC5-207ENST00000588261 DEFB132Q7Z7B7 95 aa21.21■□□□□ 0.99
HDAC5-207ENST00000588261 NGDNQ8NEJ9 315 aaKnown RBP21.21■□□□□ 0.99
HDAC5-207ENST00000588261 TRPM1Q7Z4N2 1603 aa21.2■□□□□ 0.98
HDAC5-207ENST00000588261 ITSN1Q15811 1721 aa21.2■□□□□ 0.98
HDAC5-207ENST00000588261 POLR3AO14802 1390 aaPredicted RBP21.2■□□□□ 0.98
HDAC5-207ENST00000588261 KRT27Q7Z3Y8 459 aa21.19■□□□□ 0.98
HDAC5-207ENST00000588261 PHRF1Q9P1Y6 1649 aaKnown RBP21.18■□□□□ 0.98
HDAC5-207ENST00000588261 PAK3O75914 559 aaPredicted RBP21.17■□□□□ 0.98
HDAC5-207ENST00000588261 FAM98CQ17RN3 349 aaKnown RBP21.17■□□□□ 0.98
HDAC5-207ENST00000588261 ACEP12821 1306 aa21.16■□□□□ 0.98
HDAC5-207ENST00000588261 SPATA31A5Q5VU36 1347 aa21.16■□□□□ 0.98
HDAC5-207ENST00000588261 SPATA31A7Q8IWB4 1347 aa21.16■□□□□ 0.98
HDAC5-207ENST00000588261 THSD7AQ9UPZ6 1657 aa21.15■□□□□ 0.98
HDAC5-207ENST00000588261 KIAA0232Q92628 1395 aa21.15■□□□□ 0.98
HDAC5-207ENST00000588261 PLEKHG3A1L390 1219 aa21.15■□□□□ 0.98
HDAC5-207ENST00000588261 NUTM2GQ5VZR2 741 aa21.15■□□□□ 0.98
HDAC5-207ENST00000588261 A0A0G2JS52 829 aa21.14■□□□□ 0.97
HDAC5-207ENST00000588261 BAG6P46379 1132 aa21.14■□□□□ 0.97
HDAC5-207ENST00000588261 MYT1Q01538 1121 aa21.14■□□□□ 0.97
HDAC5-207ENST00000588261 NBPF8Q3BBV2 869 aa21.14■□□□□ 0.97
HDAC5-207ENST00000588261 CHRNA2Q15822 529 aa21.13■□□□□ 0.97
HDAC5-207ENST00000588261 CCDC61Q9Y6R9 512 aa21.13■□□□□ 0.97
HDAC5-207ENST00000588261 NRKQ7Z2Y5 1582 aa21.12■□□□□ 0.97
HDAC5-207ENST00000588261 FAM182BQ5T319 152 aa21.12■□□□□ 0.97
HDAC5-207ENST00000588261 PRDM11Q9NQV5 511 aa21.12■□□□□ 0.97
HDAC5-207ENST00000588261 LRP5O75197 1615 aa21.11■□□□□ 0.97
HDAC5-207ENST00000588261 ZC3H6P61129 1189 aaKnown RBP21.09■□□□□ 0.97
HDAC5-207ENST00000588261 CABP2Q9NPB3 220 aa21.09■□□□□ 0.97
HDAC5-207ENST00000588261 ROCK2O75116 1388 aaKnown RBP21.09■□□□□ 0.97
HDAC5-207ENST00000588261 USP19O94966 1318 aa21.08■□□□□ 0.97
HDAC5-207ENST00000588261 SPATA31A1Q5TZJ5 1347 aa21.08■□□□□ 0.97
HDAC5-207ENST00000588261 CENPJQ9HC77 1338 aaPredicted RBP21.08■□□□□ 0.97
HDAC5-207ENST00000588261 PPIP5K1Q6PFW1 1433 aa21.08■□□□□ 0.97
HDAC5-207ENST00000588261 LMO7Q8WWI1 1683 aa21.08■□□□□ 0.96
HDAC5-207ENST00000588261 QRICH2Q9H0J4 1663 aa21.08■□□□□ 0.96
HDAC5-207ENST00000588261 CAMTA1Q9Y6Y1 1673 aa21.08■□□□□ 0.96
HDAC5-207ENST00000588261 RGPD1P0DJD0 1748 aa21.07■□□□□ 0.96
HDAC5-207ENST00000588261 ZEB1P37275 1124 aaPredicted RBP21.06■□□□□ 0.96
HDAC5-207ENST00000588261 SSH2Q76I76 1423 aa21.04■□□□□ 0.96
HDAC5-207ENST00000588261 CPDO75976 1380 aa21.03■□□□□ 0.96
HDAC5-207ENST00000588261 SRPK2P78362 688 aaKnown RBP21.03■□□□□ 0.96
HDAC5-207ENST00000588261 ABTB2Q8N961 1025 aa21.03■□□□□ 0.96
HDAC5-207ENST00000588261 STRN4Q9NRL3 753 aa21.03■□□□□ 0.96
HDAC5-207ENST00000588261 TNS1Q9HBL0 1735 aaKnown RBP21.03■□□□□ 0.96
HDAC5-207ENST00000588261 PSDA5PKW4 1024 aaPredicted RBP21.01■□□□□ 0.95
HDAC5-207ENST00000588261 CABP1Q9NZU7 370 aa21.01■□□□□ 0.95
HDAC5-207ENST00000588261 USP6P35125 1406 aa21.01■□□□□ 0.95
HDAC5-207ENST00000588261 LARP1Q6PKG0 1096 aaKnown RBP21■□□□□ 0.95
HDAC5-207ENST00000588261 EN1Q05925 392 aaPredicted RBP20.99■□□□□ 0.95
HDAC5-207ENST00000588261 CARD11Q9BXL7 1154 aa20.99■□□□□ 0.95
HDAC5-207ENST00000588261 DISP2A7MBM2 1401 aa20.98■□□□□ 0.95
HDAC5-207ENST00000588261 GCP02774 474 aa20.98■□□□□ 0.95
HDAC5-207ENST00000588261 USP35Q9P2H5 1018 aa20.98■□□□□ 0.95
HDAC5-207ENST00000588261 SLIT3O75094 1523 aa20.98■□□□□ 0.95
HDAC5-207ENST00000588261 PIK3C2AO00443 1686 aa20.97■□□□□ 0.95
HDAC5-207ENST00000588261 COL5A2P05997 1499 aaPredicted RBP20.97■□□□□ 0.95
HDAC5-207ENST00000588261 BARGINQ6ZT62 677 aa20.96■□□□□ 0.95
HDAC5-207ENST00000588261 FAM196AQ6ZSG2 479 aa20.94■□□□□ 0.94
HDAC5-207ENST00000588261 NLRP13Q86W25 1043 aa20.94■□□□□ 0.94
HDAC5-207ENST00000588261 COL18A1P39060 1754 aa20.94■□□□□ 0.94
HDAC5-207ENST00000588261 BRD4O60885 1362 aaPredicted RBP20.93■□□□□ 0.94
HDAC5-207ENST00000588261 SBNO2Q9Y2G9 1366 aa20.93■□□□□ 0.94
HDAC5-207ENST00000588261 TRIM37O94972 964 aa20.92■□□□□ 0.94
HDAC5-207ENST00000588261 EZH2Q15910 746 aaKnown RBP20.92■□□□□ 0.94
HDAC5-207ENST00000588261 CAMKK2Q96RR4 588 aa20.92■□□□□ 0.94
HDAC5-207ENST00000588261 EVA1CP58658 441 aa20.91■□□□□ 0.94
HDAC5-207ENST00000588261 R3HDM1Q15032 1099 aaKnown RBP20.91■□□□□ 0.94
HDAC5-207ENST00000588261 TCP11L2Q8N4U5 519 aa20.91■□□□□ 0.94
HDAC5-207ENST00000588261 USP47Q96K76 1375 aa20.91■□□□□ 0.94
HDAC5-207ENST00000588261 EVC2Q86UK5 1308 aa20.9■□□□□ 0.94
HDAC5-207ENST00000588261 NLRP6P59044 892 aa20.9■□□□□ 0.94
HDAC5-207ENST00000588261 AXIN2Q9Y2T1 843 aa20.9■□□□□ 0.94
HDAC5-207ENST00000588261 AKAP12Q02952 1782 aa20.9■□□□□ 0.94
HDAC5-207ENST00000588261 CPSF1Q10570 1443 aaKnown RBP20.89■□□□□ 0.94
HDAC5-207ENST00000588261 AATKQ6ZMQ8 1374 aa20.89■□□□□ 0.93
HDAC5-207ENST00000588261 PARD3Q8TEW0 1356 aa20.89■□□□□ 0.93
HDAC5-207ENST00000588261 TTC21BQ7Z4L5 1316 aa20.88■□□□□ 0.93
HDAC5-207ENST00000588261 PARP4Q9UKK3 1724 aaKnown RBP20.88■□□□□ 0.93
HDAC5-207ENST00000588261 SLC24A1O60721 1099 aa20.88■□□□□ 0.93
HDAC5-207ENST00000588261 PEAK1Q9H792 1746 aa20.87■□□□□ 0.93
HDAC5-207ENST00000588261 CRB1P82279 1406 aa20.87■□□□□ 0.93
HDAC5-207ENST00000588261 PDE3BQ13370 1112 aa20.86■□□□□ 0.93
HDAC5-207ENST00000588261 CD163L1Q9NR16 1453 aa20.86■□□□□ 0.93
HDAC5-207ENST00000588261 LRRC37A3O60309 1634 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms