RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 XPCQ01831 940 aaPredicted RBP19.74■□□□□ 0.75
CCDC43-203ENST00000588210 CABP1Q9NZU7 370 aa19.74■□□□□ 0.75
CCDC43-203ENST00000588210 ACEP12821 1306 aa19.73■□□□□ 0.75
CCDC43-203ENST00000588210 FAM9BQ8IZU0 186 aa19.73■□□□□ 0.75
CCDC43-203ENST00000588210 CDCA8Q53HL2 280 aa19.72■□□□□ 0.75
CCDC43-203ENST00000588210 DISP3Q9P2K9 1392 aa19.71■□□□□ 0.75
CCDC43-203ENST00000588210 SBNO1A3KN83 1393 aa19.7■□□□□ 0.74
CCDC43-203ENST00000588210 SHPRHQ149N8 1683 aa19.7■□□□□ 0.74
CCDC43-203ENST00000588210 SPATA31A3Q5VYP0 1347 aa19.69■□□□□ 0.74
CCDC43-203ENST00000588210 PNPLA6Q8IY17 1366 aa19.69■□□□□ 0.74
CCDC43-203ENST00000588210 SPATA31A6Q5VVP1 1343 aa19.68■□□□□ 0.74
CCDC43-203ENST00000588210 IRX6P78412 446 aaPredicted RBP19.68■□□□□ 0.74
CCDC43-203ENST00000588210 ZNF692Q9BU19 519 aaPredicted RBP19.67■□□□□ 0.74
CCDC43-203ENST00000588210 TMC1Q8TDI8 760 aa19.67■□□□□ 0.74
CCDC43-203ENST00000588210 PPP4R2Q9NY27 417 aa19.67■□□□□ 0.74
CCDC43-203ENST00000588210 NINLQ9Y2I6 1382 aa19.67■□□□□ 0.74
CCDC43-203ENST00000588210 TNS3Q68CZ2 1445 aa19.67■□□□□ 0.74
CCDC43-203ENST00000588210 BRD4O60885 1362 aaPredicted RBP19.66■□□□□ 0.74
CCDC43-203ENST00000588210 TRPM3Q9HCF6 1732 aaPredicted RBP19.66■□□□□ 0.74
CCDC43-203ENST00000588210 SMG6Q86US8 1419 aaKnown RBP19.65■□□□□ 0.74
CCDC43-203ENST00000588210 SLC12A5Q9H2X9 1139 aa19.64■□□□□ 0.74
CCDC43-203ENST00000588210 CPSF1Q10570 1443 aaKnown RBP19.64■□□□□ 0.74
CCDC43-203ENST00000588210 ARHGEF10O15013 1369 aa19.64■□□□□ 0.73
CCDC43-203ENST00000588210 PAK3O75914 559 aaPredicted RBP19.64■□□□□ 0.73
CCDC43-203ENST00000588210 COL22A1Q8NFW1 1626 aaPredicted RBP19.64■□□□□ 0.73
CCDC43-203ENST00000588210 USP6P35125 1406 aa19.63■□□□□ 0.73
CCDC43-203ENST00000588210 LMOD2Q6P5Q4 547 aa19.63■□□□□ 0.73
CCDC43-203ENST00000588210 HDGFL2Q7Z4V5 671 aaPredicted RBP19.62■□□□□ 0.73
CCDC43-203ENST00000588210 TERF2IPQ9NYB0 399 aa19.62■□□□□ 0.73
CCDC43-203ENST00000588210 AKAP12Q02952 1782 aa19.62■□□□□ 0.73
CCDC43-203ENST00000588210 ALS2Q96Q42 1657 aa19.61■□□□□ 0.73
CCDC43-203ENST00000588210 CD163L1Q9NR16 1453 aa19.61■□□□□ 0.73
CCDC43-203ENST00000588210 KTN1Q86UP2 1357 aaKnown RBP19.61■□□□□ 0.73
CCDC43-203ENST00000588210 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
CCDC43-203ENST00000588210 NUTM2BA6NNL0 878 aaPredicted RBP19.59■□□□□ 0.73
CCDC43-203ENST00000588210 NUTM2EB1AL46 878 aaPredicted RBP19.59■□□□□ 0.73
CCDC43-203ENST00000588210 NUTM2AQ8IVF1 878 aaPredicted RBP19.59■□□□□ 0.73
CCDC43-203ENST00000588210 MED1Q15648 1581 aaPredicted RBP19.58■□□□□ 0.73
CCDC43-203ENST00000588210 A0A1W2PP64 1363 aa19.58■□□□□ 0.72
CCDC43-203ENST00000588210 ABTB2Q8N961 1025 aa19.58■□□□□ 0.72
CCDC43-203ENST00000588210 ANKRD36BQ8N2N9 1353 aa19.57■□□□□ 0.72
CCDC43-203ENST00000588210 FANCIQ9NVI1 1328 aa19.57■□□□□ 0.72
CCDC43-203ENST00000588210 MON2Q7Z3U7 1717 aa19.57■□□□□ 0.72
CCDC43-203ENST00000588210 LRP6O75581 1613 aa19.57■□□□□ 0.72
CCDC43-203ENST00000588210 TTC21BQ7Z4L5 1316 aa19.57■□□□□ 0.72
CCDC43-203ENST00000588210 TTC21AQ8NDW8 1320 aa19.56■□□□□ 0.72
CCDC43-203ENST00000588210 POLR3GLQ9BT43 218 aa19.56■□□□□ 0.72
CCDC43-203ENST00000588210 NRKQ7Z2Y5 1582 aa19.55■□□□□ 0.72
CCDC43-203ENST00000588210 MYOM1P52179 1685 aa19.55■□□□□ 0.72
CCDC43-203ENST00000588210 EDC4Q6P2E9 1401 aaKnown RBP19.54■□□□□ 0.72
CCDC43-203ENST00000588210 MEX3CQ5U5Q3 659 aaKnown RBP19.54■□□□□ 0.72
CCDC43-203ENST00000588210 HAP1P54257 671 aaPredicted RBP19.53■□□□□ 0.72
CCDC43-203ENST00000588210 NLRP13Q86W25 1043 aa19.53■□□□□ 0.72
CCDC43-203ENST00000588210 CABLES1Q8TDN4 633 aa19.53■□□□□ 0.72
CCDC43-203ENST00000588210 NUDCQ9Y266 331 aa19.53■□□□□ 0.72
CCDC43-203ENST00000588210 RNF123Q5XPI4 1314 aa19.52■□□□□ 0.72
CCDC43-203ENST00000588210 NUTM2GQ5VZR2 741 aa19.52■□□□□ 0.72
CCDC43-203ENST00000588210 ADAMTS2O95450 1211 aa19.52■□□□□ 0.71
CCDC43-203ENST00000588210 PNISRQ8TF01 805 aaKnown RBP19.52■□□□□ 0.71
CCDC43-203ENST00000588210 PLEKHG5O94827 1062 aa19.51■□□□□ 0.71
CCDC43-203ENST00000588210 NLRP6P59044 892 aa19.51■□□□□ 0.71
CCDC43-203ENST00000588210 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.51■□□□□ 0.71
CCDC43-203ENST00000588210 PIK3C2AO00443 1686 aa19.5■□□□□ 0.71
CCDC43-203ENST00000588210 ABCA3Q99758 1704 aa19.5■□□□□ 0.71
CCDC43-203ENST00000588210 CRYBG1Q9Y4K1 1723 aa19.49■□□□□ 0.71
CCDC43-203ENST00000588210 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
CCDC43-203ENST00000588210 USP19O94966 1318 aa19.49■□□□□ 0.71
CCDC43-203ENST00000588210 MYBBP1AQ9BQG0 1328 aaKnown RBP19.48■□□□□ 0.71
CCDC43-203ENST00000588210 RALBP1Q15311 655 aa19.48■□□□□ 0.71
CCDC43-203ENST00000588210 C8orf37Q96NL8 207 aa19.48■□□□□ 0.71
CCDC43-203ENST00000588210 B4GALNT3Q6L9W6 998 aa19.47■□□□□ 0.71
CCDC43-203ENST00000588210 MARF1Q9Y4F3 1742 aaKnown RBP19.47■□□□□ 0.71
CCDC43-203ENST00000588210 USP31Q70CQ4 1352 aa19.47■□□□□ 0.71
CCDC43-203ENST00000588210 MSH5O43196 834 aa19.47■□□□□ 0.71
CCDC43-203ENST00000588210 PHRF1Q9P1Y6 1649 aaKnown RBP19.46■□□□□ 0.71
CCDC43-203ENST00000588210 NME9Q86XW9 330 aa19.46■□□□□ 0.71
CCDC43-203ENST00000588210 NGLY1Q96IV0 654 aa19.46■□□□□ 0.71
CCDC43-203ENST00000588210 CARD14Q9BXL6 1004 aa19.46■□□□□ 0.71
CCDC43-203ENST00000588210 GCP02774 474 aa19.45■□□□□ 0.7
CCDC43-203ENST00000588210 PANK3Q9H999 370 aa19.45■□□□□ 0.7
CCDC43-203ENST00000588210 SLIT3O75094 1523 aa19.44■□□□□ 0.7
CCDC43-203ENST00000588210 KCNH5Q8NCM2 988 aa19.44■□□□□ 0.7
CCDC43-203ENST00000588210 CNGB1Q14028 1251 aaPredicted RBP19.43■□□□□ 0.7
CCDC43-203ENST00000588210 USP54Q70EL1 1684 aa19.43■□□□□ 0.7
CCDC43-203ENST00000588210 FNBP4Q8N3X1 1017 aaPredicted RBP19.43■□□□□ 0.7
CCDC43-203ENST00000588210 PARD3Q8TEW0 1356 aa19.43■□□□□ 0.7
CCDC43-203ENST00000588210 NSD3Q9BZ95 1437 aa19.43■□□□□ 0.7
CCDC43-203ENST00000588210 AFF2P51816 1311 aa19.42■□□□□ 0.7
CCDC43-203ENST00000588210 RGS17Q9UGC6 210 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-203ENST00000588210 ZRANB1Q9UGI0 708 aa19.42■□□□□ 0.7
CCDC43-203ENST00000588210 FYB1O15117 783 aa19.42■□□□□ 0.7
CCDC43-203ENST00000588210 ZNF772Q68DY9 489 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-203ENST00000588210 FAM83GA6ND36 823 aa19.41■□□□□ 0.7
CCDC43-203ENST00000588210 OVOS2A0A0J9YW53 1432 aa19.41■□□□□ 0.7
CCDC43-203ENST00000588210 OVOS2Q6IE36 1432 aa19.41■□□□□ 0.7
CCDC43-203ENST00000588210 ZC3H6P61129 1189 aaKnown RBP19.4■□□□□ 0.7
CCDC43-203ENST00000588210 COG3Q96JB2 828 aa19.4■□□□□ 0.7
CCDC43-203ENST00000588210 CPDO75976 1380 aa19.4■□□□□ 0.7
CCDC43-203ENST00000588210 KIAA0232Q92628 1395 aa19.4■□□□□ 0.7
CCDC43-203ENST00000588210 PRDM11Q9NQV5 511 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms