RNA–Protein interactions for RNA: ENST00000587975.2

R3HDM4-203, Transcript of R3H domain containing 4, humanhuman

TSL 3 BASIC

Gene R3HDM4, Length 1,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-203ENST00000587975 RRP7AQ9Y3A4 280 aaKnown RBP30.17■■■□□ 2.42
R3HDM4-203ENST00000587975 CPSF1Q10570 1443 aaKnown RBP30.17■■■□□ 2.42
R3HDM4-203ENST00000587975 RARSP54136 660 aaKnown RBP30.16■■■□□ 2.42
R3HDM4-203ENST00000587975 NOP58Q9Y2X3 529 aaKnown RBP30.16■■■□□ 2.42
R3HDM4-203ENST00000587975 NEUROD2Q15784 382 aa30.15■■■□□ 2.42
R3HDM4-203ENST00000587975 IL16Q14005 1332 aa30.15■■■□□ 2.42
R3HDM4-203ENST00000587975 EDC4Q6P2E9 1401 aaKnown RBP30.15■■■□□ 2.42
R3HDM4-203ENST00000587975 WASLO00401 505 aaPredicted RBP30.14■■■□□ 2.42
R3HDM4-203ENST00000587975 WAPLQ7Z5K2 1190 aa30.14■■■□□ 2.42
R3HDM4-203ENST00000587975 METP08581 1390 aa30.14■■■□□ 2.42
R3HDM4-203ENST00000587975 UBR1Q8IWV7 1749 aa30.14■■■□□ 2.41
R3HDM4-203ENST00000587975 SENP3Q9H4L4 574 aaPredicted RBP30.13■■■□□ 2.41
R3HDM4-203ENST00000587975 TMEM2Q9UHN6 1383 aa30.13■■■□□ 2.41
R3HDM4-203ENST00000587975 DIAPH1O60610 1272 aaKnown RBP30.12■■■□□ 2.41
R3HDM4-203ENST00000587975 MAPK8IP3Q9UPT6 1336 aa30.1■■■□□ 2.41
R3HDM4-203ENST00000587975 TMPOP42166 694 aaKnown RBP30.1■■■□□ 2.41
R3HDM4-203ENST00000587975 CANXP27824 592 aaKnown RBP30.08■■■□□ 2.41
R3HDM4-203ENST00000587975 PPIP5K1Q6PFW1 1433 aa30.08■■■□□ 2.41
R3HDM4-203ENST00000587975 U2SURPO15042 1029 aaKnown RBP30.08■■■□□ 2.41
R3HDM4-203ENST00000587975 FCHSD2O94868 740 aa30.06■■■□□ 2.4
R3HDM4-203ENST00000587975 AATKQ6ZMQ8 1374 aa30.06■■■□□ 2.4
R3HDM4-203ENST00000587975 CLUAP1Q96AJ1 413 aa30.05■■■□□ 2.4
R3HDM4-203ENST00000587975 MON2Q7Z3U7 1717 aa30.05■■■□□ 2.4
R3HDM4-203ENST00000587975 PLEKHG1Q9ULL1 1385 aa30.03■■■□□ 2.4
R3HDM4-203ENST00000587975 TRIM35Q9UPQ4 493 aa30.03■■■□□ 2.4
R3HDM4-203ENST00000587975 CCDC61Q9Y6R9 512 aa30.02■■■□□ 2.4
R3HDM4-203ENST00000587975 ADAMTS13Q76LX8 1427 aa30.01■■■□□ 2.4
R3HDM4-203ENST00000587975 POLKQ9UBT6 870 aa30.01■■■□□ 2.39
R3HDM4-203ENST00000587975 CDK12Q9NYV4 1490 aaPredicted RBP30.01■■■□□ 2.39
R3HDM4-203ENST00000587975 ZBTB47Q9UFB7 747 aaPredicted RBP30■■■□□ 2.39
R3HDM4-203ENST00000587975 AKAP12Q02952 1782 aa30■■■□□ 2.39
R3HDM4-203ENST00000587975 NUDT16Q96DE0 195 aaKnown RBP30■■■□□ 2.39
R3HDM4-203ENST00000587975 TXNDC2Q86VQ3 553 aa29.99■■■□□ 2.39
R3HDM4-203ENST00000587975 ZNF692Q9BU19 519 aaPredicted RBP29.99■■■□□ 2.39
R3HDM4-203ENST00000587975 PANK1Q8TE04 598 aa29.98■■■□□ 2.39
R3HDM4-203ENST00000587975 FAM161AQ3B820 660 aa29.97■■■□□ 2.39
R3HDM4-203ENST00000587975 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.97■■■□□ 2.39
R3HDM4-203ENST00000587975 COG6Q9Y2V7 657 aa29.97■■■□□ 2.39
R3HDM4-203ENST00000587975 LRRC7Q96NW7 1537 aa29.97■■■□□ 2.39
R3HDM4-203ENST00000587975 PMFBP1Q8TBY8 1022 aa29.96■■■□□ 2.39
R3HDM4-203ENST00000587975 FRAT1Q92837 279 aaPredicted RBP29.96■■■□□ 2.39
R3HDM4-203ENST00000587975 ITSN1Q15811 1721 aa29.95■■■□□ 2.39
R3HDM4-203ENST00000587975 C3P01024 1663 aa29.95■■■□□ 2.39
R3HDM4-203ENST00000587975 RSPH6AQ9H0K4 717 aa29.95■■■□□ 2.38
R3HDM4-203ENST00000587975 MAP2P11137 1827 aaKnown RBP29.94■■■□□ 2.38
R3HDM4-203ENST00000587975 RIPK4P57078 832 aa29.94■■■□□ 2.38
R3HDM4-203ENST00000587975 NEFMP07197 916 aa29.93■■■□□ 2.38
R3HDM4-203ENST00000587975 ZKSCAN2Q63HK3 967 aa29.92■■■□□ 2.38
R3HDM4-203ENST00000587975 SLIT1O75093 1534 aa29.92■■■□□ 2.38
R3HDM4-203ENST00000587975 ROBO2Q9HCK4 1378 aa29.91■■■□□ 2.38
R3HDM4-203ENST00000587975 PAK3O75914 559 aaPredicted RBP29.91■■■□□ 2.38
R3HDM4-203ENST00000587975 IGHDP01880 384 aa29.91■■■□□ 2.38
R3HDM4-203ENST00000587975 DDRGK1Q96HY6 314 aa29.9■■■□□ 2.38
R3HDM4-203ENST00000587975 ARHGAP23Q9P227 1491 aa29.9■■■□□ 2.38
R3HDM4-203ENST00000587975 TOPAZ1Q8N9V7 1692 aa29.9■■■□□ 2.38
R3HDM4-203ENST00000587975 SKAP1Q86WV1 359 aa29.9■■■□□ 2.38
R3HDM4-203ENST00000587975 ZNF428Q96B54 188 aa29.9■■■□□ 2.38
R3HDM4-203ENST00000587975 COG3Q96JB2 828 aa29.9■■■□□ 2.38
R3HDM4-203ENST00000587975 CALD1Q05682 793 aaKnown RBP29.88■■■□□ 2.37
R3HDM4-203ENST00000587975 EXOSC9Q06265 439 aaKnown RBP29.88■■■□□ 2.37
R3HDM4-203ENST00000587975 RLBP1P12271 317 aa29.87■■■□□ 2.37
R3HDM4-203ENST00000587975 IL13P35225 146 aa29.87■■■□□ 2.37
R3HDM4-203ENST00000587975 C8orf34Q49A92 452 aa29.87■■■□□ 2.37
R3HDM4-203ENST00000587975 MVPQ14764 893 aaKnown RBP29.87■■■□□ 2.37
R3HDM4-203ENST00000587975 NME9Q86XW9 330 aa29.87■■■□□ 2.37
R3HDM4-203ENST00000587975 TSR2Q969E8 191 aaKnown RBP29.86■■■□□ 2.37
R3HDM4-203ENST00000587975 NRKQ7Z2Y5 1582 aa29.85■■■□□ 2.37
R3HDM4-203ENST00000587975 PRKAR2BP31323 418 aa29.85■■■□□ 2.37
R3HDM4-203ENST00000587975 NFE2L2Q16236 605 aa29.85■■■□□ 2.37
R3HDM4-203ENST00000587975 DZIP1LQ8IYY4 767 aaKnown RBP29.85■■■□□ 2.37
R3HDM4-203ENST00000587975 PRR36Q9H6K5 1346 aa29.85■■■□□ 2.37
R3HDM4-203ENST00000587975 PLEKHG3A1L390 1219 aa29.85■■■□□ 2.37
R3HDM4-203ENST00000587975 ALDH1L2Q3SY69 923 aa29.85■■■□□ 2.37
R3HDM4-203ENST00000587975 NPM2Q86SE8 214 aaKnown RBP29.85■■■□□ 2.37
R3HDM4-203ENST00000587975 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.84■■■□□ 2.37
R3HDM4-203ENST00000587975 EID1Q9Y6B2 187 aa29.84■■■□□ 2.37
R3HDM4-203ENST00000587975 DIP2AQ14689 1571 aa29.84■■■□□ 2.37
R3HDM4-203ENST00000587975 LTKP29376 864 aa29.83■■■□□ 2.37
R3HDM4-203ENST00000587975 SMC4Q9NTJ3 1288 aa29.83■■■□□ 2.37
R3HDM4-203ENST00000587975 BRPF1P55201 1214 aaPredicted RBP29.82■■■□□ 2.36
R3HDM4-203ENST00000587975 BCL2L13Q9BXK5 485 aa29.82■■■□□ 2.36
R3HDM4-203ENST00000587975 KIF16BQ96L93 1317 aa29.82■■■□□ 2.36
R3HDM4-203ENST00000587975 RWDD1Q9H446 243 aaPredicted RBP29.82■■■□□ 2.36
R3HDM4-203ENST00000587975 PTCH1Q13635 1447 aa29.81■■■□□ 2.36
R3HDM4-203ENST00000587975 FTSJ3Q8IY81 847 aaKnown RBP29.81■■■□□ 2.36
R3HDM4-203ENST00000587975 EMILIN1Q9Y6C2 1016 aa29.81■■■□□ 2.36
R3HDM4-203ENST00000587975 PPM1GO15355 546 aaPredicted RBP29.8■■■□□ 2.36
R3HDM4-203ENST00000587975 RGS3P49796 1198 aa29.8■■■□□ 2.36
R3HDM4-203ENST00000587975 SSH1Q8WYL5 1049 aa29.8■■■□□ 2.36
R3HDM4-203ENST00000587975 TBX22Q9Y458 520 aa29.8■■■□□ 2.36
R3HDM4-203ENST00000587975 VIRMAQ69YN4 1812 aaKnown RBP29.79■■■□□ 2.36
R3HDM4-203ENST00000587975 LMOD3Q0VAK6 560 aa29.79■■■□□ 2.36
R3HDM4-203ENST00000587975 PCDHB15Q9Y5E8 787 aa29.79■■■□□ 2.36
R3HDM4-203ENST00000587975 IPO8O15397 1037 aaKnown RBP29.78■■■□□ 2.36
R3HDM4-203ENST00000587975 ATF7IPQ6VMQ6 1270 aa29.78■■■□□ 2.36
R3HDM4-203ENST00000587975 PTPRUQ92729 1446 aa29.77■■■□□ 2.36
R3HDM4-203ENST00000587975 DDX19BQ9UMR2 479 aa29.77■■■□□ 2.36
R3HDM4-203ENST00000587975 TNNQ9UQP3 1299 aa29.77■■■□□ 2.36
R3HDM4-203ENST00000587975 OVOS2A0A0J9YW53 1432 aa29.76■■■□□ 2.36
R3HDM4-203ENST00000587975 OVOS2Q6IE36 1432 aa29.76■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms